Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 5.4e-87 324.3 166 100.0
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 4.7e-83 311.2 166 95.8
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 1.8e-82 309.3 166 95.2
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 1.4e-71 273.1 166 85.5
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.4e-71 273.1 170 83.5
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.7e-64 249.6 168 78.6
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.3e-53 212.6 112 91.1
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.1e-52 210.3 159 70.4
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 3.3e-52 208.8 159 69.2
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.4e-50 202.6 157 65.6
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 3.4e-49 198.7 159 66.0
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 4.4e-49 198.4 153 66.7
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 5.8e-49 198.0 156 64.1
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.3e-48 196.8 156 66.0
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 4.9e-48 194.9 148 65.5
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 6.4e-48 194.5 141 66.0
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.1e-47 193.7 163 60.7
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 1.9e-47 193.0 156 60.3
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.4e-47 192.6 154 63.0
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 5.4e-47 191.4 141 63.8
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 5.4e-47 191.4 156 66.7
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.2e-46 190.3 156 65.4
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.2e-46 190.3 166 59.6
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.6e-46 189.9 157 64.3
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.7e-46 189.1 144 64.6
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 3.5e-46 188.7 160 58.1
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.0e-46 188.0 161 58.4
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 1.0e-45 187.2 142 64.8
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 1.3e-45 186.8 160 58.1
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.3e-45 186.0 144 61.8
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 3.0e-45 185.7 149 63.1
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 3.9e-45 185.3 159 60.4
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 5.1e-45 184.9 152 61.2
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 5.1e-45 184.9 141 63.8
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 6.6e-45 184.5 145 62.1
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 8.7e-45 184.1 154 59.7
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 8.7e-45 184.1 144 62.5
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 8.7e-45 184.1 141 61.0
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.5e-44 183.3 141 64.5
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 1.9e-44 183.0 165 57.6
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 2.5e-44 182.6 141 63.1
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 2.5e-44 182.6 157 60.5
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 9.6e-44 180.6 159 59.7
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 1.3e-43 180.3 160 56.2
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.3e-43 180.3 142 62.0
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.3e-43 180.3 160 56.9
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.3e-43 180.3 161 57.8
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.1e-43 179.5 145 60.7
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.1e-43 179.5 145 59.3
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 2.1e-43 179.5 144 60.4
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 3.6e-43 178.7 158 59.5
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 4.8e-43 178.3 141 61.0
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 6.2e-43 177.9 162 54.9
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 6.2e-43 177.9 143 62.2
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 6.2e-43 177.9 149 59.7
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 6.2e-43 177.9 144 56.2
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 1.1e-42 177.2 146 58.2
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.1e-42 177.2 155 58.1
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 1.4e-42 176.8 142 60.6
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 1.4e-42 176.8 155 57.4
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 1.4e-42 176.8 136 63.2
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 1.4e-42 176.8 160 56.9
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.8e-42 176.4 159 61.6
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.4e-42 176.0 155 60.6
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 3.1e-42 175.6 163 54.0
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 3.1e-42 175.6 144 61.1
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 4.0e-42 175.3 157 54.8
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 4.0e-42 175.3 141 60.3
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 4.0e-42 175.3 165 55.8
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 5.3e-42 174.9 142 60.6
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 6.9e-42 174.5 145 57.9
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 6.9e-42 174.5 145 57.9
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 6.9e-42 174.5 155 58.7
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 9.0e-42 174.1 162 54.9
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 9.0e-42 174.1 141 59.6
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.2e-41 173.7 163 53.4
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 1.5e-41 173.3 156 54.5
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 1.5e-41 173.3 129 69.8
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 2.0e-41 172.9 142 58.5
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 2.0e-41 172.9 158 55.1
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 2.0e-41 172.9 148 58.8
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 2.6e-41 172.6 143 61.5
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 2.6e-41 172.6 156 56.4
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 7.6e-41 171.0 157 55.4
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 7.6e-41 171.0 159 54.7
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 9.9e-41 170.6 155 55.5
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.3e-40 170.2 134 61.2
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.7e-40 169.9 165 53.9
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 2.9e-40 169.1 158 55.7
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 3.8e-40 168.7 163 55.8
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 4.9e-40 168.3 158 55.1
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 8.4e-40 167.5 142 56.3
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 1.9e-39 166.4 158 55.1
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 3.2e-39 165.6 136 60.3
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 9.3e-39 164.1 154 53.9
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.7e-38 162.5 165 50.9
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 4.6e-38 161.8 159 54.7
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 1.0e-37 160.6 158 55.1
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 3.9e-37 158.7 140 53.6
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 5.1e-37 158.3 119 65.5
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.5e-36 156.8 142 52.1
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 6.2e-35 151.4 171 49.1
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.4e-34 150.2 133 57.1
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 4.5e-33 145.2 149 51.0
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 3.8e-32 142.1 136 55.1
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 3.8e-32 142.1 142 53.5
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 8.4e-32 141.0 114 61.4
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 3.2e-31 139.0 115 60.0
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 3.5e-30 135.6 133 57.1
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 1.0e-29 134.0 143 51.0
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.3e-27 127.1 152 46.7
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 3.7e-27 125.6 165 43.0
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 4.0e-26 122.1 138 45.7
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 1.2e-25 120.6 138 44.2
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.5e-25 120.2 134 43.3
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 5.0e-24 115.2 127 42.5
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.9e-23 113.2 76 68.4
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 3.0e-21 105.9 122 47.5
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 8.2e-19 97.8 115 42.6
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 1.4e-18 97.1 91 54.9
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.2e-17 94.0 145 39.3
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 4.5e-17 92.0 72 62.5
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 5.9e-17 91.7 89 50.6
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 2.9e-16 89.4 131 36.6
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.2e-15 85.9 141 36.2
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 3.2e-15 85.9 64 64.1
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 7.9e-14 81.3 78 50.0
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 4.1e-10 68.9 76 46.1
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 9.1e-10 67.8 71 49.3
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 3.4e-09 65.9 41 61.0
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.2e-06 57.4 52 53.8


User provided reference genes

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