Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010936 Solanum tuberosum HOM05D002441 ORTHO05D002376 2.5e-84 315.5 163 100.0
PGSC0003DMG400010868 Solanum tuberosum HOM05D002441 ORTHO05D002376 1.0e-69 266.9 146 93.2
PGSC0003DMG400040698 Solanum tuberosum HOM05D002441 ORTHO05D002376 4.5e-54 214.9 146 78.8
CAN.G125.10 Capsicum annuum HOM05D000010 ORTHO05D002376 4.4e-33 145.2 147 51.0
PGSC0003DMG400007030 Solanum tuberosum HOM05D002441 ORTHO05D002513 1.4e-31 140.2 128 55.5
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.5e-30 135.2 173 46.2
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.3e-29 132.9 154 48.7
CAN.G411.8 Capsicum annuum HOM05D002441 ORTHO05D002376 2.5e-28 129.4 99 54.5
Nitab4.5_0004100g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.3e-28 129.0 137 51.1
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.2e-28 127.9 173 45.1
CAN.G1139.20 Capsicum annuum HOM05D002441 ORTHO05D002376 1.6e-27 126.7 128 50.8
Nitab4.5_0003378g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.1e-27 126.3 153 47.1
CAN.G651.11 Capsicum annuum HOM05D002441 ORTHO05D002376 4.7e-27 125.2 90 57.8
CAN.G206.110 Capsicum annuum HOM05D002441 ORTHO05D002376 2.3e-26 122.9 90 58.9
Nitab4.5_0005910g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.9e-26 120.9 111 51.4
CAN.G426.17 Capsicum annuum HOM05D002441 ORTHO05D002376 5.7e-25 118.2 96 54.2
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 6.3e-24 114.8 89 56.2
Nitab4.5_0002025g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-23 114.0 108 52.8
Nitab4.5_0000448g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.4e-23 112.8 101 53.5
Nitab4.5_0003964g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.1e-23 112.1 101 53.5
PGSC0003DMG401018748 Solanum tuberosum HOM05D002441 ORTHO05D002376 9.2e-23 110.9 109 56.0
Nitab4.5_0007294g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.0e-21 105.1 88 55.7
Nitab4.5_0007040g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.6e-20 101.7 114 48.2
Nitab4.5_0000167g0330 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.1e-19 99.8 154 39.0
Nitab4.5_0003355g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.8e-19 99.4 172 37.8
Nitab4.5_0002391g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.7e-19 98.6 88 52.3
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-18 97.1 145 37.2
CAN.G1181.26 Capsicum annuum HOM05D002441 ORTHO05D002376 8.9e-18 94.4 147 38.1
Nitab4.5_0003263g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.8e-17 91.7 142 40.8
Nitab4.5_0026131g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-16 89.7 112 40.2
CAN.G1212.9 Capsicum annuum HOM05D002441 ORTHO05D002376 2.9e-16 89.4 122 36.9
Nitab4.5_0000928g0130 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.9e-16 89.4 125 40.8
Peaxi162Scf00706g00120 Petunia axillaris HOM05D002441 ORTHO05D002376 4.9e-16 88.6 113 40.7
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 6.4e-16 88.2 117 40.2
Nitab4.5_0002544g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.4e-16 88.2 108 40.7
Peaxi162Scf00429g00624 Petunia axillaris HOM05D002441 ORTHO05D002376 6.4e-16 88.2 116 38.8
Nitab4.5_0001818g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-15 87.0 115 40.0
Peaxi162Scf00347g00918 Petunia axillaris HOM05D002441 ORTHO05D002376 1.9e-15 86.7 165 32.7
Nitab4.5_0001070g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.2e-15 85.9 86 50.0
Nitab4.5_0011018g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.2e-15 85.9 112 40.2
Nitab4.5_0005864g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.1e-15 85.5 170 34.1
Nitab4.5_0015899g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.0e-15 84.7 90 42.2
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.2e-15 84.3 69 56.5
Peaxi162Scf00103g00815 Petunia axillaris HOM05D002441 ORTHO05D002376 9.2e-15 84.3 162 34.0
Nitab4.5_0002907g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.2e-14 84.0 112 37.5
Nitab4.5_0004197g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.6e-14 83.6 112 39.3
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 1.6e-14 83.6 99 41.4
Peaxi162Scf00385g00619 Petunia axillaris HOM05D002441 ORTHO05D002376 4.6e-14 82.0 103 38.8
Nitab4.5_0009530g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.0e-14 81.6 88 45.5
Peaxi162Scf00261g00059 Petunia axillaris HOM05D002441 ORTHO05D002376 7.8e-14 81.3 113 36.3
Nitab4.5_0000020g0400 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.3e-13 80.5 145 34.5
CAN.G1537.11 Capsicum annuum HOM05D002441 ORTHO05D002376 1.7e-13 80.1 110 36.4
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 3.0e-13 79.3 166 33.7
Nitab4.5_0001878g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.0e-13 79.3 90 44.4
Peaxi162Scf00602g00313 Petunia axillaris HOM05D002441 ORTHO05D002376 5.0e-13 78.6 165 31.5
CAN.G358.51 Capsicum annuum HOM05D002441 ORTHO05D002376 6.6e-13 78.2 164 33.5
Peaxi162Scf00832g00024 Petunia axillaris HOM05D002441 ORTHO05D002376 8.6e-13 77.8 134 33.6
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-12 77.4 97 39.2
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-12 77.0 132 34.1
Nitab4.5_0014949g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.5e-12 76.3 87 42.5
Peaxi162Scf00588g00038 Petunia axillaris HOM05D002441 ORTHO05D002376 2.5e-12 76.3 98 38.8
Nitab4.5_0002735g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.3e-12 75.9 87 42.5
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 7.3e-12 74.7 161 29.8
Peaxi162Scf00774g00217 Petunia axillaris HOM05D002441 ORTHO05D002376 7.3e-12 74.7 134 32.8
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 1.6e-11 73.6 96 41.7
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.6e-11 72.4 166 34.3
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.6e-11 72.4 166 34.3
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.7e-11 72.0 166 34.3
Nitab4.5_0000187g0280 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.2e-11 71.6 99 38.4
Nitab4.5_0002175g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.2e-11 71.6 112 35.7
CAN.G505.25 Capsicum annuum HOM05D002441 ORTHO05D002376 8.0e-11 71.2 128 32.0
CAN.G220.26 Capsicum annuum HOM05D002891 ORTHO05D002376 1.1e-10 70.9 148 31.8
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.4e-10 70.5 103 38.8
CAN.G849.8 Capsicum annuum HOM05D002441 ORTHO05D002376 1.4e-10 70.5 151 29.1
Nitab4.5_0008258g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-10 70.5 94 41.5
Nitab4.5_0000365g0120 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.3e-10 69.7 144 36.1
Nitab4.5_0010449g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.3e-10 69.7 80 41.2
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.8J8DAZ Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 103 38.8
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.G9S7AV Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-10 69.3 83 41.0
Nitab4.5_0001960g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.1e-10 69.3 73 47.9
arahy.Tifrunner.gnm1.ann1.D5SYT8 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-10 68.9 85 37.6
arahy.Tifrunner.gnm1.ann1.D8EMDP Arachis hypogaea HOM05D002441 ORTHO05D002376 4.0e-10 68.9 147 27.2
Nitab4.5_0026297g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.8e-10 68.2 109 36.7
Nitab4.5_0004405g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.9e-10 67.8 111 32.4
Nitab4.5_0008207g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.9e-10 67.8 86 38.4
arahy.Tifrunner.gnm1.ann1.18WZIV Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-09 67.0 100 38.0
Nitab4.5_0000681g0200 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.0e-09 66.6 72 44.4
HanXRQChr17g0567981 Helianthus annuus HOM05D003964 ORTHO05D000174 4.4e-09 65.5 127 33.9
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 5.8e-09 65.1 76 44.7
arahy.Tifrunner.gnm1.ann1.VXHT09 Arachis hypogaea HOM05D002689 ORTHO05D002376 5.8e-09 65.1 81 37.0
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.8e-09 65.1 111 31.5
arahy.Tifrunner.gnm1.ann1.FH4NXK Arachis hypogaea HOM05D002441 ORTHO05D002376 7.5e-09 64.7 84 33.3
Nitab4.5_0009190g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.5e-09 64.7 109 33.9
CAN.G681.71 Capsicum annuum HOM05D002441 ORTHO05D002376 9.8e-09 64.3 70 38.6
arahy.Tifrunner.gnm1.ann1.BSJS1T Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-08 63.9 80 36.2
arahy.Tifrunner.gnm1.ann1.M437Z4 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.7e-08 63.5 83 36.1
Nitab4.5_0000090g0120 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-08 63.5 101 34.7
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 2.2e-08 63.2 100 35.0
Nitab4.5_0000216g0290 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.9e-08 62.8 69 43.5
arahy.Tifrunner.gnm1.ann1.K3U0KS Arachis hypogaea HOM05D002441 ORTHO05D002376 3.7e-08 62.4 81 34.6
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 4.9e-08 62.0 80 36.2
Nitab4.5_0013831g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.9e-08 62.0 132 31.8
HanXRQChr13g0387501 Helianthus annuus HOM05D003964 ORTHO05D000174 6.4e-08 61.6 83 37.3
HanXRQChr05g0160951 Helianthus annuus HOM05D003964 ORTHO05D000174 8.3e-08 61.2 127 33.1
Nitab4.5_0000070g0310 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.3e-08 61.2 77 39.0
arahy.Tifrunner.gnm1.ann1.33R3MR Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-07 60.8 84 35.7
HanXRQChr08g0219171 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-07 60.8 147 29.9
Peaxi162Scf00070g00086 Petunia axillaris HOM05D002441 ORTHO05D002376 1.9e-07 60.1 125 31.2
Peaxi162Scf00156g00109 Petunia axillaris HOM05D002441 ORTHO05D002376 1.9e-07 60.1 112 33.0
arahy.Tifrunner.gnm1.ann1.0E3QWF Arachis hypogaea HOM05D002441 ORTHO05D002376 2.4e-07 59.7 99 34.3
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.4e-07 59.7 136 28.7
CAN.G694.34 Capsicum annuum HOM05D002441 ORTHO05D002376 4.1e-07 58.9 106 30.2
Thhalv10002212m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.4e-07 58.5 85 36.5
HanXRQChr09g0260311 Helianthus annuus HOM05D000353 ORTHO05D000174 5.4e-07 58.5 163 25.2
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 5.4e-07 58.5 122 31.1
CAN.G182.27 Capsicum annuum HOM05D002441 ORTHO05D002376 1.6e-06 57.0 68 35.3
CAN.G193.15 Capsicum annuum HOM05D002441 ORTHO05D002376 1.6e-06 57.0 125 31.2
HanXRQChr01g0021371 Helianthus annuus HOM05D003964 ORTHO05D000174 1.6e-06 57.0 116 32.8
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.6e-06 57.0 85 37.6
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 2.1e-06 56.6 67 41.8
arahy.Tifrunner.gnm1.ann1.HC104Q Arachis hypogaea HOM05D002441 ORTHO05D002376 2.1e-06 56.6 180 23.3
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 2.1e-06 56.6 158 28.5
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 2.1e-06 56.6 158 28.5
HanXRQChr07g0205571 Helianthus annuus HOM05D003964 ORTHO05D000174 2.7e-06 56.2 128 29.7
arahy.Tifrunner.gnm1.ann1.EPMR0G Arachis hypogaea HOM05D002441 ORTHO05D002376 3.5e-06 55.8 82 34.1
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.5e-06 55.8 85 34.1
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.5e-06 55.8 83 36.1
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.5e-06 55.8 85 34.1
CAN.G628.5 Capsicum annuum HOM05D002441 ORTHO05D002376 4.6e-06 55.5 143 28.0
HanXRQChr15g0463841 Helianthus annuus HOM05D000353 ORTHO05D000174 4.6e-06 55.5 130 30.0
Nitab4.5_0000265g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.0e-06 55.1 111 32.4


User provided reference genes

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