Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400011009 Solanum tuberosum HOM05D007791 ORTHO05D028502 9.3e-43 176.4 85 100.0
Sopen10g034330 Solanum pennellii HOM05D007791 ORTHO05D028502 7.3e-40 166.8 85 94.1
CAN.G324.21 Capsicum annuum HOM05D007791 ORTHO05D028502 2.7e-34 148.3 85 80.0
Hma1.2p1_0766F.1_g215310 Hydrangea macrophylla HOM05D007791 ORTHO05D028502 3.7e-15 84.7 64 62.5
Migut.J00302 Erythranthe guttata HOM05D007791 ORTHO05D000653 6.1e-10 67.4 64 45.3
Ciclev10013177m.g Citrus clementina HOM05D007791 ORTHO05D000653 6.7e-09 63.9 69 46.4
Dinv37146 Davidia involucrata HOM05D007791 ORTHO05D000653 6.7e-09 63.9 74 40.5
Cc04_g14510 Coffea canephora HOM05D007791 ORTHO05D000653 1.1e-08 63.2 64 48.4
Ciclev10022906m.g Citrus clementina HOM05D001004 ORTHO05D000653 2.5e-08 62.0 78 46.2
ClCG07G000770 Citrullus lanatus HOM05D001004 ORTHO05D000653 4.3e-08 61.2 63 46.0
Potri.006G088700 Populus trichocarpa HOM05D007791 ORTHO05D000653 5.7e-08 60.8 69 43.5
Rhsim05G0195200 Rhododendron simsii HOM05D007791 ORTHO05D000653 5.7e-08 60.8 71 45.1
Manes.09G094800 Manihot esculenta HOM05D007791 ORTHO05D000653 1.3e-07 59.7 63 46.0
CSS0008915 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 1.7e-07 59.3 63 44.4
CBR_g37573 Chara braunii HOM05D007791 ORTHO05D000653 1.7e-07 59.3 70 45.7
Medtr3g020800 Medicago truncatula HOM05D007791 ORTHO05D000653 1.7e-07 59.3 74 40.5
Potri.006G088500 Populus trichocarpa HOM05D007791 ORTHO05D000653 1.7e-07 59.3 69 42.0
Potri.006G088616 Populus trichocarpa HOM05D007791 ORTHO05D000653 1.7e-07 59.3 69 42.0
CSS0023434 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 2.2e-07 58.9 63 44.4
CSS0036268 Camellia sinensis var. sinensis HOM05D007791 ORTHO05D000653 2.2e-07 58.9 63 44.4
Glyma.11G151000 Glycine max HOM05D007791 ORTHO05D000653 2.2e-07 58.9 69 40.6
Sed0020724 Sechium edule HOM05D001004 ORTHO05D000653 2.2e-07 58.9 61 50.8
PGR031G1849 Punica granatum HOM05D007791 ORTHO05D000653 2.8e-07 58.5 69 43.5
CsaV3_4G025200 Cucumis sativus L. HOM05D007791 ORTHO05D000653 4.8e-07 57.8 88 38.6
DCAR_010421 Daucus carota HOM05D007791 ORTHO05D000653 4.8e-07 57.8 64 42.2
Rhsim05G0195100 Rhododendron simsii HOM05D007791 ORTHO05D000653 4.8e-07 57.8 67 47.8
Ciclev10022909m.g Citrus clementina HOM05D001004 ORTHO05D000653 6.3e-07 57.4 78 43.6
Peaxi162Scf00013g00738 Petunia axillaris HOM05D007791 ORTHO05D000653 6.3e-07 57.4 64 46.9
Potri.006G088664 Populus trichocarpa HOM05D007791 ORTHO05D000653 6.3e-07 57.4 69 42.0
DCAR_018459 Daucus carota HOM05D000077 ORTHO05D000552 1.1e-06 56.6 63 42.9
Phvul.005G032000 Phaseolus vulgaris HOM05D007791 ORTHO05D000653 1.1e-06 56.6 69 40.6
ClCG07G000780 Citrullus lanatus HOM05D007791 ORTHO05D044567 1.4e-06 56.2 66 47.0
Duzib106G0108 Durio zibethinus HOM05D007791 ORTHO05D000653 1.4e-06 56.2 62 43.5
Nitab4.5_0007505g0010 Nicotiana tabacum HOM05D002101 ORTHO05D002126 1.4e-06 56.2 78 39.7
arahy.Tifrunner.gnm1.ann1.0A2T8K Arachis hypogaea HOM05D007791 ORTHO05D000653 1.8e-06 55.8 83 39.8
Medtr3g020970 Medicago truncatula HOM05D007791 ORTHO05D000653 1.8e-06 55.8 69 40.6
Nitab4.5_0002449g0040 Nicotiana tabacum HOM05D002101 ORTHO05D002126 1.8e-06 55.8 63 47.6
Rhsim05G0195400 Rhododendron simsii HOM05D007791 ORTHO05D000653 1.8e-06 55.8 71 45.1
Sed0018468 Sechium edule HOM05D001004 ORTHO05D000653 1.8e-06 55.8 64 43.8
TPR.G35313 Trifolium pratense HOM05D007791 ORTHO05D000653 1.8e-06 55.8 69 39.1
HPP92_019238 Vanilla planifolia HOM05D007791 ORTHO05D000653 1.8e-06 55.8 64 42.2
Gohir.A04G084100 Gossypium hirsutum HOM05D007791 ORTHO05D000653 2.4e-06 55.5 62 41.9
Gohir.D04G122900 Gossypium hirsutum HOM05D007791 ORTHO05D000653 2.4e-06 55.5 62 41.9
Manes.05G086480 Manihot esculenta HOM05D001004 ORTHO05D000653 2.4e-06 55.5 69 42.0
SEGI_12735 Sequoiadendron giganteum HOM05D007791 ORTHO05D000653 2.4e-06 55.5 82 41.5
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 3.1e-06 55.1 63 44.4
COL.COLO4_14751 Corchorus olitorius HOM05D007791 ORTHO05D000653 3.1e-06 55.1 62 41.9
Duzib106G0736 Durio zibethinus HOM05D007791 ORTHO05D000653 3.1e-06 55.1 62 40.3
Gorai.012G105800 Gossypium raimondii HOM05D007791 ORTHO05D000653 3.1e-06 55.1 62 41.9
TPR.G3886 Trifolium pratense HOM05D007791 ORTHO05D000653 3.1e-06 55.1 69 39.1
GSVIVG01034125001 Vitis vinifera HOM05D007791 ORTHO05D000653 4.1e-06 54.7 69 42.0
arahy.Tifrunner.gnm1.ann1.NKRP5F Arachis hypogaea HOM05D007791 ORTHO05D000653 5.3e-06 54.3 83 39.8
Potri.005G221000 Populus trichocarpa HOM05D001004 ORTHO05D000653 5.3e-06 54.3 67 38.8
Atru.chr8.2017 Acer truncatum HOM05D007791 ORTHO05D000653 6.9e-06 53.9 69 37.7
Atru.chr8.2026 Acer truncatum HOM05D007791 ORTHO05D000653 6.9e-06 53.9 69 37.7
Haze_24569 Corylus avellana HOM05D001004 ORTHO05D000653 9.1e-06 53.5 68 39.7
Manes.05G086329 Manihot esculenta HOM05D001004 ORTHO05D000653 9.1e-06 53.5 69 40.6
Solyc06g069400.4 Solanum lycopersicum HOM05D002101 ORTHO05D002126 9.1e-06 53.5 63 42.9
PGSC0003DMG400004064 Solanum tuberosum HOM05D007791 ORTHO05D000653 9.1e-06 53.5 63 42.9
HPP92_012980 Vanilla planifolia HOM05D007791 ORTHO05D000653 9.1e-06 53.5 70 40.0


User provided reference genes

Program Settings