Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011392 Solanum tuberosum HOM05D003896 ORTHO05D004517 8.9e-63 243.4 122 100.0
Sopen09g029690 Solanum pennellii HOM05D003896 ORTHO05D004517 1.1e-17 93.6 62 71.0
Solyc09g074870.4 Solanum lycopersicum HOM05D003896 ORTHO05D004517 1.5e-17 93.2 63 68.3
Nitab4.5_0005474g0030 Nicotiana tabacum HOM05D003896 ORTHO05D004517 2.5e-17 92.4 88 55.7
Peaxi162Scf00067g02527 Petunia axillaris HOM05D003896 ORTHO05D004517 4.3e-17 91.7 61 68.9
CAN.G339.36 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-16 89.7 69 65.2
C08p45150 Brassica napus HOM05D003896 ORTHO05D004517 6.2e-16 87.8 138 40.6
A06p11120 Brassica napus HOM05D003896 ORTHO05D004517 1.4e-15 86.7 108 50.9
C05p13240 Brassica napus HOM05D003896 ORTHO05D004517 1.4e-15 86.7 62 64.5
Aa31LG1G40 Aethionema arabicum HOM05D003702 ORTHO05D004653 1.8e-15 86.3 61 65.6
BraA06t24292Z Brassica rapa HOM05D003896 ORTHO05D004517 1.8e-15 86.3 61 65.6
Nitab4.5_0004027g0040 Nicotiana tabacum HOM05D003896 ORTHO05D004517 2.4e-15 85.9 61 67.2
A09p61560 Brassica napus HOM05D003896 ORTHO05D004517 3.1e-15 85.5 129 42.6
BraA09t41529Z Brassica rapa HOM05D003896 ORTHO05D004517 3.1e-15 85.5 129 42.6
Nitab4.5_0000078g0350 Nicotiana tabacum HOM05D003896 ORTHO05D004517 4.0e-15 85.1 60 68.3
BcaB02g06577 Brassica carinata HOM05D003896 ORTHO05D004517 6.9e-15 84.3 61 63.9
Thhalv10009667m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 6.9e-15 84.3 61 62.3
TAR381G0439 Trochodendron aralioides HOM05D003896 ORTHO05D004517 6.9e-15 84.3 64 60.9
BolC5t30061H Brassica oleracea HOM05D003896 ORTHO05D004517 9.0e-15 84.0 61 62.3
BcaC05g25441 Brassica carinata HOM05D003896 ORTHO05D004517 1.2e-14 83.6 60 63.3
CAN.G339.37 Capsicum annuum HOM05D003896 ORTHO05D004517 1.5e-14 83.2 60 65.0
CARHR015640 Cardamine hirsuta HOM05D003896 ORTHO05D004517 1.5e-14 83.2 61 60.7
Solyc09g150155.1 Solanum lycopersicum HOM05D003896 ORTHO05D004517 1.5e-14 83.2 60 65.0
AL1G27180 Arabidopsis lyrata HOM05D003896 ORTHO05D004517 2.6e-14 82.4 60 61.7
Sp1g13460 Schrenkiella parvula HOM05D003896 ORTHO05D004517 2.6e-14 82.4 60 61.7
BcaC07g38769 Brassica carinata HOM05D003896 ORTHO05D004517 3.4e-14 82.0 71 54.9
BraA08t35095Z Brassica rapa HOM05D003896 ORTHO05D004517 3.4e-14 82.0 68 55.9
Oeu012724.1 Olea europaea HOM05D003896 ORTHO05D004517 3.4e-14 82.0 62 59.7
PGSC0003DMG400011391 Solanum tuberosum HOM05D003896 ORTHO05D004517 3.4e-14 82.0 61 62.3
Eucgr.I02701 Eucalyptus grandis HOM05D003896 ORTHO05D004517 5.8e-14 81.3 61 62.3
THA.LOC109116537 Tarenaya hassleriana HOM05D003896 ORTHO05D004517 5.8e-14 81.3 61 60.7
BcaB03g14560 Brassica carinata HOM05D003896 ORTHO05D004517 7.6e-14 80.9 60 60.0
BolC8t52063H Brassica oleracea HOM05D003896 ORTHO05D004517 9.9e-14 80.5 89 46.1
Thhalv10001040m.g Eutrema salsugineum HOM05D003896 ORTHO05D004517 9.9e-14 80.5 69 53.6
ATR0772G203 Amborella trichopoda HOM05D003896 ORTHO05D004517 1.3e-13 80.1 61 59.0
AT1G15120 Arabidopsis thaliana HOM05D003896 ORTHO05D004517 1.3e-13 80.1 61 59.0
BolC2t10995H Brassica oleracea HOM05D003896 ORTHO05D004517 1.7e-13 79.7 61 59.0
BraA02t08170Z Brassica rapa HOM05D003896 ORTHO05D004517 1.7e-13 79.7 72 52.8
Migut.N01017 Erythranthe guttata HOM05D003896 ORTHO05D004517 1.7e-13 79.7 63 55.6
Sabra05G0145900 Salix brachista HOM05D003896 ORTHO05D004517 1.7e-13 79.7 62 61.3
AT2G01090 Arabidopsis thaliana HOM05D003896 ORTHO05D004517 2.2e-13 79.3 52 63.5
A08p31730 Brassica napus HOM05D003896 ORTHO05D004517 2.2e-13 79.3 60 60.0
C08p17020 Brassica napus HOM05D003896 ORTHO05D004517 2.2e-13 79.3 60 60.0
BolC8t49327H Brassica oleracea HOM05D003896 ORTHO05D004517 2.2e-13 79.3 60 60.0
Haze_10788 Corylus avellana HOM05D003896 ORTHO05D004517 2.2e-13 79.3 80 51.2
Migut.B00649 Erythranthe guttata HOM05D003896 ORTHO05D004517 2.2e-13 79.3 61 60.7
Sc02g0004100 Simmondsia chinensis HOM05D003896 ORTHO05D004517 2.2e-13 79.3 61 57.4
unitig_578.g15948 Utricularia gibba HOM05D003896 ORTHO05D004517 2.9e-13 79.0 68 51.5
Potri.002G069301 Populus trichocarpa HOM05D003896 ORTHO05D004517 3.8e-13 78.6 51 64.7
THA.LOC109117087 Tarenaya hassleriana HOM05D003896 ORTHO05D004517 3.8e-13 78.6 61 59.0
Carub.0001s1488 Capsella rubella HOM05D003896 ORTHO05D004517 4.9e-13 78.2 61 57.4
Nn1g06112 Nelumbo nucifera HOM05D003896 ORTHO05D004517 4.9e-13 78.2 62 56.5
Potri.002G069200 Populus trichocarpa HOM05D003896 ORTHO05D004517 4.9e-13 78.2 68 55.9
BcaB03g13075 Brassica carinata HOM05D003896 ORTHO05D004517 6.4e-13 77.8 61 59.0
A02p31670 Brassica napus HOM05D003896 ORTHO05D004517 6.4e-13 77.8 59 59.3
C02p49010 Brassica napus HOM05D003896 ORTHO05D004517 6.4e-13 77.8 59 59.3
Gorai.002G001600 Gossypium raimondii HOM05D003896 ORTHO05D004517 6.4e-13 77.8 64 57.8
Aqoxy2G00844 Aquilegia oxysepala HOM05D003896 ORTHO05D004517 8.4e-13 77.4 64 56.2
Cpa.g.sc2.46 Carica papaya HOM05D003896 ORTHO05D004517 8.4e-13 77.4 60 60.0
Dinv24242 Davidia involucrata HOM05D003896 ORTHO05D004517 8.4e-13 77.4 64 57.8
Gohir.A12G033300 Gossypium hirsutum HOM05D003896 ORTHO05D004517 8.4e-13 77.4 64 57.8
Gohir.D12G039500 Gossypium hirsutum HOM05D003896 ORTHO05D004517 8.4e-13 77.4 64 57.8
Nitab4.5_0013344g0010 Nicotiana tabacum HOM05D003896 ORTHO05D004517 8.4e-13 77.4 41 80.5
Peaxi162Scf00152g01234 Petunia axillaris HOM05D003896 ORTHO05D004517 8.4e-13 77.4 73 54.8
Actinidia00232 Actinidia chinensis HOM05D003896 ORTHO05D004517 1.1e-12 77.0 61 57.4
CANSAT11G1560 Cannabis sativa HOM05D003896 ORTHO05D004517 1.1e-12 77.0 61 55.7
AUR62035137 Chenopodium quinoa HOM05D003896 ORTHO05D004517 1.1e-12 77.0 62 58.1
Duzib132G0061 Durio zibethinus HOM05D003896 ORTHO05D004517 1.1e-12 77.0 61 59.0
Gorai.008G041200 Gossypium raimondii HOM05D003896 ORTHO05D004517 1.1e-12 77.0 77 53.2
TWI23G0468 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 1.1e-12 77.0 61 59.0
Aa31LG2G8780 Aethionema arabicum HOM05D003896 ORTHO05D004517 1.4e-12 76.6 52 59.6
CDE04G0116 Ceratophyllum demersum HOM05D003896 ORTHO05D004517 1.4e-12 76.6 62 58.1
RcHm_v2.0_Chr7g0225181 Rosa chinensis HOM05D003896 ORTHO05D004517 1.4e-12 76.6 60 60.0
Atru.chr6.939 Acer truncatum HOM05D003896 ORTHO05D004517 1.9e-12 76.3 61 57.4
AUR62042907 Chenopodium quinoa HOM05D003896 ORTHO05D004517 1.9e-12 76.3 61 59.0
Dinv19332 Davidia involucrata HOM05D003896 ORTHO05D004517 1.9e-12 76.3 52 59.6
Duzib052G0314 Durio zibethinus HOM05D003896 ORTHO05D004517 1.9e-12 76.3 61 57.4
Duzib248G1617 Durio zibethinus HOM05D003896 ORTHO05D004517 1.9e-12 76.3 64 56.2
Gohir.D01G001100 Gossypium hirsutum HOM05D003896 ORTHO05D004517 1.9e-12 76.3 61 57.4
Nn5g28709 Nelumbo nucifera HOM05D003896 ORTHO05D004517 1.9e-12 76.3 52 59.6
Prupe.1G560700 Prunus persica HOM05D003896 ORTHO05D004517 1.9e-12 76.3 51 62.7
PGR142G1796 Punica granatum HOM05D003896 ORTHO05D004517 1.9e-12 76.3 51 62.7
Actinidia38960 Actinidia chinensis HOM05D003896 ORTHO05D004517 2.4e-12 75.9 61 57.4
Aqoxy5G02118 Aquilegia oxysepala HOM05D003896 ORTHO05D004517 2.4e-12 75.9 59 61.0
Duzib132G0328 Durio zibethinus HOM05D003896 ORTHO05D004517 2.4e-12 75.9 51 66.7
CARHR143640 Cardamine hirsuta HOM05D003896 ORTHO05D004517 3.2e-12 75.5 53 60.4
MELO3C019495.2 Cucumis melo HOM05D003896 ORTHO05D004517 3.2e-12 75.5 62 56.5
CsaV3_3G018780 Cucumis sativus L. HOM05D003896 ORTHO05D004517 3.2e-12 75.5 62 56.5
FAN13G2961 Fragaria x ananassa HOM05D003896 ORTHO05D004517 3.2e-12 75.5 60 58.3
HanXRQChr11g0337591 Helianthus annuus HOM05D003896 ORTHO05D004517 3.2e-12 75.5 75 45.3
MBI13_g20498_MAGBIO Magnolia biondii HOM05D003896 ORTHO05D004517 3.2e-12 75.5 51 62.7
MBI13_g29655_MAGBIO Magnolia biondii HOM05D003896 ORTHO05D004517 3.2e-12 75.5 51 62.7
Medtr2g008070 Medicago truncatula HOM05D003896 ORTHO05D004517 3.2e-12 75.5 60 56.7
QL11p018723 Quercus lobata HOM05D003896 ORTHO05D004517 3.2e-12 75.5 55 58.2
Sed0011383 Sechium edule HOM05D003896 ORTHO05D004517 3.2e-12 75.5 63 55.6
TPR.G19749 Trifolium pratense HOM05D003896 ORTHO05D004517 3.2e-12 75.5 81 49.4
CDE04G2322 Ceratophyllum demersum HOM05D003896 ORTHO05D004517 4.2e-12 75.1 52 57.7
EL10Ac1g01528 Beta vulgaris HOM05D003896 ORTHO05D004517 5.4e-12 74.7 67 53.7
CiPaw.06G150500 Carya illinoinensis HOM05D003896 ORTHO05D004517 5.4e-12 74.7 61 57.4
Sed0019459 Sechium edule HOM05D003896 ORTHO05D004517 5.4e-12 74.7 60 58.3
Lj6g0000311 Lotus japonicus HOM05D003896 ORTHO05D004517 7.1e-12 74.3 61 55.7
Psat1g218920 Pisum sativum HOM05D003896 ORTHO05D004517 7.1e-12 74.3 61 55.7
Sc26g0002640 Simmondsia chinensis HOM05D003896 ORTHO05D004517 7.1e-12 74.3 62 56.5
TWI14G0008 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 7.1e-12 74.3 61 57.4
arahy.Tifrunner.gnm1.ann1.D7TB4J Arachis hypogaea HOM05D003896 ORTHO05D004517 9.3e-12 73.9 51 60.8
arahy.Tifrunner.gnm1.ann1.EN81KK Arachis hypogaea HOM05D003896 ORTHO05D004517 9.3e-12 73.9 51 60.8
CiPaw.05G040300 Carya illinoinensis HOM05D003896 ORTHO05D004517 9.3e-12 73.9 61 54.1
FvH4_5g30500 Fragaria vesca HOM05D003896 ORTHO05D004517 9.3e-12 73.9 61 55.7
FAN04G1676 Fragaria x ananassa HOM05D003896 ORTHO05D004517 9.3e-12 73.9 61 55.7
FAN18G4256 Fragaria x ananassa HOM05D003896 ORTHO05D004517 9.3e-12 73.9 61 55.7
Manes.02G178600 Manihot esculenta HOM05D003896 ORTHO05D004517 1.2e-11 73.6 51 64.7
Manes.18G091100 Manihot esculenta HOM05D003896 ORTHO05D004517 1.2e-11 73.6 51 62.7
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 1.2e-11 73.6 93 47.3
Thecc.02G044000 Theobroma cacao HOM05D003896 ORTHO05D004517 1.2e-11 73.6 51 58.8
Os11g0162200 Oryza sativa ssp. japonica HOM05D003896 ORTHO05D004517 1.6e-11 73.2 61 54.1
AagrBONN_evm.TU.Sc2ySwM_228.2620 Anthoceros agrestis HOM05D003896 ORTHO05D004517 2.1e-11 72.8 59 54.2
arahy.Tifrunner.gnm1.ann1.Q4HF2T Arachis hypogaea HOM05D003896 ORTHO05D004517 2.1e-11 72.8 61 55.7
Gohir.A01G001400 Gossypium hirsutum HOM05D003896 ORTHO05D004517 2.1e-11 72.8 61 54.1
vmacro22914 Vaccinium macrocarpon HOM05D003896 ORTHO05D004517 2.1e-11 72.8 51 58.8
FAN08G0225 Fragaria x ananassa HOM05D003896 ORTHO05D004517 2.7e-11 72.4 62 53.2
Glyma.08G181800 Glycine max HOM05D003896 ORTHO05D004517 2.7e-11 72.4 51 62.7
Phvul.006G209400 Phaseolus vulgaris HOM05D003896 ORTHO05D004517 2.7e-11 72.4 61 57.4
TAR625G1245 Trochodendron aralioides HOM05D003896 ORTHO05D004517 2.7e-11 72.4 59 55.9
arahy.Tifrunner.gnm1.ann1.MYBE61 Arachis hypogaea HOM05D003896 ORTHO05D004517 3.5e-11 72.0 60 56.7
CSS0003096 Camellia sinensis var. sinensis HOM05D003896 ORTHO05D004517 3.5e-11 72.0 52 57.7
CSS0009103 Camellia sinensis var. sinensis HOM05D003896 ORTHO05D004517 3.5e-11 72.0 52 57.7
ClCG05G009840 Citrullus lanatus HOM05D003896 ORTHO05D004517 4.6e-11 71.6 34 82.4
Atru.chr6.943 Acer truncatum HOM05D003896 ORTHO05D004517 6.0e-11 71.2 32 84.4
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 6.0e-11 71.2 65 50.8
Glyma.15G050500 Glycine max HOM05D003896 ORTHO05D004517 6.0e-11 71.2 51 60.8
GSVIVG01034509001 Vitis vinifera HOM05D003896 ORTHO05D004517 6.0e-11 71.2 60 53.3
ECA236G2466 Erigeron canadensis HOM05D003896 ORTHO05D004517 7.9e-11 70.9 61 50.8
MD08G1223400 Malus domestica HOM05D003896 ORTHO05D004517 7.9e-11 70.9 51 58.8
Potri.005G190901 Populus trichocarpa HOM05D003896 ORTHO05D004517 7.9e-11 70.9 61 52.5
VMungo0540G0553 Vigna mungo HOM05D000025 ORTHO05D000136 7.9e-11 70.9 51 58.8
Dinv05188 Davidia involucrata HOM05D003896 ORTHO05D004517 1.0e-10 70.5 61 50.8
Pp3c19_20470 Physcomitrium patens HOM05D003896 ORTHO05D004517 1.3e-10 70.1 81 46.9
Dinv01060 Davidia involucrata HOM05D003896 ORTHO05D004517 1.8e-10 69.7 61 50.8
Thecc.08G150500 Theobroma cacao HOM05D003896 ORTHO05D004517 2.3e-10 69.3 61 52.5
TAR628G1659 Trochodendron aralioides HOM05D003896 ORTHO05D004517 2.3e-10 69.3 52 51.9
Lsat_1_v5_gn_7_79760 Lactuca sativa HOM05D003896 ORTHO05D004517 3.0e-10 68.9 42 64.3
SalBow6G5306 Salvia bowleyana HOM05D003896 ORTHO05D004517 3.0e-10 68.9 51 52.9
SMO117G0126 Selaginella moellendorffii HOM05D003896 ORTHO05D004517 3.0e-10 68.9 58 55.2
Zm00001eb202390 Zea mays HOM05D003896 ORTHO05D004517 3.0e-10 68.9 77 48.1
FAN07G2777 Fragaria x ananassa HOM05D003896 ORTHO05D004517 3.9e-10 68.6 72 47.2
Manes.18G073709 Manihot esculenta HOM05D003896 ORTHO05D004517 3.9e-10 68.6 54 55.6
Manes.18G090900 Manihot esculenta HOM05D003896 ORTHO05D004517 3.9e-10 68.6 54 55.6
HanXRQChr11g0337581 Helianthus annuus HOM05D003896 ORTHO05D004517 5.1e-10 68.2 45 62.2
Atru.chr13.2169 Acer truncatum HOM05D003896 ORTHO05D004517 6.7e-10 67.8 61 49.2
Ciclev10002923m.g Citrus clementina HOM05D003896 ORTHO05D004517 6.7e-10 67.8 61 50.8
FvH4_7g02900 Fragaria vesca HOM05D003896 ORTHO05D004517 8.7e-10 67.4 51 56.9
FAN03G2302 Fragaria x ananassa HOM05D003896 ORTHO05D004517 8.7e-10 67.4 61 50.8
FAN12G2386 Fragaria x ananassa HOM05D003896 ORTHO05D004517 8.7e-10 67.4 61 50.8
FAN17G0735 Fragaria x ananassa HOM05D003896 ORTHO05D004517 8.7e-10 67.4 51 54.9
Lsat_1_v5_gn_9_116680 Lactuca sativa HOM05D003896 ORTHO05D004517 1.5e-09 66.6 86 41.9
MD05G1023300 Malus domestica HOM05D003896 ORTHO05D004517 1.5e-09 66.6 51 54.9
Pp3c26_10210 Physcomitrium patens HOM05D003896 ORTHO05D004517 1.5e-09 66.6 51 56.9
Pp3c26_10390 Physcomitrium patens HOM05D003896 ORTHO05D004517 1.5e-09 66.6 51 56.9
unitig_8.g2965 Utricularia gibba HOM05D003896 ORTHO05D004517 1.9e-09 66.2 33 72.7
Mapoly0020s0072 Marchantia polymorpha HOM05D003896 ORTHO05D004517 3.3e-09 65.5 59 49.2
Prupe.8G028000 Prunus persica HOM05D003896 ORTHO05D004517 4.3e-09 65.1 64 46.9
Hma1.2p1_1800F.1_g302950 Hydrangea macrophylla HOM05D003896 ORTHO05D004517 5.6e-09 64.7 60 50.0
FAN06G4594 Fragaria x ananassa HOM05D003896 ORTHO05D004517 7.4e-09 64.3 51 54.9
CBR_g10999 Chara braunii HOM05D003896 ORTHO05D004517 9.6e-09 63.9 58 50.0
COL.COLO4_37834 Corchorus olitorius HOM05D004026 ORTHO05D004712 1.6e-08 63.2 72 44.4
TWI34G0745 Tripterygium wilfordii HOM05D003896 ORTHO05D004517 2.1e-08 62.8 51 52.9
PSO210G7830 Papaver somniferum HOM05D003896 ORTHO05D004517 2.8e-08 62.4 61 47.5
PSO238G0030 Papaver somniferum HOM05D003896 ORTHO05D004517 2.8e-08 62.4 61 47.5
Gohir.A02G111100 Gossypium hirsutum HOM05D003896 ORTHO05D004517 6.2e-08 61.2 61 49.2
Gohir.D03G062900 Gossypium hirsutum HOM05D003896 ORTHO05D004517 8.1e-08 60.8 47 53.2
Gorai.013G108600 Gossypium raimondii HOM05D003896 ORTHO05D004517 8.1e-08 60.8 47 53.2
Zm00001eb139450 Zea mays HOM05D003896 ORTHO05D004517 2.4e-07 59.3 30 73.3
Duzib116G0919 Durio zibethinus HOM05D003896 ORTHO05D004517 3.1e-07 58.9 61 47.5
PRCOL_00005271 Prasinoderma coloniale HOM05D003896 ORTHO05D004517 9.0e-07 57.4 48 54.2
MCO16G078 Micromonas commoda HOM05D003896 ORTHO05D004517 3.4e-06 55.5 51 45.1


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