Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012162 Solanum tuberosum HOM05D002584 ORTHO05D002736 0.0e+00 1084.7 580 100.0
Sopen08g030300 Solanum pennellii HOM05D002584 ORTHO05D002736 2.0e-258 895.6 580 83.8
Solyc08g082000.4 Solanum lycopersicum HOM05D002584 ORTHO05D002736 1.9e-256 889.0 580 83.3
CAN.G532.93 Capsicum annuum HOM05D002584 ORTHO05D002736 2.5e-184 649.4 587 64.9
Nitab4.5_0000223g0150 Nicotiana tabacum HOM05D002584 ORTHO05D002736 9.7e-168 594.3 590 61.7
Nitab4.5_0004161g0010 Nicotiana tabacum HOM05D002584 ORTHO05D002736 9.5e-139 498.0 566 57.1
Peaxi162Scf00074g01214 Petunia axillaris HOM05D002584 ORTHO05D002736 2.7e-109 400.2 364 62.4
Peaxi162Scf00102g01740 Petunia axillaris HOM05D002584 ORTHO05D002736 2.1e-69 267.7 624 36.2
Peaxi162Scf00074g00127 Petunia axillaris HOM05D001220 ORTHO05D000110 3.3e-59 233.8 640 36.2
CAN.G792.63 Capsicum annuum HOM05D002584 ORTHO05D002736 3.6e-53 213.8 601 33.3
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 1.5e-35 155.2 595 27.1
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.0e-28 132.5 112 65.2
Nn3g19082 Nelumbo nucifera HOM05D002584 ORTHO05D002736 3.4e-27 127.5 697 26.4
Oeu046819.1 Olea europaea HOM05D002584 ORTHO05D002736 4.9e-26 123.6 286 32.9
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 1.8e-25 121.7 565 27.1
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 3.2e-25 120.9 562 27.6
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 2.3e-23 114.8 292 30.5
MSTRG.1820 Avicennia marina HOM05D002584 ORTHO05D002736 3.9e-23 114.0 725 24.6
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 6.6e-23 113.2 656 25.2
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 4.3e-22 110.5 294 33.0
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 1.2e-21 109.0 147 44.2
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 1.2e-21 109.0 252 33.3
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 1.2e-21 109.0 575 27.0
PSO170G2676 Papaver somniferum HOM05D002584 ORTHO05D002736 1.6e-21 108.6 224 35.3
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 2.1e-21 108.2 619 28.1
PSO017G4509 Papaver somniferum HOM05D002584 ORTHO05D002736 3.6e-21 107.5 240 34.2
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 8.0e-21 106.3 157 40.1
Cc08_g15750 Coffea canephora HOM05D002584 ORTHO05D002736 1.0e-20 105.9 406 27.1
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 1.0e-20 105.9 578 26.1
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 1.4e-20 105.5 164 39.0
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 1.8e-20 105.1 293 32.8
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 1.8e-20 105.1 252 32.9
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 2.3e-20 104.8 318 30.2
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 4.0e-20 104.0 569 25.7
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 4.0e-20 104.0 149 40.9
Rhsim07G0084300 Rhododendron simsii HOM05D002584 ORTHO05D002736 5.2e-20 103.6 148 39.9
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 8.9e-20 102.8 124 46.0
CAN.G792.48 Capsicum annuum HOM05D002584 ORTHO05D002736 1.2e-19 102.4 109 48.6
PSO675G6667 Papaver somniferum HOM05D002584 ORTHO05D002736 1.2e-19 102.4 145 43.4
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 1.5e-19 102.1 564 25.9
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 2.6e-19 101.3 147 40.1
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 3.4e-19 100.9 227 32.2
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 4.4e-19 100.5 218 32.6
PSO339G0177 Papaver somniferum HOM05D002584 ORTHO05D002736 4.4e-19 100.5 272 32.7
CAN.G1505.1 Capsicum annuum HOM05D002584 ORTHO05D002736 7.5e-19 99.8 111 49.5
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 7.5e-19 99.8 150 39.3
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 9.8e-19 99.4 146 39.0
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 1.3e-18 99.0 178 37.6
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 1.3e-18 99.0 197 36.5
HanXRQChr09g0253081 Helianthus annuus HOM05D002584 ORTHO05D002736 1.3e-18 99.0 173 39.3
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 1.7e-18 98.6 316 28.5
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 1.7e-18 98.6 157 39.5
PSO063G5339 Papaver somniferum HOM05D002584 ORTHO05D002736 2.9e-18 97.8 273 31.5
PSO063G1767 Papaver somniferum HOM05D002584 ORTHO05D002736 3.7e-18 97.4 146 39.7
PSO675G1901 Papaver somniferum HOM05D002584 ORTHO05D002736 3.7e-18 97.4 294 30.6
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 6.4e-18 96.7 141 39.7
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 8.3e-18 96.3 164 35.4
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.4e-17 95.5 263 31.6
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 1.4e-17 95.5 619 24.1
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 1.9e-17 95.1 128 43.0
PSO832G1019 Papaver somniferum HOM05D002584 ORTHO05D002736 1.9e-17 95.1 158 39.9
CAN.G792.54 Capsicum annuum HOM05D002584 ORTHO05D002736 2.4e-17 94.7 111 45.0
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 2.4e-17 94.7 154 37.7
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 3.2e-17 94.4 288 28.5
CAN.G792.56 Capsicum annuum HOM05D002584 ORTHO05D002736 4.1e-17 94.0 109 45.0
HanXRQChr09g0253091 Helianthus annuus HOM05D002584 ORTHO05D002736 4.1e-17 94.0 141 40.4
Potri.014G039200 Populus trichocarpa HOM05D002584 ORTHO05D002736 5.4e-17 93.6 625 24.8
Actinidia22714 Actinidia chinensis HOM05D002584 ORTHO05D002736 9.2e-17 92.8 134 38.8
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 1.2e-16 92.4 141 38.3
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.2e-16 92.4 288 28.1
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.2e-16 92.4 288 28.1
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 1.6e-16 92.0 249 30.1
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 1.6e-16 92.0 146 39.0
HanXRQChr09g0253061 Helianthus annuus HOM05D002584 ORTHO05D002736 2.7e-16 91.3 174 34.5
PSO591G0137 Papaver somniferum HOM05D002584 ORTHO05D002736 3.5e-16 90.9 158 38.6
CAN.G792.51 Capsicum annuum HOM05D002584 ORTHO05D002736 4.6e-16 90.5 171 36.8
PSO675G6647 Papaver somniferum HOM05D002584 ORTHO05D002736 4.6e-16 90.5 152 39.5
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 4.6e-16 90.5 154 35.1
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 6.0e-16 90.1 618 26.1
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 6.0e-16 90.1 387 24.8
Actinidia08626 Actinidia chinensis HOM05D002584 ORTHO05D002736 7.8e-16 89.7 164 37.2
DCAR_005024 Daucus carota HOM05D002584 ORTHO05D002736 7.8e-16 89.7 232 30.6
PSO017G6345 Papaver somniferum HOM05D002584 ORTHO05D002736 7.8e-16 89.7 117 44.4
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 1.0e-15 89.4 241 30.7
Lalb_Chr08g0240601 Lupinus albus HOM05D002584 ORTHO05D002736 1.0e-15 89.4 109 45.0
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 1.0e-15 89.4 141 39.0
PSO764G0213 Papaver somniferum HOM05D002584 ORTHO05D002736 1.0e-15 89.4 146 41.8
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 1.0e-15 89.4 288 28.1
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 1.3e-15 89.0 162 36.4
PSO017G1735 Papaver somniferum HOM05D002584 ORTHO05D002736 2.3e-15 88.2 156 35.3
PSO210G0413 Papaver somniferum HOM05D002584 ORTHO05D002736 2.3e-15 88.2 142 37.3
AUR62019335 Chenopodium quinoa HOM05D002584 ORTHO05D002736 3.0e-15 87.8 161 34.8
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 3.9e-15 87.4 267 28.8
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 3.9e-15 87.4 276 27.5
PSO832G4482 Papaver somniferum HOM05D002584 ORTHO05D002736 5.0e-15 87.0 173 39.3
PSO591G0115 Papaver somniferum HOM05D002584 ORTHO05D002736 8.6e-15 86.3 333 27.0
BcaC01g06231 Brassica carinata HOM05D002584 ORTHO05D002736 1.1e-14 85.9 109 39.4
C03p17860 Brassica napus HOM05D002584 ORTHO05D002736 1.1e-14 85.9 109 39.4
BolC3t14193H Brassica oleracea HOM05D002584 ORTHO05D002736 1.1e-14 85.9 109 39.4
Thhalv10013960m.g Eutrema salsugineum HOM05D002584 ORTHO05D002736 1.1e-14 85.9 107 41.1
Lsat_1_v5_gn_9_57421 Lactuca sativa HOM05D002584 ORTHO05D002736 1.1e-14 85.9 148 35.1
PSO478G0802 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-14 85.9 188 33.5
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.5e-14 85.5 288 27.8
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 1.9e-14 85.1 228 30.7
EL10Ac4g09958 Beta vulgaris HOM05D002584 ORTHO05D002736 2.5e-14 84.7 612 24.2
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 2.5e-14 84.7 604 24.2
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 2.5e-14 84.7 109 39.4
A03p15280 Brassica napus HOM05D002584 ORTHO05D002736 3.3e-14 84.3 109 39.4
BraA03t10821Z Brassica rapa HOM05D002584 ORTHO05D002736 3.3e-14 84.3 109 39.4
PSO732G0573 Papaver somniferum HOM05D002584 ORTHO05D002736 3.3e-14 84.3 153 37.9
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 3.3e-14 84.3 618 24.8
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 4.3e-14 84.0 637 26.1
Os01g0221300 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 4.3e-14 84.0 144 33.3
PSO732G0710 Papaver somniferum HOM05D002584 ORTHO05D002736 4.3e-14 84.0 143 42.7
PSO832G3317 Papaver somniferum HOM05D002584 ORTHO05D002736 4.3e-14 84.0 213 31.0
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 5.6e-14 83.6 561 23.5
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 9.5e-14 82.8 116 37.9
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 9.5e-14 82.8 523 23.3
PSO675G0694 Papaver somniferum HOM05D002584 ORTHO05D002736 9.5e-14 82.8 148 40.5
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 1.2e-13 82.4 145 35.9
Migut.E01233 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.6e-13 82.0 599 24.2
ATR1093G048 Amborella trichopoda HOM05D002584 ORTHO05D002736 2.1e-13 81.6 149 34.2
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.8e-13 81.3 302 26.8
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 2.8e-13 81.3 302 26.8
Zm00001eb119710 Zea mays HOM05D002584 ORTHO05D002736 2.8e-13 81.3 139 36.0
Migut.A00683 Erythranthe guttata HOM05D002584 ORTHO05D002736 4.7e-13 80.5 145 35.2
PSO675G1890 Papaver somniferum HOM05D002584 ORTHO05D002736 4.7e-13 80.5 170 33.5
AL8G27880 Arabidopsis lyrata HOM05D002584 ORTHO05D002736 6.2e-13 80.1 224 28.1
PSO017G5210 Papaver somniferum HOM05D002584 ORTHO05D002736 6.2e-13 80.1 179 35.2
PSO764G0332 Papaver somniferum HOM05D002584 ORTHO05D002736 6.2e-13 80.1 146 39.7
PGSC0003DMG402019602 Solanum tuberosum HOM05D002584 ORTHO05D002736 6.2e-13 80.1 54 72.2
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 8.1e-13 79.7 528 24.4
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 8.1e-13 79.7 560 23.8
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 1.1e-12 79.3 176 30.7
Migut.E01018 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.4e-12 79.0 141 35.5
AT5G53220 Arabidopsis thaliana HOM05D002584 ORTHO05D002736 1.8e-12 78.6 167 30.5
Atru.chr9.2048 Acer truncatum HOM05D002584 ORTHO05D002736 3.1e-12 77.8 292 27.1
Migut.J00941 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.1e-12 77.8 144 33.3
PSO170G4022 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-12 77.8 179 35.2
PSO210G0379 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-12 77.8 179 35.2
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 3.1e-12 77.8 626 22.8
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 4.0e-12 77.4 549 23.5
Migut.F00244 Erythranthe guttata HOM05D002584 ORTHO05D002736 4.0e-12 77.4 116 36.2
Hund11407 Selenicereus undatus HOM05D002584 ORTHO05D002736 4.0e-12 77.4 271 28.0
AUR62006155 Chenopodium quinoa HOM05D002584 ORTHO05D002736 5.2e-12 77.0 162 33.3
Aqoxy7G01617 Aquilegia oxysepala HOM05D002584 ORTHO05D002736 6.8e-12 76.6 296 28.7
Migut.A00681 Erythranthe guttata HOM05D002584 ORTHO05D002736 6.8e-12 76.6 106 39.6
Migut.O00408 Erythranthe guttata HOM05D002584 ORTHO05D002736 8.9e-12 76.3 136 35.3
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 8.9e-12 76.3 553 24.6
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 8.9e-12 76.3 543 24.7
PSO732G0732 Papaver somniferum HOM05D002584 ORTHO05D002736 8.9e-12 76.3 184 33.7
CAN.G792.61 Capsicum annuum HOM05D002584 ORTHO05D002736 1.2e-11 75.9 231 28.1
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 1.2e-11 75.9 563 22.6
ECA232G0187 Erigeron canadensis HOM05D002584 ORTHO05D002736 1.5e-11 75.5 120 36.7
PSO063G5830 Papaver somniferum HOM05D002584 ORTHO05D002736 2.0e-11 75.1 112 41.1
AUR62041778 Chenopodium quinoa HOM05D002584 ORTHO05D002736 2.6e-11 74.7 277 27.8
PSO675G5115 Papaver somniferum HOM05D002584 ORTHO05D002736 3.4e-11 74.3 299 27.8
Medtr1g028620 Medicago truncatula HOM05D002584 ORTHO05D002736 4.4e-11 73.9 122 36.1
PSO732G0349 Papaver somniferum HOM05D002584 ORTHO05D002736 4.4e-11 73.9 170 33.5
SGA_v2.0_scaffold192G40581 Striga asiatica HOM05D002584 ORTHO05D002736 1.7e-10 72.0 176 29.5
Eucgr.E00841 Eucalyptus grandis HOM05D002584 ORTHO05D002736 2.2e-10 71.6 112 40.2
arahy.Tifrunner.gnm1.ann1.84BZB4 Arachis hypogaea HOM05D002584 ORTHO05D002736 3.7e-10 70.9 110 36.4
QL02p031474 Quercus lobata HOM05D002584 ORTHO05D002736 3.7e-10 70.9 607 23.9
HanXRQChr17g0535091 Helianthus annuus HOM05D002584 ORTHO05D002736 4.9e-10 70.5 294 24.1
Medtr1g028880 Medicago truncatula HOM05D002584 ORTHO05D002736 4.9e-10 70.5 122 36.9
PGSC0003DMG400001678 Solanum tuberosum HOM05D000032 ORTHO05D002736 8.3e-10 69.7 86 54.7
PSO421G0489 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-09 69.3 117 33.3
vmacro13916 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 1.1e-09 69.3 202 27.7
PSO782G5749 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-09 68.9 112 38.4
SGA_v2.0_scaffold144G35846 Striga asiatica HOM05D035903 ORTHO05D002736 1.9e-09 68.6 577 24.8
Ciclev10019635m.g Citrus clementina HOM05D002584 ORTHO05D002736 5.4e-09 67.0 587 22.5
ECA246G0735 Erigeron canadensis HOM05D002584 ORTHO05D002736 5.4e-09 67.0 114 36.8
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 5.4e-09 67.0 577 24.8
Sed0013734 Sechium edule HOM05D002584 ORTHO05D002736 7.1e-09 66.6 140 29.3
ECA246G4061 Erigeron canadensis HOM05D002584 ORTHO05D002736 2.1e-08 65.1 137 30.7
PSO675G5053 Papaver somniferum HOM05D002584 ORTHO05D002736 2.1e-08 65.1 202 28.7
Aa31LG3G2620 Aethionema arabicum HOM05D002584 ORTHO05D002736 3.5e-08 64.3 495 22.6
TPR.G33314 Trifolium pratense HOM05D002584 ORTHO05D002736 3.5e-08 64.3 164 29.9
CsaV3_4G006400 Cucumis sativus L. HOM05D002584 ORTHO05D002736 1.0e-07 62.8 563 22.9
Sabra01G0070500 Salix brachista HOM05D002584 ORTHO05D002736 2.3e-07 61.6 645 24.7
Medtr1g028850 Medicago truncatula HOM05D002584 ORTHO05D002736 3.0e-07 61.2 109 35.8
Ah.07g206030 Amaranthus hybridus HOM05D002584 ORTHO05D002736 1.9e-06 58.5 476 22.3
Sc01g0004580 Simmondsia chinensis HOM05D002584 ORTHO05D002736 3.3e-06 57.8 117 29.1
PSO732G0203 Papaver somniferum HOM05D002584 ORTHO05D002736 4.3e-06 57.4 202 29.7
FAN03G2222 Fragaria x ananassa HOM05D002584 ORTHO05D002736 7.3e-06 56.6 287 26.1


User provided reference genes

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