Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011487 Solanum tuberosum HOM05D000283 ORTHO05D006673 0.0e+00 1642.9 834 100.0
PGSC0003DMG400011471 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.3e-261 906.7 881 62.7
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 4.7e-240 835.1 1012 54.1
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 5.1e-226 788.5 1118 48.5
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 3.6e-216 755.7 1088 48.5
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 4.7e-216 755.4 1108 47.4
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.4e-207 727.2 1193 44.9
Sopen04g005270 Solanum pennellii HOM05D000283 ORTHO05D006673 8.4e-197 691.4 1119 45.3
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 2.3e-194 683.3 1185 43.8
Sopen04g005310 Solanum pennellii HOM05D000283 ORTHO05D006673 1.7e-181 640.6 902 48.8
Solyc04g010155.2 Solanum lycopersicum HOM05D000283 ORTHO05D006673 8.6e-133 478.8 559 55.5
PGSC0003DMG400011472 Solanum tuberosum HOM05D000283 ORTHO05D006673 6.4e-128 462.6 703 46.2
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 3.9e-125 453.4 875 41.0
PGSC0003DMG400011488 Solanum tuberosum HOM05D000283 ORTHO05D006673 8.0e-123 445.7 433 61.2
Sopen04g005330 Solanum pennellii HOM05D000283 ORTHO05D006673 4.4e-121 439.9 737 45.3
PGSC0003DMG400011484 Solanum tuberosum HOM05D000283 ORTHO05D006673 4.3e-100 370.2 788 42.1
Sopen04g005300 Solanum pennellii HOM05D000283 ORTHO05D006673 1.3e-96 358.6 632 43.5
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-82 312.0 344 57.3
Sopen04g005350 Solanum pennellii HOM05D000283 ORTHO05D006673 8.1e-75 286.2 691 39.8
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 5.3e-66 256.9 1134 27.8
PGSC0003DMG400039757 Solanum tuberosum HOM05D000283 ORTHO05D006673 6.3e-59 233.4 178 70.8
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 7.7e-57 226.5 1153 27.1
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.2e-56 224.9 1088 27.0
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.7e-54 218.0 1088 26.8
PGSC0003DMG400037112 Solanum tuberosum HOM05D000283 ORTHO05D006673 8.2e-51 206.5 309 46.6
PGSC0003DMG400042471 Solanum tuberosum HOM05D000283 ORTHO05D006673 7.7e-49 199.9 208 56.2
Sopen04g005290 Solanum pennellii HOM05D000312 ORTHO05D000221 4.2e-47 194.1 575 34.6
CAN.G786.35 Capsicum annuum HOM05D000283 ORTHO05D006673 4.8e-43 180.6 137 70.8
Solyc04g010180.4 Solanum lycopersicum HOM05D000283 ORTHO05D006673 9.4e-39 166.4 158 57.6
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 8.0e-38 163.3 425 33.9
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 2.3e-37 161.8 409 35.9
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 3.0e-37 161.4 421 34.4
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 2.6e-36 158.3 1128 25.2
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 3.3e-36 157.9 1187 25.1
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 4.8e-35 154.1 1030 24.6
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 6.3e-35 153.7 1072 24.8
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 1.4e-34 152.5 423 32.4
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 1.8e-34 152.1 480 34.6
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 5.3e-34 150.6 434 34.3
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 2.7e-33 148.3 1150 24.1
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 4.5e-33 147.5 501 33.3
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 4.5e-33 147.5 435 33.6
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 7.7e-33 146.7 1120 25.7
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 1.0e-32 146.4 448 34.4
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 1.3e-32 146.0 535 29.3
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 5.0e-32 144.1 486 32.1
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 6.5e-32 143.7 412 32.0
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 8.5e-32 143.3 1067 24.6
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 1.1e-31 142.9 627 29.0
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 2.5e-31 141.7 486 32.3
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 3.2e-31 141.4 474 30.2
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 5.5e-31 140.6 395 34.4
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 1.6e-30 139.0 459 33.8
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 5.2e-29 134.0 433 30.5
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 1.2e-28 132.9 486 31.1
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 2.6e-28 131.7 1107 24.6
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 2.6e-28 131.7 449 30.7
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 4.4e-28 131.0 425 34.8
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 5.7e-28 130.6 534 28.7
PGSC0003DMG400011503 Solanum tuberosum HOM05D000283 ORTHO05D006673 9.8e-28 129.8 171 48.5
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 1.7e-27 129.0 438 34.0
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 2.2e-27 128.6 499 32.5
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 3.1e-26 124.8 650 26.8
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 3.1e-26 124.8 948 24.9
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 4.1e-26 124.4 420 31.9
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 7.0e-26 123.6 400 32.0
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 2.0e-25 122.1 462 32.9
Lalb_Chr02g0143851 Lupinus albus HOM05D000283 ORTHO05D006673 1.7e-24 119.0 596 27.9
Atru.chr12.593 Acer truncatum HOM05D000283 ORTHO05D006673 8.5e-24 116.7 441 30.2
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 8.5e-24 116.7 413 31.7
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 2.5e-23 115.2 423 31.7
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 8.0e-22 110.2 898 24.2
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 3.0e-21 108.2 389 32.6
PSO478G2008 Papaver somniferum HOM05D000283 ORTHO05D006673 2.6e-20 105.1 451 29.7
Potri.010G213800 Populus trichocarpa HOM05D000283 ORTHO05D006673 5.7e-20 104.0 614 27.2
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 3.7e-19 101.3 170 37.1
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 1.8e-18 99.0 392 30.1
Eucgr.G02778 Eucalyptus grandis HOM05D000283 ORTHO05D006673 2.4e-18 98.6 448 26.6
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 9.2e-18 96.7 386 31.1
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 4.5e-17 94.4 386 30.8
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 1.3e-16 92.8 386 30.6
PSO782G0271 Papaver somniferum HOM05D000283 ORTHO05D006673 2.9e-16 91.7 528 27.5
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 6.6e-16 90.5 454 27.8
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 1.9e-15 89.0 407 26.3
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 3.3e-15 88.2 387 30.2
Sopen04g005280 Solanum pennellii HOM05D000283 ORTHO05D006673 4.3e-15 87.8 88 60.2
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 2.1e-14 85.5 384 29.7
Actinidia29198 Actinidia chinensis HOM05D000283 ORTHO05D006673 3.6e-14 84.7 536 27.2
PGSC0003DMG400011490 Solanum tuberosum HOM05D000283 ORTHO05D006673 8.0e-14 83.6 107 55.1
THA.LOC104809887 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 5.7e-12 77.4 384 29.2
MD01G1117200 Malus domestica HOM05D000283 ORTHO05D006673 1.7e-11 75.9 549 24.4
PGSC0003DMG400011489 Solanum tuberosum HOM05D000283 ORTHO05D395996 1.1e-10 73.2 146 39.7
Solyc04g010130.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 7.0e-10 70.5 84 48.8
Sed0026677 Sechium edule HOM05D000283 ORTHO05D006673 1.7e-08 65.9 856 23.4
Sp6g30440 Schrenkiella parvula HOM05D010678 ORTHO05D006673 2.5e-07 62.0 389 26.2
ClCG09G020330 Citrullus lanatus HOM05D000283 ORTHO05D006673 1.2e-06 59.7 790 23.8
A02p02040 Brassica napus HOM05D010678 ORTHO05D006673 4.7e-06 57.8 390 24.9
Sopen03g020050 Solanum pennellii HOM05D000002 ORTHO05D000001 4.7e-06 57.8 42 66.7
CsaV3_5G026100 Cucumis sativus L. HOM05D000283 ORTHO05D006673 8.0e-06 57.0 289 26.3


User provided reference genes

Program Settings