Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.2e-271 938.3 457 100.0
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 8.8e-265 916.4 457 97.8
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.2e-231 805.4 462 85.3
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 1.1e-225 786.6 451 84.0
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 8.9e-225 783.5 460 83.7
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 4.8e-170 601.7 468 62.0
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 1.7e-167 593.2 457 65.4
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.4e-166 590.1 463 62.2
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 2.7e-165 585.9 458 61.6
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.5e-163 580.1 456 59.9
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.8e-162 575.9 452 60.2
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 2.0e-160 569.7 456 58.6
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.5e-160 568.5 470 58.7
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.0e-159 565.1 452 59.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 1.9e-158 563.1 450 60.2
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 9.4e-158 560.8 464 58.4
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 3.0e-156 555.8 456 57.2
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 9.7e-155 550.8 453 57.6
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 1.1e-153 547.4 450 60.4
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 2.4e-153 546.2 461 57.5
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.1e-153 545.8 466 58.4
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 7.0e-153 544.7 462 56.5
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.5e-152 542.3 453 56.5
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.7e-152 541.2 464 58.4
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 5.0e-151 538.5 453 56.1
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 5.5e-150 535.0 466 57.3
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 9.4e-150 534.3 466 54.9
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 1.2e-149 533.9 466 56.7
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 4.7e-149 531.9 464 54.5
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 9.7e-147 524.2 462 58.4
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 1.7e-146 523.5 451 54.8
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 1.4e-145 520.4 474 56.3
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.2e-144 517.3 461 56.2
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.6e-144 516.9 460 55.9
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 1.6e-144 516.9 452 58.0
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.9e-143 512.7 469 56.1
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 2.1e-141 506.5 454 55.3
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 3.6e-141 505.8 462 54.5
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 8.0e-141 504.6 460 55.2
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 4.0e-140 502.3 454 54.8
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.2e-139 500.7 445 55.7
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 5.4e-137 491.9 455 53.2
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 3.5e-136 489.2 473 52.0
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 5.9e-136 488.4 459 55.3
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.0e-135 487.6 468 54.5
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 2.9e-135 486.1 470 53.4
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 1.1e-134 484.2 478 54.0
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 1.1e-134 484.2 468 52.1
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.2e-133 480.7 451 52.3
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 2.8e-133 479.6 450 51.6
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 6.1e-133 478.4 455 52.7
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 6.1e-133 478.4 470 53.0
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.0e-132 477.6 450 52.0
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.0e-132 477.6 464 51.7
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.4e-132 477.2 450 51.3
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 5.2e-132 475.3 453 51.9
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 8.8e-132 474.6 466 53.4
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.2e-131 474.2 473 52.9
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 5.7e-131 471.9 450 51.1
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.8e-131 471.1 450 51.1
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 3.7e-130 469.2 466 52.1
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 1.1e-129 467.6 444 53.2
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 2.0e-128 463.4 462 51.3
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.5e-128 462.6 462 50.9
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.3e-127 460.7 445 54.6
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.3e-127 460.7 461 51.0
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 2.3e-127 459.9 452 51.5
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 8.6e-127 458.0 465 51.0
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 6.1e-125 451.8 448 51.6
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 2.2e-122 443.4 455 50.8
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.0e-120 436.8 469 48.6
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 2.7e-120 436.4 453 48.8
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.5e-118 430.6 422 53.8
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 5.6e-118 428.7 461 49.5
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 6.4e-114 415.2 454 47.1
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 1.9e-113 413.7 452 46.9
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.2e-112 411.0 437 49.2
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.0e-111 407.9 443 49.0
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 3.0e-111 406.4 454 47.1
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 5.0e-111 405.6 486 46.7
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 6.8e-108 395.2 409 48.9
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 1.2e-107 394.4 437 48.3
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 1.3e-106 391.0 439 47.6
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.1e-105 387.9 443 46.5
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 5.4e-105 385.6 445 44.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 4.6e-104 382.5 322 59.0
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 6.0e-104 382.1 443 48.1
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 7.8e-104 381.7 443 47.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 1.3e-103 380.9 449 47.7
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 1.3e-103 380.9 449 47.7
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 6.6e-103 378.6 430 47.2
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 6.8e-100 368.6 438 47.9
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 8.9e-100 368.2 450 42.9
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.7e-98 364.0 304 58.9
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 2.4e-97 360.1 448 45.5
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 2.7e-96 356.7 448 44.4
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 8.7e-95 351.7 454 43.2
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.8e-92 344.0 275 62.9
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 4.9e-90 335.9 434 45.9
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.1e-81 308.1 356 43.8
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 7.6e-75 285.4 315 50.2
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 2.5e-70 270.4 480 34.6
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.1e-68 263.5 279 48.0
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 8.4e-66 255.4 243 53.1
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 3.2e-65 253.4 321 43.6
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 4.2e-57 226.5 518 31.5
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 2.5e-54 217.2 231 51.9
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 2.6e-51 207.2 384 35.9
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 8.8e-47 192.2 455 27.7
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 5.7e-38 162.9 150 54.0
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 2.6e-35 154.1 544 24.6
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.7e-29 133.7 185 40.0
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.4e-28 131.0 90 64.4
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.7e-26 124.8 99 58.6
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 1.9e-25 121.3 121 48.8
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.2e-24 118.6 129 42.6
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 1.5e-22 111.7 106 47.2
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.1e-20 105.5 89 57.3
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.1e-20 103.6 166 34.3
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.2e-19 102.1 91 53.8
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 1.7e-18 98.2 89 56.2
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.9e-17 94.7 65 61.5
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 6.1e-16 89.7 135 45.9
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.4e-14 83.6 232 32.3
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 5.7e-14 83.2 90 42.2
DCAR_019993 Daucus carota HOM05D003519 ORTHO05D004443 6.8e-07 59.7 137 25.5
SalBow4G1020 Salvia bowleyana HOM05D006323 ORTHO05D007827 4.4e-06 57.0 53 56.6


User provided reference genes

Program Settings