Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 1.6e-37 159.8 148 100.0
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 3.3e-35 152.1 149 93.3
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 1.6e-34 149.8 149 89.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 9.2e-22 107.5 150 49.3
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 5.1e-20 101.7 139 79.1
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 2.1e-18 96.3 128 83.6
CAN.G129.20 Capsicum annuum HOM05D006719 ORTHO05D007063 1.1e-17 94.0 137 82.5
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 4.0e-17 92.0 151 70.9
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 3.7e-15 85.5 149 74.5
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.4e-14 83.6 149 63.8
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.4e-14 83.6 149 63.8
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 1.4e-14 83.6 154 74.0
Nitab4.5_0000960g0100 Nicotiana tabacum HOM05D006719 ORTHO05D007063 2.4e-14 82.8 151 72.8
Nitab4.5_0005076g0040 Nicotiana tabacum HOM05D006719 ORTHO05D007063 1.2e-13 80.5 149 73.2
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 6.0e-13 78.2 150 66.7
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 6.0e-13 78.2 150 66.7
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.3e-12 77.0 149 67.8
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 5.1e-12 75.1 147 69.4
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 8.6e-12 74.3 149 65.8
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 4.3e-11 72.0 149 59.7
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 7.3e-11 71.2 149 64.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 7.3e-11 71.2 147 66.0
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.7e-10 68.6 147 65.3
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 3.1e-09 65.9 147 55.1
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 3.1e-09 65.9 148 37.2
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.5e-08 63.5 129 64.3
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.5e-08 63.5 147 63.9
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.5e-08 63.5 124 72.6
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.5e-08 63.5 143 70.6
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.0e-08 63.2 131 68.7
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.6e-08 62.8 127 65.4
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 3.4e-08 62.4 149 59.7
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 3.4e-08 62.4 141 63.1
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 9.9e-08 60.8 148 60.1
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 1.7e-07 60.1 127 67.7
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 1.7e-07 60.1 136 66.2
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 1.7e-07 60.1 136 69.1
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 2.2e-07 59.7 52 63.5
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.2e-07 59.7 124 61.3
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 2.9e-07 59.3 149 69.1
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 2.9e-07 59.3 150 56.0
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 3.8e-07 58.9 141 58.9
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 6.4e-07 58.2 52 63.5
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.1e-06 57.4 148 62.2
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 1.1e-06 57.4 143 69.9
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.1e-06 57.4 138 66.7
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 1.4e-06 57.0 140 55.7
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 1.9e-06 56.6 155 65.8
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 1.9e-06 56.6 107 72.0
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.4e-06 56.2 148 60.8
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 2.4e-06 56.2 126 70.6
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 5.4e-06 55.1 149 63.1
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 5.4e-06 55.1 146 51.4
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 7.1e-06 54.7 125 68.0
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 9.2e-06 54.3 50 62.0


User provided reference genes

Program Settings