Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.4e-204 716.1 359 100.0
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.9e-201 705.7 359 98.3
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 9.2e-201 703.4 359 98.1
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.3e-173 613.2 379 83.4
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 9.0e-172 607.1 361 85.0
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 7.6e-171 604.0 354 85.6
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.4e-163 578.6 365 81.9
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.4e-143 513.5 359 73.5
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.9e-138 495.7 355 68.7
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.9e-138 495.7 355 68.7
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.2e-133 479.6 355 69.0
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 3.1e-132 475.7 347 69.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.1e-132 474.2 356 67.4
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-131 473.0 356 67.4
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 4.5e-131 471.9 367 67.0
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-130 470.3 356 66.9
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 2.9e-130 469.2 357 67.2
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.6e-128 463.4 351 66.1
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 4.7e-128 461.8 352 67.0
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 6.1e-128 461.5 357 63.6
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 6.3e-125 451.4 351 65.2
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 5.3e-124 448.4 359 64.1
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 9.1e-124 447.6 359 63.8
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 9.1e-124 447.6 359 63.8
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 5.9e-123 444.9 357 63.3
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-122 443.7 342 66.4
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 5.0e-122 441.8 349 65.0
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.9e-121 439.9 351 65.0
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 3.6e-120 435.6 360 63.1
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 4.7e-120 435.3 350 64.9
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 6.1e-120 434.9 375 61.9
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 6.1e-120 434.9 334 66.5
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 1.8e-119 433.3 359 61.0
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.3e-119 433.0 356 61.8
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 5.2e-119 431.8 363 63.9
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.0e-118 429.9 350 60.3
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 2.0e-118 429.9 355 62.5
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 2.2e-117 426.4 356 62.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.1e-116 424.1 358 61.5
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.1e-116 424.1 360 61.4
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.6e-115 420.2 357 60.2
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 2.0e-115 419.9 356 59.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 3.5e-115 419.1 361 61.2
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.0e-114 417.5 359 59.3
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.3e-114 417.2 354 59.3
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-114 416.8 356 62.1
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.7e-114 416.8 358 61.2
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 2.2e-114 416.4 358 59.8
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.9e-113 413.3 359 59.6
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.5e-113 412.9 364 61.3
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 4.2e-113 412.1 347 60.8
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 5.5e-113 411.8 359 59.6
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 5.5e-113 411.8 352 60.5
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 5.5e-113 411.8 352 60.5
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 5.5e-113 411.8 359 59.6
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.2e-113 411.4 357 61.1
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 1.6e-112 410.2 349 59.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 2.1e-112 409.8 359 59.9
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.7e-112 409.5 359 59.6
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.6e-112 409.1 359 59.1
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 4.7e-112 408.7 356 58.7
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.4e-111 407.1 349 59.0
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.8e-111 406.8 359 59.1
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.8e-111 406.8 354 60.7
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 4.0e-111 405.6 350 61.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 4.0e-111 405.6 369 59.9
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 6.8e-111 404.8 368 59.2
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.2e-110 404.1 359 59.3
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.2e-110 404.1 357 58.8
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 2.6e-110 402.9 351 60.1
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 3.4e-110 402.5 350 59.4
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 5.7e-110 401.7 352 59.1
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 5.7e-110 401.7 352 59.1
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 5.7e-110 401.7 364 58.0
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 2.8e-109 399.4 351 59.8
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 3.7e-109 399.1 359 58.2
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 9.1e-108 394.4 334 60.8
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.6e-107 393.7 355 58.9
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 4.5e-107 392.1 368 58.4
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 2.9e-106 389.4 350 55.7
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.1e-105 387.5 372 54.3
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.1e-105 387.5 334 59.3
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.2e-104 384.0 355 54.9
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 2.1e-104 383.3 355 56.9
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 6.1e-104 381.7 371 58.2
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.3e-101 374.0 344 57.3
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 2.2e-101 373.2 335 58.8
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 6.3e-101 371.7 335 58.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 2.7e-99 366.3 362 57.2
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 3.5e-99 365.9 335 58.5
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.7e-98 363.6 351 57.8
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 4.7e-96 355.5 360 53.1
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.6e-91 339.0 246 68.3
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.9e-90 335.9 242 68.2
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.1e-87 327.8 330 52.4
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 8.6e-82 308.1 344 48.5
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 5.8e-78 295.4 348 48.3
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.6e-72 277.3 163 77.3
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 2.1e-72 276.9 279 53.4
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.2e-70 271.2 351 43.6
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 5.8e-70 268.9 237 59.1
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.4e-63 247.7 372 39.8
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 7.8e-59 231.9 232 52.6
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 7.3e-57 225.3 323 43.0
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-56 224.6 211 58.8
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.3e-56 224.6 213 54.5
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.9e-54 214.9 204 59.3
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 3.2e-52 209.9 146 71.9
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.2e-52 209.5 211 55.0
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.2e-51 208.0 206 57.3
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 2.8e-48 196.8 209 53.6
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.0e-47 191.8 122 74.6
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 8.4e-45 185.3 378 31.7
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 3.2e-44 183.3 143 60.1
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 1.6e-43 181.0 237 46.4
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.8e-34 151.0 167 45.5
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-30 137.9 211 44.1
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-24 118.2 66 83.3
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-22 111.3 66 77.3
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-18 98.6 66 74.2
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 1.3e-13 81.6 123 43.1
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 2.5e-12 77.4 52 65.4
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 9.4e-12 75.5 156 32.1
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.2e-11 75.1 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.2e-11 75.1 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.2e-11 75.1 53 66.0
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 4.7e-11 73.2 52 65.4
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 6.1e-11 72.8 51 64.7
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 5.3e-07 59.7 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 5.3e-07 59.7 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 5.3e-07 59.7 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 5.3e-07 59.7 49 59.2


User provided reference genes

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