Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011817 Solanum tuberosum HOM05D001626 ORTHO05D001563 4.9e-94 347.8 178 100.0
Sopen04g026990 Solanum pennellii HOM05D001626 ORTHO05D001563 8.5e-22 107.8 85 68.2
Nitab4.5_0000032g0530 Nicotiana tabacum HOM05D001626 ORTHO05D001563 1.9e-21 106.7 86 66.3
PGSC0003DMG400000774 Solanum tuberosum HOM05D001626 ORTHO05D001563 2.5e-21 106.3 85 67.1
Solyc04g071050.4 Solanum lycopersicum HOM05D001626 ORTHO05D001563 7.2e-21 104.8 85 67.1
Nitab4.5_0003778g0010 Nicotiana tabacum HOM05D001626 ORTHO05D001563 8.8e-19 97.8 86 65.1
Peaxi162Scf00263g00129 Petunia axillaris HOM05D001626 ORTHO05D001563 1.5e-15 87.0 86 58.1
Sopen06g019350 Solanum pennellii HOM05D003253 ORTHO05D002078 5.9e-15 85.1 166 39.2
Sopen10g011890 Solanum pennellii HOM05D049686 ORTHO05D051105 9.4e-13 77.8 137 37.2
Solyc06g054230.4 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.7e-12 76.3 160 36.9
PGSC0003DMG400023100 Solanum tuberosum HOM05D003253 ORTHO05D002078 3.0e-11 72.8 165 33.9
PGSC0003DMG400039774 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.5e-10 70.5 129 39.5
PGSC0003DMG400030174 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.7e-09 67.0 160 34.4
Dinv41100 Davidia involucrata HOM05D001626 ORTHO05D001563 3.7e-09 65.9 91 45.1
Sopen06g019340 Solanum pennellii HOM05D003253 ORTHO05D002078 3.7e-09 65.9 160 33.8
Cc10_g14060 Coffea canephora HOM05D001626 ORTHO05D001563 6.3e-09 65.1 89 44.9
PGSC0003DMG400041970 Solanum tuberosum HOM05D003253 ORTHO05D002078 6.3e-09 65.1 96 50.0
Solyc06g054200.3 Solanum lycopersicum HOM05D003253 ORTHO05D002078 8.2e-09 64.7 37 83.8
Sopen09g024540 Solanum pennellii HOM05D003253 ORTHO05D002078 8.2e-09 64.7 160 34.4
Solyc09g059740.3 Solanum lycopersicum HOM05D003253 ORTHO05D002078 1.1e-08 64.3 167 32.3
PGSC0003DMG400040745 Solanum tuberosum HOM05D001626 ORTHO05D001563 1.1e-08 64.3 56 58.9
Solyc09g061370.1 Solanum lycopersicum HOM05D003253 ORTHO05D002078 2.4e-08 63.2 44 70.5
Oeu009858.1 Olea europaea HOM05D001626 ORTHO05D001563 4.1e-08 62.4 129 33.3
PGSC0003DMG400030176 Solanum tuberosum HOM05D003253 ORTHO05D002078 1.2e-07 60.8 119 40.3
Oeu025466.3 Olea europaea HOM05D001626 ORTHO05D001563 2.6e-07 59.7 88 40.9
Haze_17738 Corylus avellana HOM05D001626 ORTHO05D001563 4.5e-07 58.9 90 41.1
Phvul.004G098400 Phaseolus vulgaris HOM05D001626 ORTHO05D001563 4.5e-07 58.9 100 41.0
VMungo0464G0210 Vigna mungo HOM05D001626 ORTHO05D001563 7.7e-07 58.2 92 42.4
CiPaw.15G017600 Carya illinoinensis HOM05D001626 ORTHO05D001563 1.0e-06 57.8 88 38.6
Manes.18G090100 Manihot esculenta HOM05D001626 ORTHO05D001563 6.5e-06 55.1 85 38.8
QL02p024321 Quercus lobata HOM05D001626 ORTHO05D001563 8.5e-06 54.7 90 38.9


User provided reference genes

Program Settings