Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 2.3e-128 462.2 229 100.0
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 6.0e-121 437.6 229 94.8
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 8.7e-120 433.7 229 93.9
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.6e-103 377.9 233 82.8
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.8e-102 374.8 243 78.6
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.4e-98 363.2 236 77.1
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 4.2e-98 361.7 225 79.1
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 7.9e-97 357.5 229 75.5
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 2.3e-96 355.9 230 76.1
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 3.9e-96 355.1 226 77.4
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.1e-95 353.6 227 75.8
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.9e-95 352.8 229 76.4
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 7.4e-95 350.9 229 75.5
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 7.4e-95 350.9 229 75.1
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.3e-94 350.1 229 75.1
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.6e-94 349.7 241 73.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 1.8e-93 346.3 178 93.3
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 3.1e-93 345.5 229 74.7
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 5.3e-93 344.7 226 75.7
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 5.3e-93 344.7 226 75.2
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 9.0e-93 344.0 225 74.7
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.5e-92 343.2 230 75.2
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 2.6e-92 342.4 227 75.3
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 2.6e-92 342.4 228 73.7
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 3.4e-92 342.0 226 73.9
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 5.9e-92 341.3 226 74.8
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.0e-91 340.5 232 72.0
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.3e-91 340.1 231 74.0
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.3e-91 340.1 225 73.8
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.7e-91 339.7 232 73.3
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.2e-91 339.3 229 73.4
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 5.0e-91 338.2 228 74.1
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 6.5e-91 337.8 228 72.8
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 1.1e-90 337.0 224 72.8
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 4.2e-90 335.1 233 71.7
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 5.5e-90 334.7 221 74.7
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 5.5e-90 334.7 226 73.9
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 7.2e-90 334.3 221 73.8
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 9.4e-90 334.0 225 72.4
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.2e-89 333.6 229 71.6
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.6e-89 333.2 221 73.8
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.6e-89 333.2 225 71.6
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 2.1e-89 332.8 233 70.8
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.7e-89 332.4 228 72.8
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 4.6e-89 331.6 226 72.1
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 6.1e-89 331.3 221 73.8
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 6.1e-89 331.3 226 72.1
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.4e-88 330.1 222 73.4
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.8e-88 329.7 228 70.2
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.0e-88 328.9 234 69.2
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 3.0e-88 328.9 228 69.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 5.1e-88 328.2 226 69.5
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 5.1e-88 328.2 221 72.9
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 5.1e-88 328.2 221 72.9
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.1e-88 328.2 230 71.3
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 6.7e-88 327.8 229 70.3
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.1e-87 327.0 233 70.4
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 1.5e-87 326.6 220 74.5
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 2.5e-87 325.9 221 72.4
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 2.5e-87 325.9 233 69.1
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 2.5e-87 325.9 221 72.4
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 4.3e-87 325.1 228 71.5
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 4.3e-87 325.1 228 71.5
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 5.7e-87 324.7 229 69.9
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 5.7e-87 324.7 207 74.9
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.7e-86 323.2 231 70.1
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 3.7e-86 322.0 233 67.8
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 1.4e-85 320.1 221 71.9
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.8e-85 319.7 297 58.9
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 2.4e-85 319.3 273 62.3
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 3.1e-85 318.9 293 60.1
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.3e-85 318.2 237 68.4
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 9.1e-85 317.4 265 63.4
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.5e-84 316.6 228 68.0
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.0e-83 313.9 234 67.9
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.9e-83 312.4 255 64.3
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 3.8e-83 312.0 221 68.8
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.1e-82 310.5 231 67.5
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.2e-82 308.9 223 70.9
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 4.2e-82 308.5 242 64.0
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 2.7e-81 305.8 227 68.3
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 3.6e-81 305.4 231 70.6
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.1e-81 304.7 224 70.1
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 3.0e-80 302.4 222 67.6
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 2.4e-77 292.7 184 73.4
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 5.3e-77 291.6 228 64.0
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 6.5e-75 284.6 195 71.8
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 2.5e-74 282.7 229 65.5
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.5e-74 282.7 224 62.5
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 5.2e-72 275.0 163 78.5
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 7.4e-71 271.2 225 60.9
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.3e-70 270.4 245 60.0
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.4e-69 266.9 235 57.9
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 2.0e-68 263.1 241 57.7
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 7.7e-68 261.2 180 66.1
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.3e-67 260.4 184 66.8
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.7e-67 260.0 185 71.9
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 9.4e-66 254.2 380 42.1
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.6e-65 253.4 189 67.2
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 2.8e-62 242.7 228 56.1
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 3.2e-58 229.2 183 59.0
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 4.8e-54 215.3 155 72.3
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 1.6e-49 200.3 213 46.5
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 9.8e-47 191.0 159 64.2
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 3.2e-45 186.0 151 66.2
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 4.0e-40 169.1 133 68.4
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 4.0e-40 169.1 133 68.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.7e-38 163.7 164 54.3
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 4.6e-36 155.6 218 39.4
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.7e-35 153.7 206 42.7
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 3.6e-33 146.0 138 59.4
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 1.2e-31 141.0 149 54.4
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 9.8e-31 137.9 149 53.7
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 2.2e-22 110.2 82 67.1
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 1.4e-21 107.5 141 44.7
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 6.0e-20 102.1 54 79.6
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 5.1e-19 99.0 99 56.6
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.9e-18 97.1 105 54.3
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 2.8e-17 93.2 97 54.6
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.4e-16 90.9 100 53.0
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.3e-11 74.3 53 64.2
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 1.3e-11 74.3 48 68.8


User provided reference genes

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