Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 8.4e-79 297.0 152 100.0
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 5.5e-62 241.1 154 85.7
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 2.9e-31 139.0 150 58.7
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 5.0e-31 138.3 147 62.6
PGSC0003DMG400012145 Solanum tuberosum HOM05D011491 ORTHO05D009078 1.5e-30 136.7 151 59.6
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 3.2e-30 135.6 150 57.3
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.2e-30 135.6 168 57.1
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 8.0e-29 131.0 147 58.5
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 7.5e-27 124.4 164 54.3
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 2.8e-26 122.5 150 56.0
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 7.0e-25 117.9 105 66.7
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.2e-24 117.1 105 68.6
Nitab4.5_0002782g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 7.7e-24 114.4 118 61.9
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.8e-20 103.2 102 63.7
Nitab4.5_0009000g0010 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.0e-15 87.4 102 55.9
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.9e-10 69.3 122 42.6
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 4.9e-10 68.6 124 41.9
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 1.4e-09 67.0 121 41.3
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 5.4e-09 65.1 125 38.4
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 7.0e-09 64.7 129 40.3
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 9.2e-09 64.3 65 56.9
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 9.2e-09 64.3 65 56.9
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 1.2e-08 63.9 127 37.0
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.6e-08 63.5 119 42.0
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 3.5e-08 62.4 130 40.8
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 3.5e-08 62.4 97 47.4
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 3.5e-08 62.4 125 36.8
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 4.6e-08 62.0 167 34.1
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.3e-07 60.5 139 36.7
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.7e-07 60.1 132 35.6
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 1.7e-07 60.1 136 36.8
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 2.3e-07 59.7 120 37.5
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.3e-07 59.7 129 37.2
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 3.0e-07 59.3 109 41.3
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 3.9e-07 58.9 63 52.4
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 5.0e-07 58.5 99 45.5
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 6.6e-07 58.2 122 38.5
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 6.6e-07 58.2 126 42.1
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 8.6e-07 57.8 124 39.5
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 1.1e-06 57.4 129 38.8
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.1e-06 57.4 111 41.4
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.5e-06 57.0 126 38.1
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.5e-06 57.0 126 38.1
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.5e-06 57.0 126 38.1
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 2.5e-06 56.2 124 36.3
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 4.3e-06 55.5 134 38.8
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.3e-06 55.5 142 34.5
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 4.3e-06 55.5 122 35.2
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 4.3e-06 55.5 113 36.3
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 5.6e-06 55.1 122 39.3
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 7.3e-06 54.7 112 41.1
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.3e-06 54.7 127 33.9
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 9.5e-06 54.3 65 47.7
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 9.5e-06 54.3 64 51.6


User provided reference genes

Program Settings