Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011897 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.4e-203 711.1 360 100.0
Solyc09g098130.3 Solanum lycopersicum HOM05D000011 ORTHO05D007164 8.7e-175 617.1 381 84.0
Sopen09g036080 Solanum pennellii HOM05D000011 ORTHO05D007164 4.8e-173 611.3 382 83.8
PGSC0003DMG400016601 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.2e-128 463.8 384 65.9
PGSC0003DMG400006573 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.8e-127 459.9 373 66.5
Sopen09g036040 Solanum pennellii HOM05D000011 ORTHO05D007164 8.8e-127 457.6 397 62.7
PGSC0003DMG401016602 Solanum tuberosum HOM05D000011 ORTHO05D007164 9.8e-126 454.1 386 64.2
PGSC0003DMG402016602 Solanum tuberosum HOM05D000011 ORTHO05D007164 9.8e-126 454.1 386 64.2
Solyc09g098100.4 Solanum lycopersicum HOM05D000011 ORTHO05D007164 2.2e-125 453.0 404 61.4
PGSC0003DMG400006570 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.2e-125 453.0 382 66.0
PGSC0003DMG400006571 Solanum tuberosum HOM05D000011 ORTHO05D007164 3.1e-124 449.1 380 63.9
CAN.G681.45 Capsicum annuum HOM05D000011 ORTHO05D007164 3.2e-121 439.1 383 63.7
PGSC0003DMG400020851 Solanum tuberosum HOM05D000011 ORTHO05D007164 9.1e-116 421.0 381 61.9
CAN.G681.34 Capsicum annuum HOM05D000011 ORTHO05D007164 1.8e-111 406.8 380 62.6
CAN.G681.35 Capsicum annuum HOM05D000011 ORTHO05D007164 4.9e-109 398.7 351 61.5
Nitab4.5_0000309g0150 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.3e-101 374.0 390 56.2
Nitab4.5_0000309g0100 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.0e-98 364.4 381 54.6
PGSC0003DMG400038440 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.1e-97 360.9 313 64.9
Sopen09g026370 Solanum pennellii HOM05D000011 ORTHO05D007164 3.4e-94 349.4 385 54.0
PGSC0003DMG402006288 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.2e-93 346.7 432 50.2
CAN.G375.80 Capsicum annuum HOM05D000011 ORTHO05D007164 3.7e-93 345.9 394 52.8
Nitab4.5_0008390g0030 Nicotiana tabacum HOM05D000011 ORTHO05D007164 3.7e-93 345.9 381 53.8
Nitab4.5_0002781g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 4.9e-93 345.5 382 53.9
CAN.G681.49 Capsicum annuum HOM05D000011 ORTHO05D007164 1.1e-92 344.4 380 52.4
PGSC0003DMG400006577 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.3e-89 332.4 327 58.4
CAN.G681.36 Capsicum annuum HOM05D000011 ORTHO05D007164 7.3e-89 331.6 381 51.4
CAN.G681.47 Capsicum annuum HOM05D000011 ORTHO05D007164 9.5e-89 331.3 383 52.0
Nitab4.5_0002781g0050 Nicotiana tabacum HOM05D000011 ORTHO05D007164 8.1e-88 328.2 384 52.1
Nitab4.5_0001689g0080 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.6e-83 313.9 465 44.7
PGSC0003DMG400020872 Solanum tuberosum HOM05D000011 ORTHO05D007164 4.6e-83 312.4 220 72.7
Nitab4.5_0001689g0060 Nicotiana tabacum HOM05D000011 ORTHO05D007164 3.9e-82 309.3 386 50.5
Nitab4.5_0000309g0160 Nicotiana tabacum HOM05D000011 ORTHO05D007164 6.6e-82 308.5 386 50.3
Peaxi162Scf00157g01645 Petunia axillaris HOM05D000011 ORTHO05D007164 1.1e-79 301.2 396 49.2
Nitab4.5_0001689g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.4e-79 300.8 383 49.1
CAN.G681.42 Capsicum annuum HOM05D000011 ORTHO05D007164 7.6e-78 295.0 389 49.4
Peaxi162Scf00758g00005 Petunia axillaris HOM05D000011 ORTHO05D007164 2.9e-77 293.1 398 47.2
PGSC0003DMG400031185 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.0e-74 284.6 273 60.1
Peaxi162Scf00758g00012 Petunia axillaris HOM05D000011 ORTHO05D007164 4.8e-72 275.8 383 45.2
Peaxi162Scf00067g00026 Petunia axillaris HOM05D000011 ORTHO05D007164 1.8e-71 273.9 329 51.4
Peaxi162Scf00157g01646 Petunia axillaris HOM05D000011 ORTHO05D007164 4.4e-70 269.2 329 50.8
Nitab4.5_0004585g0050 Nicotiana tabacum HOM05D000011 ORTHO05D007164 9.9e-70 268.1 392 45.2
CAN.G220.8 Capsicum annuum HOM05D000011 ORTHO05D007164 2.4e-68 263.5 384 46.1
Peaxi162Scf00286g00530 Petunia axillaris HOM05D000011 ORTHO05D007164 3.2e-68 263.1 394 45.2
CAN.G1552.6 Capsicum annuum HOM05D000011 ORTHO05D007164 5.4e-68 262.3 381 45.1
Nitab4.5_0008680g0010 Nicotiana tabacum HOM05D000011 ORTHO05D007164 4.6e-67 259.2 371 45.8
CAN.G1310.7 Capsicum annuum HOM05D000011 ORTHO05D115643 3.9e-66 256.1 300 49.3
CAN.G710.24 Capsicum annuum HOM05D000011 ORTHO05D007164 1.1e-63 248.1 380 43.7
PGSC0003DMG400018619 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.1e-63 248.1 395 42.5
CAN.G710.26 Capsicum annuum HOM05D000011 ORTHO05D007164 3.1e-63 246.5 360 45.6
CAN.G461.5 Capsicum annuum HOM05D000011 ORTHO05D007164 4.0e-63 246.1 305 50.2
Peaxi162Scf00654g00009 Petunia axillaris HOM05D000011 ORTHO05D007164 9.0e-63 245.0 299 48.8
CAN.G681.50 Capsicum annuum HOM05D000011 ORTHO05D007164 3.4e-62 243.0 369 44.7
Peaxi162Scf00536g00053 Petunia axillaris HOM05D000011 ORTHO05D007164 3.5e-59 233.0 265 55.1
PGSC0003DMG400011898 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.3e-58 231.1 244 55.3
Nitab4.5_0004585g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 8.7e-58 228.4 362 43.6
Solyc09g064690.1 Solanum lycopersicum HOM05D000011 ORTHO05D007164 1.8e-55 220.7 231 54.5
PGSC0003DMG400006576 Solanum tuberosum HOM05D000011 ORTHO05D007164 1.5e-54 217.6 124 89.5
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 5.5e-52 209.1 359 40.9
PGSC0003DMG400015588 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.1e-48 197.2 305 43.0
PGSC0003DMG400043186 Solanum tuberosum HOM05D000011 ORTHO05D007164 2.1e-48 197.2 220 53.6
Nitab4.5_0005938g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 1.4e-47 194.5 197 57.4
Peaxi162Scf01366g00017 Petunia axillaris HOM05D000011 ORTHO05D007164 9.0e-47 191.8 358 39.7
CAN.G706.27 Capsicum annuum HOM05D000011 ORTHO05D007164 2.2e-45 187.2 200 52.0
CAN.G713.16 Capsicum annuum HOM05D000011 ORTHO05D016876 7.2e-44 182.2 184 53.8
Peaxi162Scf00765g00217 Petunia axillaris HOM05D000011 ORTHO05D007164 2.5e-41 173.7 287 41.5
PGSC0003DMG400041167 Solanum tuberosum HOM05D000011 ORTHO05D007164 3.1e-39 166.8 259 41.7
Sopen12g019040 Solanum pennellii HOM05D000011 ORTHO05D037288 1.0e-37 161.8 232 44.8
Nitab4.5_0001689g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 5.5e-36 156.0 192 46.9
CAN.G681.56 Capsicum annuum HOM05D000011 ORTHO05D007164 2.5e-33 147.1 113 69.9
PGSC0003DMG400011193 Solanum tuberosum HOM05D000011 ORTHO05D007164 9.7e-33 145.2 157 54.1
CAN.G95.16 Capsicum annuum HOM05D000011 ORTHO05D016876 1.1e-28 131.7 130 54.6
CAN.G681.39 Capsicum annuum HOM05D000004 ORTHO05D000002 3.2e-28 130.2 125 60.0
Nitab4.5_0004200g0020 Nicotiana tabacum HOM05D000011 ORTHO05D007164 9.4e-28 128.6 124 61.3
Nitab4.5_0006946g0040 Nicotiana tabacum HOM05D000011 ORTHO05D007164 2.1e-27 127.5 126 61.1
CAN.G616.14 Capsicum annuum HOM05D000011 ORTHO05D016876 6.1e-27 125.9 135 52.6
CAN.G681.38 Capsicum annuum HOM05D000011 ORTHO05D016876 1.0e-26 125.2 191 45.5
Nitab4.5_0004466g0030 Nicotiana tabacum HOM05D000011 ORTHO05D284376 1.0e-26 125.2 143 55.2
CAN.G461.2 Capsicum annuum HOM05D000011 ORTHO05D007164 5.3e-23 112.8 205 38.5
CAN.G48.3 Capsicum annuum HOM05D000011 ORTHO05D007164 5.3e-23 112.8 111 56.8
CAN.G57.21 Capsicum annuum HOM05D000011 ORTHO05D024769 3.5e-22 110.2 223 35.0
CAN.G140.33 Capsicum annuum HOM05D000011 ORTHO05D115489 7.7e-22 109.0 347 30.8
CAN.G681.54 Capsicum annuum HOM05D000011 ORTHO05D007164 1.1e-20 105.1 212 34.4
CAN.G687.14 Capsicum annuum HOM05D000011 ORTHO05D016876 1.0e-18 98.6 240 32.5
Peaxi162Scf00216g00063 Petunia axillaris HOM05D000011 ORTHO05D306622 2.3e-18 97.4 171 39.2
Nitab4.5_0005938g0070 Nicotiana tabacum HOM05D000011 ORTHO05D016876 9.7e-17 92.0 102 51.0
Peaxi162Scf00654g00011 Petunia axillaris HOM05D000011 ORTHO05D305981 1.3e-16 91.7 65 69.2
Peaxi162Scf49532g00002 Petunia axillaris HOM05D000011 ORTHO05D037288 2.2e-16 90.9 82 65.9
Peaxi162Scf00765g00212 Petunia axillaris HOM05D000011 ORTHO05D007164 4.8e-16 89.7 123 47.2
Nitab4.5_0000032g0080 Nicotiana tabacum HOM05D000011 ORTHO05D000018 6.3e-16 89.4 119 46.2
Peaxi162Scf01366g00019 Petunia axillaris HOM05D000011 ORTHO05D007164 4.1e-15 86.7 66 72.7
CAN.G58.49 Capsicum annuum HOM05D000011 ORTHO05D007164 1.6e-14 84.7 87 50.6
CAN.G681.46 Capsicum annuum HOM05D000011 ORTHO05D007164 1.6e-14 84.7 97 50.5
CAN.G1042.1 Capsicum annuum HOM05D000011 ORTHO05D115861 2.2e-13 80.9 110 45.5
Nitab4.5_0001735g0160 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.9e-12 77.8 365 23.0
Peaxi162Scf01366g00007 Petunia axillaris HOM05D000011 ORTHO05D016876 4.2e-12 76.6 99 45.5
CAN.G1590.3 Capsicum annuum HOM05D000011 ORTHO05D001721 5.5e-12 76.3 367 23.7
Nitab4.5_0004406g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.5e-12 76.3 365 22.5
CAN.G1744.6 Capsicum annuum HOM05D000011 ORTHO05D001721 2.7e-11 73.9 218 25.7
CAN.G3968.1 Capsicum annuum HOM05D000011 ORTHO05D001721 1.4e-10 71.6 370 22.7
CAN.G713.17 Capsicum annuum HOM05D000011 ORTHO05D024769 1.8e-10 71.2 59 64.4
Nitab4.5_0009187g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.2e-10 69.7 377 23.1
CAN.G1447.12 Capsicum annuum HOM05D000011 ORTHO05D001721 1.2e-09 68.6 239 25.1
Nitab4.5_0000777g0120 Nicotiana tabacum HOM05D000011 ORTHO05D001721 5.7e-09 66.2 384 23.7
CAN.G294.23 Capsicum annuum HOM05D000005 ORTHO05D007164 7.5e-09 65.9 83 45.8
Solyc05g043420.2 Solanum lycopersicum HOM05D000011 ORTHO05D001721 1.7e-08 64.7 294 24.8
CAN.G741.39 Capsicum annuum HOM05D000011 ORTHO05D001721 2.2e-08 64.3 222 25.2
CAN.G1268.5 Capsicum annuum HOM05D000011 ORTHO05D001721 2.8e-08 63.9 201 27.4
Nitab4.5_0003836g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.8e-08 63.9 384 22.1
Nitab4.5_0004200g0040 Nicotiana tabacum HOM05D000011 ORTHO05D016876 2.8e-08 63.9 58 56.9
Nitab4.5_0007572g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 2.8e-08 63.9 247 24.3
Nitab4.5_0000777g0180 Nicotiana tabacum HOM05D000011 ORTHO05D001721 6.3e-08 62.8 307 24.8
CAN.G1447.7 Capsicum annuum HOM05D000011 ORTHO05D001721 8.3e-08 62.4 198 27.8
PGSC0003DMG400002217 Solanum tuberosum HOM05D000011 ORTHO05D001721 8.3e-08 62.4 371 21.3
CAN.G186.40 Capsicum annuum HOM05D000011 ORTHO05D001721 1.1e-07 62.0 346 23.1
Nitab4.5_0007572g0020 Nicotiana tabacum HOM05D000011 ORTHO05D001721 1.8e-07 61.2 198 25.8
Nitab4.5_0002983g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.1e-07 60.5 372 20.2
Nitab4.5_0005135g0040 Nicotiana tabacum HOM05D000011 ORTHO05D001721 4.1e-07 60.1 339 20.6
CAN.G1926.12 Capsicum annuum HOM05D000011 ORTHO05D001721 5.4e-07 59.7 201 23.9
Nitab4.5_0003671g0050 Nicotiana tabacum HOM05D000011 ORTHO05D001721 7.0e-07 59.3 213 20.7
Nitab4.5_0010653g0010 Nicotiana tabacum HOM05D000011 ORTHO05D001721 9.1e-07 58.9 372 21.0
Solyc12g038910.1 Solanum lycopersicum HOM05D000011 ORTHO05D037288 1.2e-06 58.5 53 62.3
Peaxi162Scf00034g01612 Petunia axillaris HOM05D000011 ORTHO05D001721 1.6e-06 58.2 213 24.4
Nitab4.5_0000488g0160 Nicotiana tabacum HOM05D000011 ORTHO05D001721 3.5e-06 57.0 213 20.2
CAN.G1696.2 Capsicum annuum HOM05D000011 ORTHO05D001721 5.9e-06 56.2 221 24.9


User provided reference genes

Program Settings