Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.1e-73 280.0 152 100.0
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 5.3e-73 277.7 152 99.3
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 6.9e-73 277.3 152 98.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 6.5e-63 244.2 152 86.2
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 9.3e-62 240.4 152 85.5
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 9.3e-62 240.4 152 85.5
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 2.6e-40 169.1 129 78.3
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 4.2e-38 161.8 127 70.9
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.1e-37 159.5 122 71.3
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 2.7e-37 159.1 149 62.4
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.4e-36 156.8 150 59.3
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.8e-36 156.4 155 59.4
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.3e-36 156.0 152 60.5
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 4.0e-36 155.2 152 61.8
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 3.3e-35 152.1 153 58.8
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.4e-35 151.8 150 58.7
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.7e-34 149.8 149 59.1
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.4e-33 146.7 154 57.8
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 2.4e-33 146.0 150 61.3
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 4.1e-33 145.2 153 61.4
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 3.5e-32 142.1 153 58.2
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 7.7e-32 141.0 153 57.5
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 7.7e-32 141.0 147 57.8
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 1.7e-31 139.8 118 69.5
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 8.5e-31 137.5 154 61.7
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.9e-30 136.3 153 56.2
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 9.4e-30 134.0 121 64.5
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 1.2e-29 133.7 145 54.5
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 1.2e-29 133.7 145 54.5
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.2e-29 133.7 148 55.4
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.2e-29 133.7 122 63.9
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.6e-29 133.3 152 57.2
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 2.1e-29 132.9 122 63.1
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 3.6e-29 132.1 145 54.5
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 3.6e-29 132.1 145 54.5
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 4.7e-29 131.7 143 59.4
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 8.0e-29 131.0 121 58.7
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 8.0e-29 131.0 150 57.3
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 8.0e-29 131.0 127 60.6
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.4e-28 130.2 145 55.2
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.4e-28 130.2 145 55.2
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 1.8e-28 129.8 146 56.2
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 2.3e-28 129.4 158 55.7
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 2.3e-28 129.4 151 57.6
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 3.0e-28 129.0 154 56.5
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.0e-28 129.0 146 57.5
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 4.0e-28 128.6 152 56.6
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 5.2e-28 128.3 150 55.3
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 6.8e-28 127.9 148 54.1
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 6.8e-28 127.9 145 54.5
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 6.8e-28 127.9 131 58.8
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 6.8e-28 127.9 146 55.5
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 8.8e-28 127.5 149 53.0
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 8.8e-28 127.5 133 58.6
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 8.8e-28 127.5 151 58.3
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 8.8e-28 127.5 153 54.2
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.2e-27 127.1 149 53.7
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.5e-27 126.7 151 57.6
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.5e-27 126.7 150 54.7
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.5e-27 126.7 124 60.5
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.0e-27 126.3 149 55.7
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 2.6e-27 125.9 146 56.2
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 2.6e-27 125.9 146 56.2
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.6e-27 125.9 145 56.6
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 2.6e-27 125.9 149 55.0
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 3.4e-27 125.6 152 56.6
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 4.4e-27 125.2 151 56.3
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.4e-27 125.2 152 54.6
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 5.7e-27 124.8 146 56.8
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 5.7e-27 124.8 124 62.1
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 5.7e-27 124.8 111 64.9
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 9.8e-27 124.0 124 62.1
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.3e-26 123.6 148 55.4
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.3e-26 123.6 141 57.4
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-26 123.6 153 54.2
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.3e-26 123.6 153 54.2
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.3e-26 123.6 122 61.5
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.8e-26 122.5 121 61.2
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 2.8e-26 122.5 152 55.9
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 2.8e-26 122.5 152 56.6
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 4.8e-26 121.7 149 55.0
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 4.8e-26 121.7 121 60.3
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 6.3e-26 121.3 132 56.8
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 6.3e-26 121.3 132 56.8
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 6.3e-26 121.3 118 61.0
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 8.3e-26 120.9 133 56.4
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.3e-26 120.9 110 65.5
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 1.1e-25 120.6 151 53.0
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.1e-25 120.6 149 54.4
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 1.4e-25 120.2 152 55.9
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.4e-25 120.2 144 56.2
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.8e-25 119.8 147 53.7
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.8e-25 119.8 147 55.8
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 5.4e-25 118.2 148 53.4
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 9.1e-25 117.5 77 81.8
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 9.1e-25 117.5 80 75.0
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.6e-24 116.7 147 50.3
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.7e-24 115.9 100 64.0
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 3.5e-24 115.5 145 53.8
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 4.5e-24 115.2 145 54.5
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 4.5e-24 115.2 114 62.3
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.3e-23 113.6 102 63.7
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.5e-22 110.2 126 54.8
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.2e-21 107.1 127 52.8
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.6e-21 106.7 148 52.0
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.8e-20 103.2 90 63.3
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 4.0e-20 102.1 87 64.4
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 1.2e-19 100.5 117 56.4
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.2e-19 100.5 66 80.3
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.2e-19 100.5 66 80.3
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 2.6e-19 99.4 224 38.4
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 3.4e-19 99.0 145 45.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 5.4e-17 91.7 67 70.1
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 7.0e-17 91.3 85 60.0
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.0e-16 89.7 92 58.7
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.0e-16 89.7 121 47.9
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 1.9e-14 83.2 129 47.3
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 5.6e-14 81.6 110 50.0
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.4e-12 77.0 61 67.2
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.4e-12 77.0 72 58.3
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.9e-10 69.3 111 46.8
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 8.3e-10 67.8 68 60.3
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.0e-07 60.8 83 47.0
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.3e-06 55.8 47 72.3
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 5.6e-06 55.1 61 45.9


User provided reference genes

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