Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011188 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.5e-75 285.4 148 100.0
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.0e-49 198.7 148 75.7
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 2.0e-48 196.1 166 69.9
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 9.1e-46 187.2 155 70.3
Sopen07g001820 Solanum pennellii HOM05D003426 ORTHO05D003816 8.9e-33 144.1 109 78.0
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.4e-30 136.7 169 54.4
CAN.G930.15 Capsicum annuum HOM05D003426 ORTHO05D003816 6.0e-21 104.8 122 55.7
Solyc07g005710.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.3e-20 102.8 90 67.8
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 6.6e-20 101.3 98 63.3
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.7e-15 86.7 149 38.9
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.2e-15 86.3 149 39.6
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 9.2e-14 80.9 173 40.5
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 2.7e-13 79.3 162 37.7
Nitab4.5_0005869g0090 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.5e-13 79.0 171 39.8
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.0e-12 77.4 114 43.9
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.1e-12 75.1 117 43.6
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 2.5e-11 72.8 152 39.5
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 6.2e-10 68.2 133 39.1
Nitab4.5_0007354g0010 Nicotiana tabacum HOM05D003426 ORTHO05D003816 8.1e-10 67.8 75 54.7
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.4e-09 66.2 125 41.6
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 5.2e-09 65.1 82 50.0
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 5.2e-09 65.1 130 36.2
GSVIVG01023627001 Vitis vinifera HOM05D003426 ORTHO05D003816 5.2e-09 65.1 122 41.8
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 8.9e-09 64.3 140 37.9
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 8.9e-09 64.3 104 45.2
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 2.6e-08 62.8 86 50.0
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 2.6e-08 62.8 108 38.9
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 3.4e-08 62.4 116 44.0
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 3.4e-08 62.4 130 39.2
QL02p093534 Quercus lobata HOM05D003426 ORTHO05D003816 5.8e-08 61.6 127 41.7
CAN.G930.16 Capsicum annuum HOM05D003426 ORTHO05D043420 7.6e-08 61.2 69 53.6
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 9.9e-08 60.8 180 34.4
Actinidia01424 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.9e-07 59.3 129 39.5
QL02p093555 Quercus lobata HOM05D003426 ORTHO05D003816 2.9e-07 59.3 127 41.7
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 6.4e-07 58.2 155 32.3
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 6.4e-07 58.2 128 39.8
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 8.4e-07 57.8 53 62.3
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.1e-06 57.4 96 41.7
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 1.9e-06 56.6 160 32.5
Lsat_1_v5_gn_5_90221 Lactuca sativa HOM05D029854 ORTHO05D003816 1.9e-06 56.6 114 43.9
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 1.9e-06 56.6 121 34.7
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.4e-06 56.2 113 38.9
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.4e-06 56.2 122 39.3
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 4.2e-06 55.5 87 43.7
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 9.2e-06 54.3 91 49.5


User provided reference genes

Program Settings