Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.9e-195 685.6 345 100.0
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.4e-174 615.5 343 90.1
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 2.3e-172 609.0 343 89.2
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 3.6e-162 575.1 344 85.5
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.4e-161 573.2 344 84.9
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 2.9e-151 538.9 337 80.7
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 1.1e-129 467.2 346 71.7
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 4.6e-117 425.2 354 61.9
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 7.9e-117 424.5 352 61.4
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 3.3e-115 419.1 357 61.3
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.3e-114 417.2 353 60.3
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.1e-110 404.1 349 61.6
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 6.7e-108 394.8 338 59.2
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.6e-107 392.9 349 61.0
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 5.7e-107 391.7 343 59.8
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 2.8e-106 389.4 356 58.7
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 8.2e-106 387.9 343 59.2
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.4e-105 387.1 352 58.5
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 3.1e-105 386.0 353 57.2
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 9.1e-105 384.4 356 56.7
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 5.9e-104 381.7 355 58.3
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.3e-103 380.6 352 57.7
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.7e-103 380.2 350 57.7
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 2.9e-103 379.4 350 58.6
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 3.8e-103 379.0 356 56.2
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 6.5e-103 378.3 352 58.2
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 8.5e-103 377.9 353 57.8
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 8.5e-103 377.9 364 55.8
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.9e-102 376.7 353 56.7
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 2.5e-102 376.3 351 57.0
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.2e-102 375.9 355 58.3
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 4.2e-102 375.6 347 56.5
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 3.6e-101 372.5 360 55.8
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 4.7e-101 372.1 352 57.7
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 6.1e-101 371.7 352 56.0
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.4e-100 370.5 355 55.2
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 6.7e-100 368.2 355 56.1
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.2e-99 367.5 356 56.5
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.5e-99 367.1 354 55.1
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 2.2e-98 363.2 345 58.8
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 8.2e-98 361.3 357 55.2
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 2.4e-97 359.8 357 54.1
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.2e-96 357.5 343 55.4
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 4.5e-96 355.5 348 52.9
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 2.9e-95 352.8 360 53.1
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 5.0e-95 352.1 342 53.8
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.9e-94 350.1 356 54.8
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.9e-94 350.1 348 54.6
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 1.6e-93 347.1 353 53.3
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 2.1e-93 346.7 349 53.6
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.0e-92 344.4 352 52.6
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 2.3e-92 343.2 362 51.1
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 3.0e-92 342.8 360 52.2
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 8.8e-92 341.3 356 52.5
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.3e-90 337.4 289 58.8
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 2.2e-90 336.7 345 51.6
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 2.8e-90 336.3 350 52.0
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 2.8e-90 336.3 289 60.2
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 2.8e-90 336.3 333 53.5
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 3.7e-90 335.9 350 52.9
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.1e-89 334.3 351 50.1
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 1.4e-89 334.0 346 51.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.4e-89 334.0 391 48.6
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 3.1e-89 332.8 354 53.7
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 3.1e-89 332.8 345 53.3
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 5.4e-89 332.0 350 51.7
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 7.0e-89 331.6 355 53.2
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.6e-88 330.5 346 51.2
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 2.7e-88 329.7 349 50.1
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.3e-87 327.4 353 51.0
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.2e-87 326.6 289 57.8
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 2.9e-87 326.2 349 49.9
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 2.5e-86 323.2 359 48.2
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 1.2e-85 320.9 355 50.4
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.8e-84 317.0 348 50.9
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.3e-84 316.6 352 50.9
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 3.0e-84 316.2 355 49.3
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 2.0e-83 313.5 352 48.6
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.6e-83 313.2 315 51.4
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 3.4e-83 312.8 321 52.0
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.4e-83 312.4 340 50.3
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 4.4e-83 312.4 343 51.9
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 5.7e-83 312.0 441 41.5
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 9.8e-83 311.2 337 52.2
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.1e-81 307.8 288 55.6
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 7.0e-81 305.1 302 52.0
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 2.0e-75 287.0 349 46.1
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 1.8e-73 280.4 341 48.7
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 1.5e-67 260.8 223 61.4
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 2.3e-63 246.9 223 58.7
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 4.9e-58 229.2 169 64.5
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 5.2e-52 209.1 243 49.4
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.9e-49 200.7 321 38.3
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.3e-47 194.5 174 56.9
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 2.1e-40 170.6 300 39.7
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 1.8e-36 157.5 194 46.4
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.9e-34 150.2 168 46.4
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 6.4e-34 149.1 167 46.7
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 1.1e-30 138.3 270 34.1
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 8.1e-29 132.1 343 30.3
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.1e-28 131.7 171 42.7
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.2e-27 128.3 282 33.3
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 8.7e-23 112.1 93 59.1
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 5.6e-22 109.4 143 45.5
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 4.8e-21 106.3 109 48.6
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 5.3e-20 102.8 127 49.6
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.4e-17 94.7 159 36.5
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 3.0e-15 87.0 127 40.9
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 4.3e-14 83.2 125 41.6
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.2e-13 80.9 88 39.8
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 6.5e-10 69.3 85 45.9
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 1.2e-08 65.1 51 56.9
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 1.8e-07 61.2 65 46.2
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 1.9e-06 57.8 42 61.9


User provided reference genes

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