Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 6.9e-259 896.7 437 100.0
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 8.5e-249 863.2 453 93.2
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 1.6e-231 805.8 452 87.6
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 3.7e-220 768.1 453 84.3
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 8.5e-217 756.9 455 82.4
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 8.0e-215 750.4 447 82.6
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 1.6e-207 726.1 360 96.9
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.7e-169 599.7 404 70.5
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 1.4e-166 590.1 422 66.6
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 9.9e-165 583.9 432 65.0
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 2.9e-164 582.4 411 67.4
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 8.4e-164 580.9 408 67.6
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 1.0e-161 573.9 431 64.5
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 6.6e-161 571.2 434 64.1
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 1.1e-160 570.5 418 65.6
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 2.1e-159 566.2 429 64.1
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 3.6e-159 565.5 407 65.1
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 3.6e-159 565.5 407 67.1
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 1.1e-158 563.9 401 67.8
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 1.8e-158 563.1 406 66.3
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 4.0e-158 562.0 415 66.0
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 4.0e-158 562.0 427 64.9
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 2.0e-157 559.7 408 66.2
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.7e-156 556.6 410 64.6
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 3.8e-156 555.4 408 65.9
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 3.8e-156 555.4 431 64.5
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 5.4e-155 551.6 405 64.7
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.2e-154 550.4 406 66.7
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 2.1e-154 549.7 411 62.3
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 2.1e-154 549.7 409 63.1
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 4.6e-154 548.5 411 64.7
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 7.9e-154 547.7 406 67.2
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 1.0e-153 547.4 428 63.8
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 1.3e-153 547.0 431 63.6
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 1.8e-153 546.6 432 59.7
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 2.3e-153 546.2 366 72.7
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 3.0e-153 545.8 419 64.7
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 3.9e-153 545.4 431 63.8
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 3.9e-153 545.4 429 62.0
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 1.1e-152 543.9 411 65.2
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.5e-152 543.5 428 61.9
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 3.3e-152 542.3 409 62.6
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 3.3e-152 542.3 409 62.6
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 7.4e-152 541.2 411 63.7
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 2.1e-151 539.7 428 61.7
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 2.1e-151 539.7 412 62.6
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 5.3e-150 535.0 409 63.6
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 6.9e-150 534.6 412 60.9
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 2.6e-149 532.7 407 62.9
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 1.3e-148 530.4 411 64.0
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.9e-148 529.3 415 62.2
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 4.9e-148 528.5 417 63.1
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 4.9e-148 528.5 407 61.2
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.4e-147 526.9 406 61.8
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 7.1e-147 524.6 409 62.1
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 9.3e-147 524.2 413 61.0
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 1.2e-146 523.9 425 60.7
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 1.6e-146 523.5 416 61.3
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 2.7e-146 522.7 407 62.2
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 4.6e-146 521.9 418 61.5
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 2.3e-145 519.6 415 60.7
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.1e-144 517.3 455 59.1
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 1.5e-144 516.9 410 60.0
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 4.3e-144 515.4 410 61.2
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 5.7e-144 515.0 430 58.1
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 7.4e-144 514.6 417 60.0
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 1.1e-142 510.8 406 59.4
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 1.1e-142 510.8 414 60.1
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 7.6e-141 504.6 422 57.8
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.7e-140 503.4 407 59.5
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 6.5e-140 501.5 414 58.5
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 6.5e-140 501.5 420 58.3
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 1.1e-139 500.7 408 61.0
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 9.3e-139 497.7 410 59.0
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 4.6e-138 495.4 403 59.6
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 2.5e-136 489.6 433 56.1
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 5.9e-133 478.4 410 58.0
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 1.0e-132 477.6 417 56.8
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.7e-132 476.9 415 57.1
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 8.5e-132 474.6 399 59.4
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 9.4e-131 471.1 423 55.3
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 2.3e-129 466.5 386 58.0
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.5e-128 463.8 401 55.6
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 2.0e-128 463.4 401 55.1
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 7.7e-125 451.4 299 70.2
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 8.5e-124 448.0 404 55.9
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 2.5e-123 446.4 405 55.6
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 2.7e-122 443.0 383 54.8
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 1.4e-121 440.7 360 58.9
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.8e-121 440.3 357 60.8
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.3e-121 439.9 426 51.9
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 1.0e-108 397.9 291 66.0
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 2.5e-107 393.3 305 61.3
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 3.2e-107 392.9 369 50.9
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 3.7e-103 379.4 299 61.5
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 7.2e-99 365.2 418 45.7
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 3.6e-90 336.3 401 45.9
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 1.3e-63 248.1 304 41.4
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 3.5e-61 240.0 277 48.4
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 2.1e-45 187.6 402 33.8
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 2.7e-45 187.2 122 70.5
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.4e-41 174.9 511 29.4
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 1.4e-38 164.9 199 43.2
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 3.7e-34 150.2 104 68.3
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 4.3e-27 126.7 499 26.5
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.3e-20 105.1 265 29.1
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 1.8e-17 94.7 92 55.4
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 1.2e-16 92.0 97 50.5
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.4e-14 85.1 57 68.4
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 5.3e-09 66.6 49 63.3


User provided reference genes

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