Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010675 Solanum tuberosum HOM05D000331 ORTHO05D002018 2.2e-48 195.3 97 100.0
CAN.G504.84 Capsicum annuum HOM05D000331 ORTHO05D002018 2.2e-40 168.7 92 90.2
CAN.G1041.36 Capsicum annuum HOM05D000331 ORTHO05D002018 1.1e-39 166.4 92 89.1
Solyc01g106050.4 Solanum lycopersicum HOM05D000331 ORTHO05D002018 5.4e-39 164.1 92 89.1
Sopen01g048430 Solanum pennellii HOM05D000331 ORTHO05D002018 5.4e-39 164.1 92 89.1
Nitab4.5_0001773g0030 Nicotiana tabacum HOM05D000331 ORTHO05D002018 9.9e-33 143.3 86 83.7
Nitab4.5_0000088g0030 Nicotiana tabacum HOM05D000331 ORTHO05D002018 3.8e-32 141.4 94 75.5
Solyc11g043210.3 Solanum lycopersicum HOM05D000331 ORTHO05D002018 2.4e-31 138.7 93 76.3
Nitab4.5_0008268g0020 Nicotiana tabacum HOM05D000331 ORTHO05D002018 3.2e-31 138.3 94 76.6
Nitab4.5_0007950g0010 Nicotiana tabacum HOM05D000331 ORTHO05D002018 4.2e-31 137.9 86 81.4
Actinidia02400 Actinidia chinensis HOM05D000331 ORTHO05D002018 1.6e-30 136.0 94 72.3
Thecc.02G127800 Theobroma cacao HOM05D000331 ORTHO05D002018 3.5e-30 134.8 94 72.3
Dinv16009 Davidia involucrata HOM05D000331 ORTHO05D002018 4.6e-30 134.4 91 71.4
Sopen11g019650 Solanum pennellii HOM05D000331 ORTHO05D002018 1.3e-29 132.9 93 75.3
Peaxi162Scf00299g00549 Petunia axillaris HOM05D000331 ORTHO05D002018 1.8e-29 132.5 87 79.3
Duzib132G0773 Durio zibethinus HOM05D000331 ORTHO05D002018 2.3e-29 132.1 94 71.3
TAR376G0912 Trochodendron aralioides HOM05D000331 ORTHO05D002018 2.3e-29 132.1 91 72.5
Hma1.2p1_0435F.1_g152700 Hydrangea macrophylla HOM05D000331 ORTHO05D002018 6.7e-29 130.6 91 71.4
vmacro01868 Vaccinium macrocarpon HOM05D000331 ORTHO05D002018 8.7e-29 130.2 93 71.0
Peaxi162Scf00152g00829 Petunia axillaris HOM05D000331 ORTHO05D002018 1.1e-28 129.8 90 72.2
QL11p025665 Quercus lobata HOM05D000331 ORTHO05D002018 5.6e-28 127.5 91 71.4
Manes.07G041100 Manihot esculenta HOM05D000331 ORTHO05D002018 7.4e-28 127.1 91 71.4
COL.COLO4_32409 Corchorus olitorius HOM05D000331 ORTHO05D002018 9.6e-28 126.7 82 75.6
Duzib052G0965 Durio zibethinus HOM05D000331 ORTHO05D002018 9.6e-28 126.7 90 68.9
GSVIVG01012532001 Vitis vinifera HOM05D000331 ORTHO05D002018 9.6e-28 126.7 93 68.8
Ciclev10027825m.g Citrus clementina HOM05D000331 ORTHO05D002018 1.3e-27 126.3 91 68.1
Cfa004837 Carpinus fangiana HOM05D000331 ORTHO05D002018 1.6e-27 125.9 92 68.5
Cc02_g20790 Coffea canephora HOM05D000331 ORTHO05D002018 1.6e-27 125.9 92 70.7
SGA_v2.0_scaffold219G42558 Striga asiatica HOM05D000331 ORTHO05D002018 1.6e-27 125.9 93 69.9
Gohir.A12G016966 Gossypium hirsutum HOM05D000331 ORTHO05D002018 2.1e-27 125.6 94 68.1
Rhsim11G0141700 Rhododendron simsii HOM05D000331 ORTHO05D002018 2.1e-27 125.6 94 67.0
Atru.chr6.1299 Acer truncatum HOM05D000331 ORTHO05D002018 3.7e-27 124.8 94 66.0
MD10G1055800 Malus domestica HOM05D000331 ORTHO05D002018 3.7e-27 124.8 91 70.3
Cpa.g.sc20.20 Carica papaya HOM05D000331 ORTHO05D002018 8.1e-27 123.6 92 65.2
Gohir.A03G177700 Gossypium hirsutum HOM05D000331 ORTHO05D002018 8.1e-27 123.6 94 66.0
Oeu010521.1 Olea europaea HOM05D000331 ORTHO05D002018 8.1e-27 123.6 94 64.9
CiPaw.05G028700 Carya illinoinensis HOM05D000331 ORTHO05D002018 1.1e-26 123.2 94 66.0
MD05G1049000 Malus domestica HOM05D000331 ORTHO05D002018 1.1e-26 123.2 91 69.2
CiPaw.06G158600 Carya illinoinensis HOM05D000331 ORTHO05D002018 1.4e-26 122.9 94 68.1
Prupe.8G071400 Prunus persica HOM05D000331 ORTHO05D002018 1.8e-26 122.5 91 69.2
Nn5g29832 Nelumbo nucifera HOM05D000331 ORTHO05D002018 4.0e-26 121.3 94 64.9
Gohir.D02G201400 Gossypium hirsutum HOM05D000331 ORTHO05D002018 5.3e-26 120.9 94 64.9
Oeu059904.1 Olea europaea HOM05D000331 ORTHO05D002018 5.3e-26 120.9 80 71.2
Gorai.005G226100 Gossypium raimondii HOM05D000331 ORTHO05D002018 6.9e-26 120.6 94 64.9
Gorai.008G017900 Gossypium raimondii HOM05D000331 ORTHO05D002018 6.9e-26 120.6 91 65.9
Haze_10495 Corylus avellana HOM05D000331 ORTHO05D002018 1.2e-25 119.8 89 69.7
Oeu059903.1 Olea europaea HOM05D000331 ORTHO05D002018 1.2e-25 119.8 80 70.0
CSS0013397 Camellia sinensis var. sinensis HOM05D000331 ORTHO05D002018 2.0e-25 119.0 82 72.0
Potri.007G118300 Populus trichocarpa HOM05D000331 ORTHO05D002018 2.0e-25 119.0 91 70.3
Hma1.2p1_0908F.1_g235520 Hydrangea macrophylla HOM05D000331 ORTHO05D002018 2.6e-25 118.6 82 72.0
Lj9C347G7 Lonicera japonica HOM05D000331 ORTHO05D002018 3.4e-25 118.2 92 67.4
MSTRG.27817 Avicennia marina HOM05D000331 ORTHO05D002018 7.6e-25 117.1 94 64.9
CSS0046653 Camellia sinensis var. sinensis HOM05D000331 ORTHO05D002018 7.6e-25 117.1 82 70.7
Manes.10G097300 Manihot esculenta HOM05D000331 ORTHO05D002018 7.6e-25 117.1 91 68.1
DCAR_021904 Daucus carota HOM05D000331 ORTHO05D002018 1.7e-24 115.9 94 66.0
Oeu063547.1 Olea europaea HOM05D000331 ORTHO05D002018 1.7e-24 115.9 78 69.2
Sabra07G0095600 Salix brachista HOM05D000331 ORTHO05D002018 2.9e-24 115.2 91 68.1
Hund06471 Selenicereus undatus HOM05D000331 ORTHO05D002018 2.9e-24 115.2 91 67.0
Duzib248G0980 Durio zibethinus HOM05D000331 ORTHO05D002018 3.8e-24 114.8 94 63.8
Gohir.D13G049100 Gossypium hirsutum HOM05D000331 ORTHO05D002018 3.8e-24 114.8 92 66.3
Gorai.013G054900 Gossypium raimondii HOM05D000331 ORTHO05D002018 3.8e-24 114.8 92 66.3
ECA234G3483 Erigeron canadensis HOM05D000331 ORTHO05D002018 4.9e-24 114.4 92 68.5
ECA240G3290 Erigeron canadensis HOM05D000331 ORTHO05D002018 6.4e-24 114.0 91 63.7
Migut.N01101 Erythranthe guttata HOM05D000331 ORTHO05D002018 6.4e-24 114.0 95 65.3
SalBow6G0885 Salvia bowleyana HOM05D000331 ORTHO05D002018 1.1e-23 113.2 90 65.6
SGA_v2.0_scaffold337G49165 Striga asiatica HOM05D000331 ORTHO05D002018 1.1e-23 113.2 93 61.3
Eucgr.I02611 Eucalyptus grandis HOM05D000331 ORTHO05D002018 1.4e-23 112.8 95 63.2
Lj5C229G23 Lonicera japonica HOM05D000331 ORTHO05D002018 2.4e-23 112.1 92 64.1
TWI14G0887 Tripterygium wilfordii HOM05D000331 ORTHO05D002018 3.2e-23 111.7 95 65.3
Sed0026197 Sechium edule HOM05D000331 ORTHO05D002018 4.2e-23 111.3 93 59.1
Sabra17G0028500 Salix brachista HOM05D000331 ORTHO05D002018 5.5e-23 110.9 91 65.9
EL10Ac9g22058 Beta vulgaris HOM05D000331 ORTHO05D002018 7.1e-23 110.5 94 61.7
TAR628G0314 Trochodendron aralioides HOM05D000331 ORTHO05D002018 7.1e-23 110.5 70 74.3
ClCG09G016210 Citrullus lanatus HOM05D000331 ORTHO05D002018 1.2e-22 109.8 80 67.5
PGR142G4428 Punica granatum HOM05D000331 ORTHO05D002018 2.1e-22 109.0 91 62.6
HanXRQChr16g0514511 Helianthus annuus HOM05D000331 ORTHO05D002018 2.7e-22 108.6 92 62.0
Actinidia28025 Actinidia chinensis HOM05D000331 ORTHO05D002018 4.6e-22 107.8 83 67.5
RcHm_v2.0_Chr6g0270491 Rosa chinensis HOM05D000331 ORTHO05D002018 6.0e-22 107.5 94 62.8
Glyma.13G256100 Glycine max HOM05D000331 ORTHO05D002018 7.9e-22 107.1 89 67.4
Sed0001354 Sechium edule HOM05D000331 ORTHO05D002018 7.9e-22 107.1 82 59.8
AUR62030938 Chenopodium quinoa HOM05D000331 ORTHO05D002018 1.8e-21 105.9 93 59.1
Aqoxy5G01353 Aquilegia oxysepala HOM05D000331 ORTHO05D002018 2.3e-21 105.5 93 58.1
Glyma.15G058700 Glycine max HOM05D000331 ORTHO05D002018 3.9e-21 104.8 89 66.3
Potri.017G041800 Populus trichocarpa HOM05D000331 ORTHO05D002018 3.9e-21 104.8 80 68.8
FAN24G3179 Fragaria x ananassa HOM05D000331 ORTHO05D002018 6.7e-21 104.0 95 63.2
Lalb_Chr18g0060391 Lupinus albus HOM05D000331 ORTHO05D002018 6.7e-21 104.0 92 66.3
FAN15G2926 Fragaria x ananassa HOM05D000331 ORTHO05D002018 8.7e-21 103.6 95 61.1
FAN20G3059 Fragaria x ananassa HOM05D000331 ORTHO05D002018 1.5e-20 102.8 95 62.1
Lj6g0019027 Lotus japonicus HOM05D000331 ORTHO05D002018 1.5e-20 102.8 89 62.9
Oeu027057.1 Olea europaea HOM05D000331 ORTHO05D002018 1.5e-20 102.8 93 55.9
Oeu027059.2 Olea europaea HOM05D000331 ORTHO05D002018 1.5e-20 102.8 93 55.9
TWI59G0920 Tripterygium wilfordii HOM05D000331 ORTHO05D002018 1.5e-20 102.8 95 62.1
VMungo0540G2460 Vigna mungo HOM05D000331 ORTHO05D002018 1.5e-20 102.8 93 65.6
FAN27G2938 Fragaria x ananassa HOM05D000331 ORTHO05D002018 1.9e-20 102.4 95 61.1
Phvul.006G201400 Phaseolus vulgaris HOM05D000331 ORTHO05D002018 2.5e-20 102.1 89 64.0
AUR62027096 Chenopodium quinoa HOM05D000331 ORTHO05D002018 3.3e-20 101.7 92 58.7
Ah.01g023860 Amaranthus hybridus HOM05D000331 ORTHO05D002018 5.6e-20 100.9 91 58.2
Medtr2g009690 Medicago truncatula HOM05D000331 ORTHO05D002018 7.4e-20 100.5 89 61.8
arahy.Tifrunner.gnm1.ann1.67PN3V Arachis hypogaea HOM05D000331 ORTHO05D002018 9.6e-20 100.1 89 61.8
arahy.Tifrunner.gnm1.ann1.JYI6HY Arachis hypogaea HOM05D000331 ORTHO05D002018 9.6e-20 100.1 89 61.8
THA.LOC104804420 Tarenaya hassleriana HOM05D000331 ORTHO05D002018 9.6e-20 100.1 90 62.2
Ah.01g007350 Amaranthus hybridus HOM05D000331 ORTHO05D002018 2.8e-19 98.6 91 56.0
Lalb_Chr20g0122931 Lupinus albus HOM05D000331 ORTHO05D002018 3.7e-19 98.2 92 59.8
ClCG10G009650 Citrullus lanatus HOM05D000331 ORTHO05D002018 4.8e-19 97.8 80 62.5
Psat1g213760 Pisum sativum HOM05D000331 ORTHO05D002018 4.8e-19 97.8 89 60.7
DCAR_021903 Daucus carota HOM05D000331 ORTHO05D002018 8.2e-19 97.1 68 69.1
Rhsim05G0101000 Rhododendron simsii HOM05D000331 ORTHO05D002018 1.8e-18 95.9 82 62.2
Sc18g0007090 Simmondsia chinensis HOM05D000331 ORTHO05D002018 4.0e-18 94.7 92 54.3
THA.LOC104820169 Tarenaya hassleriana HOM05D000331 ORTHO05D002018 4.0e-18 94.7 90 57.8
Ca_00168_v3 Cicer arietinum L. HOM05D000331 ORTHO05D002018 5.3e-18 94.4 89 59.6
CsaV3_4G014740 Cucumis sativus L. HOM05D000331 ORTHO05D002018 5.3e-18 94.4 82 58.5
MBI16_g30316_MAGBIO Magnolia biondii HOM05D000331 ORTHO05D002018 5.3e-18 94.4 83 57.8
MBI16_g06009_MAGBIO Magnolia biondii HOM05D000331 ORTHO05D002018 6.9e-18 94.0 94 57.4
TPR.G9509 Trifolium pratense HOM05D000331 ORTHO05D002018 6.9e-18 94.0 87 58.6
HanXRQChr03g0073971 Helianthus annuus HOM05D000331 ORTHO05D002018 9.0e-18 93.6 82 64.6
Actinidia00311 Actinidia chinensis HOM05D001232 ORTHO05D002018 4.5e-17 91.3 54 83.3
CDE02G0778 Ceratophyllum demersum HOM05D000331 ORTHO05D002018 7.6e-17 90.5 93 50.5
Glyma.07G182900 Glycine max HOM05D000331 ORTHO05D002018 7.6e-17 90.5 78 65.4
Lsat_1_v5_gn_5_110221 Lactuca sativa HOM05D000331 ORTHO05D002018 1.0e-16 90.1 94 58.5
Glyma.08G067100 Glycine max HOM05D000331 ORTHO05D002018 2.9e-16 88.6 80 66.2
Aqoxy6G00825 Aquilegia oxysepala HOM05D000331 ORTHO05D002018 4.9e-16 87.8 82 59.8
Lalb_Chr15g0090321 Lupinus albus HOM05D000331 ORTHO05D002018 4.9e-16 87.8 90 58.9
Glyma.04G131700 Glycine max HOM05D000331 ORTHO05D002018 6.5e-16 87.4 78 62.8
HPP92_007001 Vanilla planifolia HOM05D000331 ORTHO05D002018 6.5e-16 87.4 89 49.4
ATR0767G113 Amborella trichopoda HOM05D000331 ORTHO05D002018 1.1e-15 86.7 92 50.0
SalBow6G0447 Salvia bowleyana HOM05D000331 ORTHO05D002018 1.9e-15 85.9 94 53.2
SalBow6G4297 Salvia bowleyana HOM05D000331 ORTHO05D002018 1.9e-15 85.9 94 53.2
CsaV3_7G007070 Cucumis sativus L. HOM05D000331 ORTHO05D002018 5.5e-15 84.3 59 69.5
unitig_61.g26049 Utricularia gibba HOM05D000331 ORTHO05D002018 7.1e-15 84.0 92 57.6
MELO3C018587.2 Cucumis melo HOM05D000331 ORTHO05D002018 1.2e-14 83.2 59 67.8
CDE01G0130 Ceratophyllum demersum HOM05D000331 ORTHO05D002018 1.6e-14 82.8 94 48.9
VMungo0251G3578 Vigna mungo HOM05D000331 ORTHO05D002018 1.6e-14 82.8 78 55.1
PSO170G5783 Papaver somniferum HOM05D000331 ORTHO05D002018 4.6e-14 81.3 85 50.6
PSO210G3308 Papaver somniferum HOM05D000331 ORTHO05D002018 4.6e-14 81.3 85 50.6
TAR625G1467 Trochodendron aralioides HOM05D000331 ORTHO05D002018 4.6e-14 81.3 80 55.0
PSO675G5707 Papaver somniferum HOM05D000331 ORTHO05D002018 6.0e-14 80.9 86 54.7
MSTRG.5289 Avicennia marina HOM05D000331 ORTHO05D002018 1.0e-13 80.1 58 67.2
arahy.Tifrunner.gnm1.ann1.K65K48 Arachis hypogaea HOM05D000331 ORTHO05D002018 1.8e-13 79.3 77 58.4
Phvul.002G213900 Phaseolus vulgaris HOM05D000331 ORTHO05D002018 8.7e-13 77.0 75 58.7
arahy.Tifrunner.gnm1.ann1.7I1FTX Arachis hypogaea HOM05D000331 ORTHO05D002018 1.5e-12 76.3 77 57.1
arahy.Tifrunner.gnm1.ann1.SS7XL7 Arachis hypogaea HOM05D000331 ORTHO05D002018 2.5e-12 75.5 79 57.0
SalBow6G6379 Salvia bowleyana HOM05D000331 ORTHO05D002018 5.7e-12 74.3 70 58.6
HanXRQChr09g0246311 Helianthus annuus HOM05D000331 ORTHO05D002018 9.7e-12 73.6 82 56.1
Lsat_1_v5_gn_9_115801 Lactuca sativa HOM05D000331 ORTHO05D002018 1.6e-11 72.8 95 53.7
Migut.B00540 Erythranthe guttata HOM05D000331 ORTHO05D002018 4.8e-11 71.2 64 59.4
Gohir.D12G017700 Gossypium hirsutum HOM05D000331 ORTHO05D002018 6.3e-11 70.9 38 81.6
SHI04933 Sapria himalayana HOM05D000331 ORTHO05D002018 8.2e-11 70.5 73 50.7
Lalb_Chr05g0217841 Lupinus albus HOM05D000331 ORTHO05D002018 1.1e-10 70.1 80 60.0
Os01g0920400 Oryza sativa ssp. japonica HOM05D000331 ORTHO05D002018 4.1e-10 68.2 78 52.6
vmacro19608 Vaccinium macrocarpon HOM05D000331 ORTHO05D002018 4.1e-10 68.2 54 68.5
unitig_60.g25472 Utricularia gibba HOM05D000331 ORTHO05D002018 9.0e-10 67.0 83 50.6
AUR62003686 Chenopodium quinoa HOM05D000331 ORTHO05D002018 2.0e-09 65.9 41 70.7
Sc07g0000350 Simmondsia chinensis HOM05D000331 ORTHO05D002018 2.0e-09 65.9 45 68.9
Zm00001eb364470 Zea mays HOM05D000331 ORTHO05D002018 5.9e-09 64.3 80 53.8
Ah.03g143280 Amaranthus hybridus HOM05D000331 ORTHO05D002018 7.6e-09 63.9 41 68.3
AUR62017998 Chenopodium quinoa HOM05D000331 ORTHO05D002018 7.6e-09 63.9 38 73.7
Hund14077 Selenicereus undatus HOM05D000331 ORTHO05D002018 3.8e-08 61.6 41 65.9
TPR.G2891 Trifolium pratense HOM05D000331 ORTHO05D002018 1.2e-06 56.6 40 72.5
EL10Ac6g15175 Beta vulgaris HOM05D000331 ORTHO05D002018 1.6e-06 56.2 42 64.3
Lj4g0011564 Lotus japonicus HOM05D000331 ORTHO05D002018 4.6e-06 54.7 41 65.9
Ca_18392_v3 Cicer arietinum L. HOM05D000331 ORTHO05D002018 6.1e-06 54.3 40 70.0


User provided reference genes

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