Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011185 Solanum tuberosum HOM05D015613 ORTHO05D011265 2.4e-39 164.9 73 100.0
Peaxi162Scf00069g00313 Petunia axillaris HOM05D015613 ORTHO05D011265 1.8e-26 122.1 71 74.6
Solyc07g009230.3 Solanum lycopersicum HOM05D015613 ORTHO05D011265 1.6e-19 99.0 69 65.2
PGSC0003DMG400024205 Solanum tuberosum HOM05D015613 ORTHO05D011265 1.6e-19 99.0 69 65.2
Sopen07g017220 Solanum pennellii HOM05D015613 ORTHO05D011265 2.8e-19 98.2 69 63.8
Nitab4.5_0003623g0010 Nicotiana tabacum HOM05D015613 ORTHO05D011265 7.5e-17 90.1 52 71.2
Cc00_g34420 Coffea canephora HOM05D025805 ORTHO05D011265 7.8e-14 80.1 76 53.9
Cc06_g22590 Coffea canephora HOM05D025805 ORTHO05D011265 7.5e-09 63.5 76 39.5
Ciclev10029712m.g Citrus clementina HOM05D002484 ORTHO05D002541 1.7e-08 62.4 79 45.6
Ciclev10029828m.g Citrus clementina HOM05D002484 ORTHO05D002541 1.7e-08 62.4 79 45.6
Peaxi162Scf00324g00716 Petunia axillaris HOM05D002484 ORTHO05D002541 1.7e-08 62.4 75 44.0
Solyc07g009030.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 2.2e-08 62.0 85 44.7
Cc06_g22580 Coffea canephora HOM05D025805 ORTHO05D011265 3.7e-08 61.2 80 38.8
Solyc07g009020.2 Solanum lycopersicum HOM05D010303 ORTHO05D011265 3.7e-08 61.2 85 44.7
Solyc07g009040.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 3.7e-08 61.2 85 44.7
Solyc07g009260.3 Solanum lycopersicum HOM05D002484 ORTHO05D002541 3.7e-08 61.2 70 42.9
Cc00_g24240 Coffea canephora HOM05D025805 ORTHO05D011265 4.9e-08 60.8 75 37.3
Peaxi162Scf00324g00715 Petunia axillaris HOM05D002484 ORTHO05D002541 4.9e-08 60.8 78 42.3
Solyc07g009080.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 4.9e-08 60.8 85 44.7
Sopen07g005010 Solanum pennellii HOM05D010303 ORTHO05D011265 4.9e-08 60.8 85 44.7
Sopen07g005040 Solanum pennellii HOM05D010303 ORTHO05D011265 4.9e-08 60.8 85 44.7
Peaxi162Scf00324g00722 Petunia axillaris HOM05D002484 ORTHO05D002541 8.3e-08 60.1 77 40.3
Sopen07g004990 Solanum pennellii HOM05D010303 ORTHO05D011265 8.3e-08 60.1 85 44.7
CAN.G1126.34 Capsicum annuum HOM05D002484 ORTHO05D002541 1.4e-07 59.3 70 42.9
Sopen07g005030 Solanum pennellii HOM05D010303 ORTHO05D011265 1.4e-07 59.3 85 43.5
Solyc07g009070.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.9e-07 58.9 85 43.5
Sopen07g005050 Solanum pennellii HOM05D010303 ORTHO05D011265 2.4e-07 58.5 85 43.5
PGSC0003DMG400028755 Solanum tuberosum HOM05D010303 ORTHO05D011265 2.4e-07 58.5 85 43.5
Solyc07g005630.3 Solanum lycopersicum HOM05D015613 ORTHO05D011265 7.0e-07 57.0 80 45.0
Solyc07g009090.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 7.0e-07 57.0 85 42.4
Solyc07g009100.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 7.0e-07 57.0 85 42.4
Peaxi162Scf00324g00717 Petunia axillaris HOM05D002484 ORTHO05D002541 1.2e-06 56.2 59 47.5
Solyc07g009060.4 Solanum lycopersicum HOM05D010303 ORTHO05D011265 1.6e-06 55.8 85 42.4
CAN.G715.4 Capsicum annuum HOM05D010303 ORTHO05D011265 2.0e-06 55.5 85 40.0
Nitab4.5_0002537g0050 Nicotiana tabacum HOM05D024896 ORTHO05D011265 2.0e-06 55.5 62 48.4
Ciclev10029711m.g Citrus clementina HOM05D002484 ORTHO05D002541 2.7e-06 55.1 79 40.5
Peaxi162Scf00003g00812 Petunia axillaris HOM05D010303 ORTHO05D011265 2.7e-06 55.1 87 41.4
Solyc07g009050.3 Solanum lycopersicum HOM05D010303 ORTHO05D011265 2.7e-06 55.1 85 43.5
Oeu005138.1 Olea europaea HOM05D015613 ORTHO05D011265 3.5e-06 54.7 78 41.0


User provided reference genes

Program Settings