Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011488 Solanum tuberosum HOM05D000283 ORTHO05D006673 0.0e+00 1075.1 562 100.0
PGSC0003DMG400011471 Solanum tuberosum HOM05D000283 ORTHO05D006673 6.5e-177 624.8 420 79.5
PGSC0003DMG400011487 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.4e-123 447.6 433 61.2
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.4e-115 421.0 606 46.7
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.9e-104 384.0 581 46.0
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.3e-103 381.3 528 48.9
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 3.6e-103 379.8 581 45.8
Solyc04g010155.2 Solanum lycopersicum HOM05D000283 ORTHO05D006673 4.9e-100 369.4 470 49.4
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 1.1e-99 368.2 524 48.1
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 1.1e-99 368.2 525 48.0
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 2.7e-98 363.6 615 42.6
Sopen04g005310 Solanum pennellii HOM05D000283 ORTHO05D006673 6.5e-92 342.4 461 48.2
Sopen04g005270 Solanum pennellii HOM05D000283 ORTHO05D006673 1.0e-76 292.0 603 38.1
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 6.3e-71 272.7 318 53.8
Sopen04g005330 Solanum pennellii HOM05D000283 ORTHO05D006673 5.0e-68 263.1 424 44.1
Sopen04g005290 Solanum pennellii HOM05D000312 ORTHO05D000221 2.3e-65 254.2 183 77.6
PGSC0003DMG400037112 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.1e-64 251.9 141 92.9
PGSC0003DMG400011472 Solanum tuberosum HOM05D000283 ORTHO05D006673 2.6e-61 240.7 325 47.1
Sopen04g005350 Solanum pennellii HOM05D000283 ORTHO05D006673 8.0e-58 229.2 357 46.8
PGSC0003DMG400011484 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.1e-54 218.8 400 44.5
PGSC0003DMG400042471 Solanum tuberosum HOM05D000283 ORTHO05D006673 2.3e-41 174.5 169 58.0
Sopen04g005300 Solanum pennellii HOM05D000283 ORTHO05D006673 1.1e-38 165.6 536 31.3
PGSC0003DMG400039757 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.7e-36 158.3 106 76.4
CAN.G786.35 Capsicum annuum HOM05D000283 ORTHO05D006673 1.2e-29 135.6 106 66.0
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 4.3e-27 127.1 646 26.9
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 1.2e-26 125.6 627 27.3
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 1.1e-22 112.5 630 25.4
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.4e-22 111.3 615 25.5
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 1.7e-20 105.1 547 26.5
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 2.3e-20 104.8 252 36.5
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 4.3e-19 100.5 350 30.0
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.1e-17 95.9 632 26.1
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 1.1e-17 95.9 404 30.9
Sopen04g005280 Solanum pennellii HOM05D000283 ORTHO05D006673 1.8e-17 95.1 88 60.2
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 3.1e-17 94.4 358 30.2
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 6.8e-17 93.2 268 35.1
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 1.2e-16 92.4 358 29.9
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 4.4e-16 90.5 331 31.4
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 1.3e-15 89.0 330 30.9
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 1.7e-15 88.6 304 31.9
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 3.7e-15 87.4 330 30.6
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 1.1e-14 85.9 418 28.2
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 3.2e-14 84.3 170 38.2
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 5.4e-14 83.6 133 42.1
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 7.1e-14 83.2 419 27.9
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 1.2e-13 82.4 438 26.0
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 2.1e-13 81.6 155 34.8
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 2.1e-13 81.6 300 29.7
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 4.6e-13 80.5 109 45.0
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 1.0e-12 79.3 389 28.3
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 1.0e-12 79.3 192 35.9
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 1.3e-12 79.0 436 28.4
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 2.3e-12 78.2 192 34.9
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 3.0e-12 77.8 125 41.6
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 3.9e-12 77.4 151 32.5
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 8.6e-12 76.3 383 29.8
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 8.6e-12 76.3 129 36.4
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 1.9e-11 75.1 116 43.1
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 1.9e-11 75.1 133 39.8
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 2.5e-11 74.7 143 32.9
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 2.5e-11 74.7 192 33.9
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 3.3e-11 74.3 167 37.1
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 4.3e-11 73.9 319 28.8
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 1.2e-10 72.4 146 38.4
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 6.2e-10 70.1 396 27.8
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 1.4e-09 68.9 109 41.3
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 4.0e-09 67.4 159 34.6
PSO478G2008 Papaver somniferum HOM05D000283 ORTHO05D006673 8.9e-09 66.2 121 38.8
Lalb_Chr02g0143851 Lupinus albus HOM05D000283 ORTHO05D006673 2.6e-08 64.7 117 39.3
Eucgr.G02778 Eucalyptus grandis HOM05D000283 ORTHO05D006673 4.4e-08 63.9 148 29.7
PSO782G0271 Papaver somniferum HOM05D000283 ORTHO05D006673 5.8e-08 63.5 158 34.8
PGSC0003DMG400011503 Solanum tuberosum HOM05D000283 ORTHO05D006673 9.9e-08 62.8 73 54.8
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 6.4e-07 60.1 152 33.6
THA.LOC104799366 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 7.1e-06 56.6 285 27.0


User provided reference genes

Program Settings