Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 2.1e-39 165.2 83 100.0
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 2.8e-36 154.8 83 95.2
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 2.8e-36 154.8 83 95.2
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 4.2e-32 141.0 81 82.7
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 7.7e-26 120.2 81 69.1
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 7.7e-26 120.2 81 70.4
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 7.7e-26 120.2 82 72.0
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 2.9e-25 118.2 81 69.1
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 6.5e-25 117.1 79 72.2
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 1.9e-24 115.5 80 67.5
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 2.5e-24 115.2 81 69.1
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 7.2e-24 113.6 80 67.5
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 1.2e-23 112.8 81 66.7
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 1.6e-23 112.5 80 67.5
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 1.6e-23 112.5 80 67.5
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 2.1e-23 112.1 80 67.5
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 2.1e-23 112.1 81 66.7
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 2.7e-23 111.7 80 66.2
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 2.7e-23 111.7 80 65.0
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 2.7e-23 111.7 82 69.5
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 3.6e-23 111.3 79 65.8
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 6.1e-23 110.5 80 65.0
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 6.1e-23 110.5 81 61.7
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 6.1e-23 110.5 80 63.8
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 8.0e-23 110.2 81 69.1
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 8.0e-23 110.2 80 66.2
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 3.0e-22 108.2 80 63.8
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 4.0e-22 107.8 79 60.8
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 5.2e-22 107.5 83 60.2
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 6.7e-22 107.1 74 68.9
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 1.1e-21 106.3 78 64.1
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.1e-21 106.3 77 63.6
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.5e-21 105.9 71 67.6
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 2.6e-21 105.1 80 62.5
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 3.3e-21 104.8 75 64.0
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 3.3e-21 104.8 70 72.9
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 3.3e-21 104.8 73 67.1
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 5.7e-21 104.0 68 70.6
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 7.5e-21 103.6 77 62.3
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 9.7e-21 103.2 80 62.5
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.3e-20 102.8 69 68.1
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 1.3e-20 102.8 83 62.7
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 1.7e-20 102.4 80 65.0
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 2.2e-20 102.1 79 58.2
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 2.8e-20 101.7 64 73.4
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 3.7e-20 101.3 73 65.8
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 3.7e-20 101.3 77 61.0
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 3.7e-20 101.3 70 67.1
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 3.7e-20 101.3 69 71.0
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 4.8e-20 100.9 84 60.7
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 1.1e-19 99.8 83 57.8
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 1.1e-19 99.8 79 63.3
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 1.4e-19 99.4 78 56.4
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.8e-19 99.0 69 69.6
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 2.4e-19 98.6 80 57.5
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 2.4e-19 98.6 80 63.8
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 4.1e-19 97.8 69 69.6
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 5.3e-19 97.4 78 55.1
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 5.3e-19 97.4 78 55.1
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 7.0e-19 97.1 79 55.7
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 7.0e-19 97.1 80 56.2
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 9.1e-19 96.7 78 55.1
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 1.2e-18 96.3 78 53.8
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 1.6e-18 95.9 68 67.6
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 2.0e-18 95.5 78 53.8
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 2.7e-18 95.1 78 53.8
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 2.7e-18 95.1 78 52.6
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 3.5e-18 94.7 69 68.1
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 4.5e-18 94.4 79 60.8
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 7.7e-18 93.6 77 54.5
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 1.0e-17 93.2 110 45.5
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 1.0e-17 93.2 78 52.6
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 2.9e-17 91.7 69 63.8
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 3.8e-17 91.3 61 67.2
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 3.8e-17 91.3 79 54.4
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 6.5e-17 90.5 78 52.6
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 2.5e-16 88.6 66 62.1
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 3.2e-16 88.2 76 56.6
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 4.2e-16 87.8 68 55.9
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 4.2e-16 87.8 68 55.9
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 4.2e-16 87.8 62 67.7
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 5.5e-16 87.4 65 64.6
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 7.2e-16 87.0 66 57.6
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 7.2e-16 87.0 66 57.6
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 1.2e-15 86.3 55 70.9
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 1.6e-15 85.9 62 66.1
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 3.6e-15 84.7 65 66.2
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 6.1e-15 84.0 62 67.7
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 2.3e-14 82.0 78 53.8
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 3.0e-14 81.6 61 65.6
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 8.8e-14 80.1 50 78.0
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 2.2e-12 75.5 58 58.6
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 2.8e-12 75.1 57 59.6
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 8.3e-12 73.6 64 60.9
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.1e-11 71.6 62 53.2
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 4.1e-11 71.2 49 67.3
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 5.4e-11 70.9 62 53.2
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 1.7e-09 65.9 53 50.9
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 2.9e-09 65.1 46 60.9
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 5.5e-08 60.8 47 53.2
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 2.3e-06 55.5 54 51.9


User provided reference genes

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