Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 7.4e-115 417.2 203 100.0
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 4.4e-83 311.6 203 77.8
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.7e-80 302.4 204 77.9
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.9e-57 226.5 215 60.0
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 2.4e-57 226.1 227 57.3
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 7.3e-54 214.5 215 57.2
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 1.4e-44 183.7 208 51.0
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.5e-43 180.3 215 51.2
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 4.6e-40 168.7 241 44.8
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.2e-32 144.1 208 41.8
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.5e-30 137.1 191 46.6
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.6e-29 133.7 220 42.3
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 6.3e-29 131.7 219 41.1
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 8.2e-29 131.3 211 41.2
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 1.8e-28 130.2 176 44.9
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 2.4e-28 129.8 205 40.0
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 2.0e-27 126.7 214 39.3
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.5e-27 125.6 225 41.3
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.9e-25 120.2 219 38.8
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 1.9e-25 120.2 210 37.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 2.5e-25 119.8 208 39.4
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 3.2e-25 119.4 213 38.0
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 3.2e-25 119.4 222 38.3
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 5.5e-25 118.6 211 39.3
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 2.7e-24 116.3 223 37.2
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 2.3e-23 113.2 218 36.2
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 1.9e-22 110.2 215 38.6
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.3e-22 109.4 216 38.4
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 3.3e-22 109.4 220 37.7
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 4.3e-22 109.0 209 38.8
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 7.4e-22 108.2 203 37.9
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 7.4e-22 108.2 214 39.3
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 1.6e-21 107.1 216 37.5
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 6.3e-21 105.1 212 35.4
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 8.2e-21 104.8 218 33.9
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.1e-20 104.4 155 38.7
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.8e-20 103.6 214 35.5
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.4e-20 103.2 212 34.9
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.1e-20 102.8 212 35.4
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.1e-20 102.8 215 38.6
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 5.3e-20 102.1 212 34.9
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 9.0e-20 101.3 190 37.4
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.0e-19 100.1 212 34.4
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 4.5e-19 99.0 51 80.4
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 5.9e-19 98.6 215 38.1
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 5.9e-19 98.6 216 37.5
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.0e-18 97.8 207 37.2
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 1.0e-18 97.8 210 34.8
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 1.0e-18 97.8 206 35.4
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 1.0e-18 97.8 214 35.0
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 1.7e-18 97.1 209 34.9
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 2.2e-18 96.7 212 34.9
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 5.5e-17 92.0 185 36.8
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 7.2e-17 91.7 215 32.6
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.6e-16 90.5 225 34.7
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 2.1e-16 90.1 220 35.9
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 2.1e-16 90.1 205 33.7
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 3.6e-16 89.4 223 36.8
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 4.6e-16 89.0 212 35.4
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 7.9e-16 88.2 215 34.9
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 3.9e-15 85.9 221 36.2
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 5.1e-15 85.5 212 34.0
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 5.1e-15 85.5 211 33.6
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 8.8e-15 84.7 155 36.1
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 1.1e-14 84.3 207 31.9
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.5e-14 84.0 215 33.0
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 2.0e-14 83.6 215 31.2
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 2.5e-14 83.2 199 35.7
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.5e-14 83.2 213 33.8
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 2.5e-14 83.2 222 32.0
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.7e-13 80.5 212 33.5
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 3.7e-13 79.3 193 33.7
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 6.3e-13 78.6 218 31.2
PGSC0003DMG400044091 Solanum tuberosum HOM05D016660 ORTHO05D006345 6.3e-13 78.6 115 44.3
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 1.4e-12 77.4 205 31.2
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 1.8e-12 77.0 62 53.2
Sopen10g003370 Solanum pennellii HOM05D016660 ORTHO05D006345 3.1e-12 76.3 107 44.9
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.1e-12 75.9 212 32.5
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 4.1e-12 75.9 158 32.9
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 5.3e-12 75.5 193 33.7
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 1.2e-11 74.3 213 31.5
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 2.6e-11 73.2 219 32.4
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 2.6e-11 73.2 213 31.5
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 4.5e-11 72.4 207 31.4
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 5.9e-11 72.0 171 33.3
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 5.9e-11 72.0 223 32.7
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.7e-10 70.5 211 33.2
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 2.2e-10 70.1 220 30.5
Sopen10g003360 Solanum pennellii HOM05D016660 ORTHO05D006345 3.8e-10 69.3 107 39.3
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.8e-10 69.3 221 33.5
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.1e-09 67.8 212 30.7
PGSC0003DMG400044967 Solanum tuberosum HOM05D016660 ORTHO05D006345 1.4e-09 67.4 112 41.1
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 2.5e-09 66.6 217 31.8
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 7.2e-09 65.1 212 30.2
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 1.2e-08 64.3 221 32.6
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.1e-08 63.5 206 30.6
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 3.6e-08 62.8 214 30.4
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.6e-08 62.8 206 30.6
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 1.0e-07 61.2 209 29.2
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 3.0e-07 59.7 213 29.6
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.0e-07 59.7 212 30.7
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 3.0e-07 59.7 222 28.8
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 3.3e-06 56.2 216 29.2
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 3.3e-06 56.2 226 28.8
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 3.3e-06 56.2 69 46.4
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 3.3e-06 56.2 222 29.7
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 5.7e-06 55.5 221 27.1


User provided reference genes

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