Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 4.6e-100 367.9 180 100.0
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 1.8e-75 286.2 145 94.5
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 5.1e-75 284.6 145 94.5
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 5.7e-74 281.2 145 92.4
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.1e-72 276.9 145 91.0
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 3.1e-72 275.4 145 90.3
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 5.5e-69 264.6 145 87.6
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.2e-65 252.7 145 82.8
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 1.1e-58 230.3 145 75.2
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 3.3e-58 228.8 126 86.5
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 5.3e-56 221.5 145 71.7
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 6.9e-56 221.1 157 68.2
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 9.1e-56 220.7 145 71.0
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 1.2e-55 220.3 151 69.5
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 1.2e-55 220.3 151 70.2
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 1.2e-55 220.3 146 71.9
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 2.6e-55 219.2 145 71.0
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 3.4e-55 218.8 149 69.1
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 5.9e-55 218.0 144 69.4
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 7.7e-55 217.6 145 71.0
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 7.7e-55 217.6 145 71.0
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 1.3e-54 216.9 146 67.8
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.9e-54 215.7 145 69.7
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 2.9e-54 215.7 145 69.0
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 1.4e-53 213.4 145 69.0
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 2.5e-53 212.6 145 68.3
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 4.2e-53 211.8 145 69.0
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 7.2e-53 211.1 145 66.9
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 7.2e-53 211.1 145 66.2
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 9.4e-53 210.7 145 68.3
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 9.4e-53 210.7 146 67.8
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 9.4e-53 210.7 145 67.6
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.6e-52 209.9 145 69.0
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 2.1e-52 209.5 148 64.9
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 2.7e-52 209.1 145 69.0
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 4.7e-52 208.4 145 67.6
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 6.1e-52 208.0 145 67.6
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 6.1e-52 208.0 145 67.6
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 6.1e-52 208.0 145 69.0
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 1.8e-51 206.5 145 68.3
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 2.3e-51 206.1 145 68.3
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 2.3e-51 206.1 145 68.3
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 5.2e-51 204.9 139 69.1
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 5.2e-51 204.9 145 65.5
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 8.8e-51 204.1 154 61.7
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 1.1e-50 203.8 145 65.5
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 1.5e-50 203.4 148 65.5
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 2.6e-50 202.6 145 65.5
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.6e-50 202.6 146 63.7
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.6e-50 202.6 146 63.7
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 3.3e-50 202.2 145 66.9
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 4.4e-50 201.8 145 69.7
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 9.7e-50 200.7 154 60.4
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 1.3e-49 200.3 145 65.5
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 2.8e-49 199.1 148 62.2
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 2.8e-49 199.1 148 62.2
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 3.7e-49 198.7 153 62.1
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 8.2e-49 197.6 145 65.5
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.4e-48 196.8 146 65.8
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 1.8e-48 196.4 145 64.1
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 7.0e-48 194.5 145 63.4
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 1.6e-47 193.4 149 60.4
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 1.6e-47 193.4 145 61.4
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.6e-47 193.4 148 62.2
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 2.0e-47 193.0 145 66.9
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.6e-47 192.6 147 62.6
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 3.5e-47 192.2 145 62.1
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 4.5e-47 191.8 148 60.8
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 5.9e-47 191.4 145 62.1
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 7.7e-47 191.0 145 65.5
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 1.0e-46 190.7 145 62.8
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 2.9e-46 189.1 145 62.8
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 3.8e-46 188.7 145 63.4
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 5.0e-46 188.3 145 61.4
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 8.5e-46 187.6 145 60.0
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.1e-45 187.2 145 61.4
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 3.2e-45 185.7 145 61.4
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 5.5e-45 184.9 145 61.4
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 2.7e-44 182.6 148 61.5
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 3.6e-44 182.2 145 58.6
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 3.6e-44 182.2 144 57.6
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 4.7e-44 181.8 145 60.0
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 6.1e-44 181.4 145 59.3
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 8.0e-44 181.0 148 60.8
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 8.0e-44 181.0 146 60.3
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 1.4e-43 180.3 145 58.6
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 3.0e-43 179.1 146 59.6
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 3.0e-43 179.1 156 54.5
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 4.8e-41 171.8 145 60.0
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 1.8e-40 169.9 146 58.9
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 3.1e-40 169.1 145 57.9
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 7.0e-40 167.9 146 57.5
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 1.2e-39 167.2 145 60.0
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 1.2e-39 167.2 140 55.0
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 1.0e-38 164.1 145 55.9
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 8.5e-38 161.0 145 57.2
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 8.5e-38 161.0 145 57.2
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 1.1e-37 160.6 145 57.9
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 1.1e-37 160.6 145 57.9
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 1.1e-37 160.6 145 57.9
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 1.1e-37 160.6 145 57.9
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 2.5e-37 159.5 145 57.2
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 7.2e-37 157.9 147 55.8
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 3.6e-36 155.6 145 54.5
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 6.1e-36 154.8 145 55.2
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 5.4e-32 141.7 134 47.8
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 9.1e-32 141.0 98 66.3
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.0e-31 139.8 138 47.8
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 9.5e-29 131.0 81 80.2
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 1.2e-26 124.0 140 43.6
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 3.4e-26 122.5 75 72.0
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.7e-25 120.2 138 43.5
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 7.8e-23 111.3 150 44.0
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 1.7e-22 110.2 67 76.1
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.7e-14 83.6 80 52.5
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 2.6e-10 69.7 141 31.2
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 1.4e-08 63.9 156 28.8
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 3.2e-08 62.8 60 43.3


User provided reference genes

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