Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010932 Solanum tuberosum HOM05D014661 ORTHO05D018081 4.0e-93 344.7 174 100.0
PGSC0003DMG400010934 Solanum tuberosum HOM05D014661 ORTHO05D018081 1.5e-92 342.8 174 99.4
PGSC0003DMG400040083 Solanum tuberosum HOM05D014661 ORTHO05D018081 5.6e-79 297.7 175 86.9
Sopen01g022350 Solanum pennellii HOM05D014661 ORTHO05D018081 3.5e-73 278.5 172 82.0
PGSC0003DMG400010933 Solanum tuberosum HOM05D014661 ORTHO05D018081 1.2e-60 236.9 129 92.2
PGSC0003DMG400047259 Solanum tuberosum HOM05D014661 ORTHO05D018081 6.5e-51 204.5 175 61.1
PGSC0003DMG400037953 Solanum tuberosum HOM05D014661 ORTHO05D018081 4.7e-49 198.4 175 60.6
Sopen01g022890 Solanum pennellii HOM05D014661 ORTHO05D018081 1.7e-38 163.3 142 59.9
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 3.3e-18 95.9 155 31.6
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 8.0e-17 91.3 157 33.8
Solyc03g112170.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.4e-16 90.5 155 32.9
PGSC0003DMG400040957 Solanum tuberosum HOM05D014661 ORTHO05D001819 3.0e-16 89.4 164 31.1
Sopen03g031260 Solanum pennellii HOM05D003146 ORTHO05D001819 5.2e-16 88.6 155 32.3
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 2.6e-15 86.3 176 30.1
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 3.7e-14 82.4 167 29.3
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 4.9e-14 82.0 177 31.1
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.0e-11 74.3 122 35.2
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 1.3e-11 73.9 171 28.1
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 1.7e-11 73.6 176 30.1
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 6.6e-11 71.6 137 30.7
TWI14G0207 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 9.5e-10 67.8 125 30.4
TWI59G0004 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 9.5e-10 67.8 124 29.0
PSO478G2336 Papaver somniferum HOM05D001445 ORTHO05D001261 3.6e-09 65.9 174 29.3
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 6.2e-09 65.1 165 27.9
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 6.2e-09 65.1 165 27.9
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 8.0e-09 64.7 174 22.4
Nn1g00650 Nelumbo nucifera HOM05D001445 ORTHO05D001261 8.0e-09 64.7 147 33.3
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.4e-08 63.9 138 29.0
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 1.8e-08 63.5 138 27.5
DCAR_030435 Daucus carota HOM05D003146 ORTHO05D001819 1.8e-08 63.5 156 26.3
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 2.3e-08 63.2 137 21.2
Actinidia19773 Actinidia chinensis HOM05D003556 ORTHO05D003404 6.8e-08 61.6 144 24.3
Cfa006332 Carpinus fangiana HOM05D001578 ORTHO05D001207 6.8e-08 61.6 102 33.3
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 8.9e-08 61.2 176 23.3
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 8.9e-08 61.2 170 22.4
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 1.5e-07 60.5 163 27.6
Cfa006646 Carpinus fangiana HOM05D003556 ORTHO05D003404 2.0e-07 60.1 154 27.9
Cfa006647 Carpinus fangiana HOM05D003556 ORTHO05D003404 2.0e-07 60.1 154 27.9
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.0e-07 60.1 151 23.8
MD07G1088700 Malus domestica HOM05D001445 ORTHO05D001261 2.6e-07 59.7 148 27.0
Peaxi162Scf00000g59010 Petunia axillaris HOM05D014661 ORTHO05D018081 2.6e-07 59.7 83 41.0
Sed0024461 Sechium edule HOM05D003556 ORTHO05D003404 2.6e-07 59.7 124 25.8
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 2.6e-07 59.7 138 26.1
Cfa006645 Carpinus fangiana HOM05D014310 ORTHO05D003404 3.4e-07 59.3 161 28.0
Atru.chr6.1289 Acer truncatum HOM05D004113 ORTHO05D001207 4.4e-07 58.9 131 26.0
vmacro21085 Vaccinium macrocarpon HOM05D001445 ORTHO05D001261 4.4e-07 58.9 129 30.2
Potri.014G044100 Populus trichocarpa HOM05D001445 ORTHO05D001261 5.8e-07 58.5 145 26.2
CSS0020469 Camellia sinensis var. sinensis HOM05D001445 ORTHO05D001261 1.3e-06 57.4 124 27.4
vmacro21086 Vaccinium macrocarpon HOM05D001445 ORTHO05D001261 1.3e-06 57.4 138 28.3
Cfa006651 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.7e-06 57.0 155 30.3
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 1.7e-06 57.0 141 22.0
SHI15103 Sapria himalayana HOM05D003556 ORTHO05D003404 1.7e-06 57.0 137 27.0
Sed0028173 Sechium edule HOM05D003556 ORTHO05D003404 1.7e-06 57.0 134 23.1
TAR629G3049 Trochodendron aralioides HOM05D001445 ORTHO05D001261 1.7e-06 57.0 173 24.9
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 2.2e-06 56.6 121 28.1
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 2.2e-06 56.6 169 25.4
RcHm_v2.0_Chr1g0344051 Rosa chinensis HOM05D001445 ORTHO05D001261 2.9e-06 56.2 166 23.5
Actinidia28299 Actinidia chinensis HOM05D003146 ORTHO05D001819 3.7e-06 55.8 123 29.3
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 3.7e-06 55.8 156 24.4
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 3.7e-06 55.8 121 28.1
Sabra14G0032000 Salix brachista HOM05D001445 ORTHO05D001261 3.7e-06 55.8 142 25.4
Cpa.g.sc52.69 Carica papaya HOM05D001445 ORTHO05D001261 4.9e-06 55.5 125 30.4
Dinv44021 Davidia involucrata HOM05D001445 ORTHO05D001261 4.9e-06 55.5 157 26.8
MD02G1225200 Malus domestica HOM05D001445 ORTHO05D001261 4.9e-06 55.5 168 25.6
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 4.9e-06 55.5 143 28.0
PGSC0003DMG400046440 Solanum tuberosum HOM05D039580 ORTHO05D051301 4.9e-06 55.5 166 24.7
Aqoxy5G03637 Aquilegia oxysepala HOM05D001445 ORTHO05D001261 6.4e-06 55.1 153 24.8
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 6.4e-06 55.1 165 22.4
TPR.G39508 Trifolium pratense HOM05D001445 ORTHO05D001261 6.4e-06 55.1 184 27.2
Cfa014665 Carpinus fangiana HOM05D003556 ORTHO05D003404 8.3e-06 54.7 154 27.3


User provided reference genes

Program Settings