Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.5e-55 218.8 128 100.0
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 3.0e-29 132.1 65 92.3
Sopen10g004930 Solanum pennellii HOM05D007556 ORTHO05D002252 6.7e-29 131.0 65 92.3
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 6.7e-21 104.4 66 78.8
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.4e-15 84.0 80 56.2
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.1e-14 82.8 82 54.9
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.7e-14 81.6 73 60.3
PGSC0003DMG400022822 Solanum tuberosum HOM05D007556 ORTHO05D002252 4.7e-14 81.6 58 70.7
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 1.2e-12 77.0 71 59.2
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.4e-12 75.1 72 58.3
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-11 72.8 73 54.8
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.8e-11 72.4 81 53.1
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 2.8e-11 72.4 72 50.0
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.8e-11 71.6 73 56.2
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 8.3e-11 70.9 74 55.4
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-10 69.3 73 54.8
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.1e-10 68.9 64 57.8
PGSC0003DMG400020028 Solanum tuberosum HOM05D007556 ORTHO05D002252 5.4e-10 68.2 63 54.0
CAN.G132.4 Capsicum annuum HOM05D007556 ORTHO05D002252 1.6e-09 66.6 52 69.2
PGSC0003DMG400009559 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.7e-09 65.9 63 52.4
PGSC0003DMG400009558 Solanum tuberosum HOM05D007556 ORTHO05D002252 1.7e-08 63.2 65 50.8
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-08 62.8 58 58.6
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.9e-08 62.4 68 51.5
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 3.8e-08 62.0 75 40.0
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.5e-07 60.1 82 42.7
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.5e-07 60.1 82 42.7
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 1.9e-07 59.7 59 55.9
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 1.9e-07 59.7 61 52.5
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 3.2e-07 58.9 75 44.0
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 4.2e-07 58.5 84 42.9
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 5.5e-07 58.2 72 43.1
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 7.2e-07 57.8 66 42.4
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 9.4e-07 57.4 74 50.0
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 9.4e-07 57.4 72 43.1
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 1.2e-06 57.0 73 39.7
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 1.6e-06 56.6 84 44.0
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.6e-06 56.6 83 39.8
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.6e-06 56.6 83 38.6
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.6e-06 56.6 83 38.6
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.6e-06 56.6 81 42.0
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.6e-06 56.6 81 42.0
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.1e-06 56.2 93 35.5
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 4.7e-06 55.1 57 49.1
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 4.7e-06 55.1 75 42.7
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 6.1e-06 54.7 44 59.1
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 6.1e-06 54.7 61 45.9


User provided reference genes

Program Settings