Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 4.1e-72 274.6 140 100.0
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 1.4e-64 249.6 131 96.2
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 6.2e-44 181.0 120 81.7
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 4.9e-33 144.8 125 60.0
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 3.2e-32 142.1 143 56.6
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 5.4e-32 141.4 138 55.8
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 5.4e-32 141.4 120 61.7
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 7.1e-32 141.0 111 64.9
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.6e-31 139.8 133 57.9
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 2.1e-31 139.4 126 61.9
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 2.1e-31 139.4 90 72.2
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.7e-31 139.0 83 77.1
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 3.5e-31 138.7 89 71.9
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 3.5e-31 138.7 90 72.2
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 3.5e-31 138.7 67 95.5
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 3.5e-31 138.7 68 92.6
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 6.0e-31 137.9 117 61.5
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 7.9e-31 137.5 122 59.8
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 7.9e-31 137.5 117 61.5
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.0e-30 137.1 120 59.2
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.8e-30 136.3 127 55.1
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.8e-30 136.3 113 65.5
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.8e-30 136.3 69 88.4
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 2.3e-30 136.0 123 60.2
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 2.3e-30 136.0 121 62.0
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 3.0e-30 135.6 105 64.8
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 5.1e-30 134.8 79 81.0
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.7e-30 134.4 83 74.7
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.7e-30 134.4 116 61.2
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 8.7e-30 134.0 124 56.5
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 8.7e-30 134.0 75 80.0
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 8.7e-30 134.0 119 58.0
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.5e-29 133.3 77 80.5
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.5e-29 133.3 116 61.2
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 2.5e-29 132.5 77 77.9
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 3.3e-29 132.1 77 80.5
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 3.3e-29 132.1 130 56.9
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 4.3e-29 131.7 96 65.6
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 4.3e-29 131.7 73 80.8
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 7.4e-29 131.0 91 65.9
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 9.6e-29 130.6 67 85.1
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 9.6e-29 130.6 109 62.4
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 2.1e-28 129.4 94 66.0
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 2.1e-28 129.4 75 78.7
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.1e-28 129.4 102 62.7
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 2.8e-28 129.0 129 55.8
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 4.8e-28 128.3 75 77.3
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 4.8e-28 128.3 131 54.2
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 6.2e-28 127.9 81 72.8
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 8.1e-28 127.5 134 54.5
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 1.1e-27 127.1 74 77.0
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.1e-27 127.1 133 55.6
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.1e-27 127.1 73 75.3
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 1.4e-27 126.7 103 61.2
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 1.4e-27 126.7 98 63.3
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 1.4e-27 126.7 101 63.4
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 1.8e-27 126.3 96 61.5
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.8e-27 126.3 69 78.3
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 2.4e-27 125.9 73 75.3
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 2.4e-27 125.9 73 75.3
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 3.1e-27 125.6 68 80.9
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 3.1e-27 125.6 120 57.5
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 4.0e-27 125.2 118 55.1
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 5.3e-27 124.8 104 59.6
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 5.3e-27 124.8 131 55.7
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 5.3e-27 124.8 68 79.4
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 6.9e-27 124.4 131 51.9
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 6.9e-27 124.4 68 82.4
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 9.0e-27 124.0 124 51.6
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 9.0e-27 124.0 134 49.3
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.5e-26 123.2 111 61.3
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.5e-26 123.2 124 54.0
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.5e-26 123.2 73 74.0
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 1.5e-26 123.2 92 63.0
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.5e-26 123.2 93 62.4
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 2.0e-26 122.9 131 51.1
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 2.6e-26 122.5 73 76.7
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 2.6e-26 122.5 122 54.1
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 3.4e-26 122.1 121 53.7
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 4.5e-26 121.7 134 53.0
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 7.6e-26 120.9 162 46.9
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 1.3e-25 120.2 54 100.0
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 3.8e-25 118.6 73 69.9
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 5.5e-24 114.8 54 90.7
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 7.1e-24 114.4 108 52.8
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 1.2e-23 113.6 128 53.1
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.2e-23 113.6 129 51.2
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 7.9e-23 110.9 54 85.2
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 5.1e-22 108.2 68 67.6
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 8.7e-22 107.5 81 63.0
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 2.1e-20 102.8 69 66.7
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 9.0e-19 97.4 62 64.5
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 9.0e-19 97.4 48 85.4
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.2e-18 97.1 47 87.2
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.5e-18 96.7 47 85.1
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 4.5e-18 95.1 43 93.0
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 9.3e-16 87.4 100 48.0
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 5.1e-14 81.6 53 67.9
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 2.5e-13 79.3 57 50.9
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 2.5e-13 79.3 57 59.6
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 2.7e-07 59.3 37 64.9
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 8.7e-06 54.3 49 51.0


User provided reference genes

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