Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.4e-67 257.3 132 100.0
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 3.9e-48 194.9 111 90.1
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 3.8e-35 151.8 85 91.8
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.7e-31 137.9 98 73.5
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 8.8e-24 114.0 111 56.8
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 7.4e-23 110.9 115 53.0
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-22 109.4 118 49.2
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-22 109.4 116 50.9
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.8e-22 109.0 125 52.8
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-22 108.6 98 58.2
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-22 107.5 116 48.3
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-21 106.7 118 48.3
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 3.1e-21 105.5 115 51.3
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.9e-21 104.4 93 58.1
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-20 103.6 119 48.7
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-20 103.2 118 49.2
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.0e-20 102.8 98 55.1
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.4e-20 102.1 63 84.1
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 4.5e-20 101.7 102 54.9
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 4.5e-20 101.7 101 56.4
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.5e-20 101.7 102 53.9
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 5.9e-20 101.3 101 53.5
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.7e-20 100.9 103 52.4
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-19 99.4 107 48.6
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.0e-19 98.2 98 52.0
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.0e-19 98.2 105 49.5
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.0e-19 98.2 100 53.0
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.5e-19 97.8 99 50.5
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 1.4e-18 96.7 93 58.1
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 2.5e-18 95.9 100 54.0
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 3.2e-18 95.5 73 65.8
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-18 95.5 101 50.5
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 5.5e-18 94.7 99 51.5
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-18 94.4 100 47.0
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-17 93.6 103 50.5
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 6.1e-17 91.3 53 90.6
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.1e-17 91.3 85 49.4
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 3.0e-16 89.0 82 56.1
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 3.0e-16 89.0 111 45.0
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.9e-16 88.6 66 60.6
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 5.2e-16 88.2 98 49.0
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.7e-16 87.8 68 58.8
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-15 86.7 101 48.5
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-15 86.3 69 58.0
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-15 86.3 107 47.7
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-15 86.3 111 44.1
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.3e-15 85.5 62 61.3
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.4e-15 85.1 99 49.5
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.7e-15 84.7 100 49.0
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.7e-15 84.7 68 55.9
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.4e-15 84.3 76 52.6
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.7e-15 84.0 72 59.7
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.7e-14 83.2 61 63.9
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.2e-14 82.8 66 62.1
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 2.8e-14 82.4 72 59.7
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-14 81.6 72 51.4
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-14 80.9 68 54.4
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-13 80.5 84 48.8
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-13 80.5 64 56.2
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 1.4e-13 80.1 76 50.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.8e-13 79.7 62 59.7
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.3e-13 78.2 64 54.7
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.1e-13 77.4 80 47.5
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-12 77.0 59 59.3
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.6e-12 75.9 67 55.2
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-12 75.5 96 47.9
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 1.0e-11 73.9 78 46.2
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.7e-11 73.2 94 40.4
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-11 73.2 56 62.5
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.9e-11 72.4 80 43.8
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 8.5e-11 70.9 121 34.7
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 8.5e-11 70.9 84 42.9
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.5e-11 70.9 65 52.3
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 8.5e-11 70.9 65 52.3
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 7.2e-10 67.8 83 42.2
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-10 67.8 47 63.8
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.2e-10 67.8 84 47.6
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 9.4e-10 67.4 86 41.9
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.4e-10 67.4 52 59.6
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 1.2e-09 67.0 41 73.2
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.7e-09 65.9 88 39.8
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 4.7e-09 65.1 108 35.2
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.0e-08 63.9 86 40.7
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-08 63.9 94 40.4
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-08 62.8 49 63.3
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.0e-08 62.0 88 37.5
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 8.8e-08 60.8 74 43.2
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.8e-08 60.8 86 39.5
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 8.8e-08 60.8 86 40.7
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.2e-07 60.5 86 38.4
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-07 60.5 74 50.0
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.5e-07 60.1 74 43.2
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.0e-07 59.7 93 37.6
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-07 59.3 76 39.5
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 2.6e-07 59.3 68 41.2
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 3.3e-07 58.9 76 38.2
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 4.4e-07 58.5 76 38.2
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 4.4e-07 58.5 76 38.2
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 4.4e-07 58.5 76 38.2
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 4.4e-07 58.5 76 38.2
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 4.4e-07 58.5 87 36.8
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 5.7e-07 58.2 66 42.4
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 5.7e-07 58.2 81 37.0
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 7.5e-07 57.8 66 42.4
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 7.5e-07 57.8 76 38.2
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 7.5e-07 57.8 65 43.1
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 7.5e-07 57.8 76 38.2
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 7.5e-07 57.8 76 38.2
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 9.7e-07 57.4 63 42.9
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 9.7e-07 57.4 73 41.1
Peaxi162Scf00230g00143 Petunia axillaris HOM05D003888 ORTHO05D007163 1.3e-06 57.0 62 48.4
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-06 57.0 96 34.4
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-06 56.6 63 42.9
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-06 56.2 66 40.9
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 2.8e-06 55.8 76 36.8
Hund00757 Selenicereus undatus HOM05D009146 ORTHO05D011649 3.7e-06 55.5 69 43.5
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 4.8e-06 55.1 73 39.7
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 6.3e-06 54.7 76 36.8
Sc12g0008070 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.3e-06 54.7 83 34.9


User provided reference genes

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