Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.4e-160 569.7 319 100.0
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 9.6e-109 397.5 225 81.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.6e-106 389.4 244 77.0
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.6e-103 380.2 226 78.3
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 2.5e-88 329.7 212 72.6
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 9.3e-88 327.8 206 71.8
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 9.3e-88 327.8 205 71.7
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.7e-87 326.2 225 67.6
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 4.6e-87 325.5 226 65.5
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.8e-86 323.6 210 69.5
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 3.9e-86 322.4 211 69.7
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 5.1e-86 322.0 227 64.3
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 1.1e-85 320.9 219 65.3
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 5.7e-85 318.5 222 67.1
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 7.4e-85 318.2 208 69.2
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.6e-84 317.0 222 64.4
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 2.0e-82 310.1 207 67.1
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.6e-82 309.7 205 69.3
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 5.9e-82 308.5 208 68.3
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 1.7e-81 307.0 228 62.7
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 2.2e-81 306.6 221 66.1
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.1e-80 304.3 212 66.5
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 2.5e-80 303.1 233 61.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 1.6e-79 300.4 214 65.0
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 6.7e-78 295.0 222 63.1
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.0e-77 293.5 214 63.1
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 7.4e-77 291.6 202 67.3
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.7e-76 290.4 208 63.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 2.8e-76 289.7 232 61.2
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 8.2e-76 288.1 206 61.2
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.4e-75 286.6 210 64.3
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 3.1e-75 286.2 216 61.1
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.5e-74 283.9 208 61.1
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.0e-73 281.2 211 63.0
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.7e-73 280.4 242 57.0
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.7e-73 280.4 212 57.1
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 3.8e-73 279.3 210 60.0
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 3.8e-73 279.3 208 60.1
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 5.0e-73 278.9 205 63.4
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.1e-72 277.7 201 61.7
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 2.1e-71 273.5 231 58.0
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 2.3e-70 270.0 202 63.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 2.0e-69 266.9 228 57.0
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.8e-68 263.1 170 67.6
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 6.5e-65 251.9 248 51.6
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 7.2e-64 248.4 172 62.8
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 2.3e-62 243.4 220 53.6
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.5e-56 223.4 103 95.1
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.1e-51 208.0 160 58.8
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 1.4e-51 207.6 103 88.3
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 9.1e-51 204.9 121 67.8
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 2.0e-50 203.8 243 41.2
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 4.5e-50 202.6 145 65.5
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 1.7e-49 200.7 206 51.0
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.2e-49 200.3 124 65.3
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 5.0e-49 199.1 201 47.3
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.0e-49 199.1 137 67.9
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 4.2e-48 196.1 122 63.1
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.2e-47 194.5 227 42.7
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.0e-46 191.4 125 69.6
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 3.0e-46 189.9 111 70.3
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.2e-45 188.0 133 63.2
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 4.4e-45 186.0 130 61.5
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 9.2e-43 178.3 111 66.7
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 9.2e-43 178.3 114 65.8
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.1e-40 171.4 107 68.2
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 2.8e-39 166.8 103 66.0
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.3e-38 163.7 216 39.4
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 5.2e-38 162.5 102 68.6
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 2.0e-37 160.6 103 59.2
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.8e-35 154.1 119 66.4
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 5.4e-35 152.5 193 38.9
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 1.5e-32 144.4 160 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.3e-32 143.3 211 35.5
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 7.3e-32 142.1 200 38.0
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 1.6e-31 141.0 86 67.4
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 3.6e-31 139.8 160 55.6
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 1.0e-30 138.3 115 60.0
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.1e-24 118.2 194 35.6
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.5e-24 117.1 184 35.3
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 8.1e-23 112.1 73 58.9
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 1.1e-22 111.7 78 67.9
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 4.0e-22 109.8 198 33.8
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 8.3e-20 102.1 205 33.2
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.4e-19 101.3 101 49.5
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 9.5e-16 88.6 63 63.5
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 4.0e-14 83.2 213 29.6
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 7.8e-10 68.9 46 78.3
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.7e-09 67.8 123 35.8
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 2.3e-09 67.4 54 63.0
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 1.1e-08 65.1 59 57.6
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 2.1e-07 60.8 70 47.1
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 8.1e-07 58.9 46 67.4
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.1e-06 58.5 57 56.1
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.1e-06 58.5 64 50.0


User provided reference genes

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