Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010694 Solanum tuberosum HOM05D000002 ORTHO05D004433 4.9e-60 234.2 111 100.0
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.9e-27 125.9 118 46.6
Sopen04g009300 Solanum pennellii HOM05D000004 ORTHO05D051352 1.1e-24 116.7 72 76.4
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 9.6e-24 113.6 109 53.2
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-22 109.4 109 51.4
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.4e-22 109.0 113 42.5
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-21 105.5 109 50.5
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 3.4e-21 105.1 109 49.5
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-21 104.8 109 49.5
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-21 104.4 109 50.5
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-20 103.2 109 51.4
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-20 103.2 109 48.6
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-20 102.8 109 49.5
SHI37106 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-20 102.8 109 49.5
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-20 102.4 108 49.1
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-20 102.4 109 49.5
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-20 102.1 109 48.6
COL.COLO4_30078 Corchorus olitorius HOM05D000002 ORTHO05D004433 3.8e-20 101.7 108 45.4
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-20 101.7 109 48.6
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-20 101.3 109 48.6
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 6.5e-20 100.9 109 45.0
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 1.4e-19 99.8 52 86.5
SHI12755 Sapria himalayana HOM05D000002 ORTHO05D004433 2.5e-19 99.0 108 48.1
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.1e-19 97.4 108 49.1
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 6.0e-18 94.4 109 47.7
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 1.8e-17 92.8 109 49.5
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.3e-17 92.4 111 44.1
GSVIVG01017482001 Vitis vinifera HOM05D000002 ORTHO05D004433 3.0e-17 92.0 109 48.6
Solyc11g020213.1 Solanum lycopersicum HOM05D000002 ORTHO05D004433 3.9e-17 91.7 53 77.4
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.9e-17 91.7 130 41.5
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 5.1e-17 91.3 105 45.7
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-16 90.1 109 43.1
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-16 89.7 109 46.8
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 1.9e-16 89.4 108 40.7
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.2e-15 85.9 94 42.6
SHI05550 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-15 85.5 108 47.2
CAN.G1029.1 Capsicum annuum HOM05D000002 ORTHO05D004433 6.3e-15 84.3 62 64.5
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-15 84.0 102 47.1
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 3.1e-14 82.0 107 40.2
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 5.3e-14 81.3 108 44.4
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-14 80.5 107 39.3
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-14 80.5 107 39.3
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 3.4e-13 78.6 106 42.5
CAN.G492.33 Capsicum annuum HOM05D000002 ORTHO05D004433 1.0e-12 77.0 90 45.6
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-12 77.0 107 38.3
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-12 77.0 107 38.3
Nn8g39617 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.3e-12 76.6 102 40.2
Ah.01g008320 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.7e-12 76.3 89 40.4
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-12 76.3 90 46.7
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-12 76.3 90 46.7
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-12 75.1 107 40.2
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.8e-12 75.1 107 40.2
SHI04169 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-12 74.7 101 44.6
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.5e-12 73.9 107 39.3
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 8.5e-12 73.9 90 44.4
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-11 73.6 107 39.3
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.9e-11 72.8 99 37.4
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-11 72.8 107 38.3
Oeu032225.1 Olea europaea HOM05D000002 ORTHO05D004433 1.9e-11 72.8 84 48.8
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.2e-11 71.6 90 41.1
CANSAT80G0509 Cannabis sativa HOM05D000054 ORTHO05D000286 4.2e-11 71.6 47 66.0
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.2e-11 71.6 108 38.9
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.5e-11 71.2 106 36.8
SHI21268 Sapria himalayana HOM05D000002 ORTHO05D004433 7.2e-11 70.9 87 46.0
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-10 70.1 48 62.5
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-10 69.3 103 41.7
PGSC0003DMG400046635 Solanum tuberosum HOM05D000002 ORTHO05D004433 3.6e-10 68.6 43 69.8
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-10 68.2 108 38.0
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-09 66.6 107 37.4
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-09 66.2 109 37.6
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-09 65.1 103 35.9
Sopen01g014490 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-08 63.5 46 56.5
GSVIVG01013966001 Vitis vinifera HOM05D000002 ORTHO05D004433 2.5e-08 62.4 90 40.0
ECA238G1827 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-08 62.0 103 33.0
Ca_27013_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.3e-07 60.1 114 31.6
Ca_28459_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-07 60.1 119 34.5
Nn1g03238 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-07 60.1 107 29.0
SEGI_02620 Sequoiadendron giganteum HOM05D000591 ORTHO05D000579 1.3e-07 60.1 125 28.0
Ca_19316_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.7e-07 59.7 119 34.5
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-07 59.7 99 34.3
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-07 59.7 83 41.0
Ca_03879_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 2.8e-07 58.9 116 31.0
Ca_07385_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.8e-07 58.9 116 31.0
QL05p063530 Quercus lobata HOM05D000002 ORTHO05D004433 2.8e-07 58.9 64 45.3
Ca_04990_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.7e-07 58.5 115 33.0
Ca_27838_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.7e-07 58.5 116 31.9
Sopen05g022460 Solanum pennellii HOM05D000006 ORTHO05D000695 3.7e-07 58.5 119 32.8
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-07 58.2 92 40.2
SHI14847 Sapria himalayana HOM05D000002 ORTHO05D004433 4.8e-07 58.2 108 33.3
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 6.3e-07 57.8 92 37.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-07 57.4 90 40.0
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-07 57.4 87 37.9
CAN.G65.42 Capsicum annuum HOM05D000002 ORTHO05D022157 1.1e-06 57.0 34 67.6
SEGI_29380 Sequoiadendron giganteum HOM05D020921 ORTHO05D000001 1.1e-06 57.0 104 33.7
Ca_28113_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.4e-06 56.6 111 32.4
ECA247G3746 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.6 106 33.0
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 56.6 87 40.2
Sopen12g016800 Solanum pennellii HOM05D000006 ORTHO05D000001 1.4e-06 56.6 111 31.5
CiPaw.06G091700 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.8e-06 56.2 108 30.6
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 1.8e-06 56.2 106 32.1
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 56.2 102 34.3
ECA247G1405 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 55.8 96 32.3
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.4e-06 55.8 107 27.1
ECA234G1594 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 55.5 104 34.6
HanXRQChr03g0067731 Helianthus annuus HOM05D000002 ORTHO05D000001 3.1e-06 55.5 102 31.4
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 3.1e-06 55.5 77 42.9
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-06 55.1 106 32.1
Oeu004324.1 Olea europaea HOM05D000002 ORTHO05D004433 4.1e-06 55.1 73 42.5
SEGI_09624 Sequoiadendron giganteum HOM05D000054 ORTHO05D000171 4.1e-06 55.1 101 29.7
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 4.1e-06 55.1 107 28.0
Ca_11977_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 5.3e-06 54.7 116 31.9
Ca_19633_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.3e-06 54.7 119 30.3
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.3e-06 54.7 108 30.6
SEGI_21936 Sequoiadendron giganteum HOM05D000290 ORTHO05D002418 5.3e-06 54.7 126 27.8
ECA232G2570 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-06 54.3 104 34.6
MD16G1129400 Malus domestica HOM05D000001 ORTHO05D022832 9.1e-06 53.9 49 53.1


User provided reference genes

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