Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 1.1e-60 236.5 119 100.0
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 2.6e-35 152.1 94 87.2
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 4.2e-17 91.7 89 58.4
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 1.1e-14 83.6 111 45.9
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 5.7e-14 81.3 88 53.4
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 1.3e-13 80.1 83 55.4
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 2.8e-13 79.0 96 55.2
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 4.8e-13 78.2 75 57.3
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 1.8e-12 76.3 110 47.3
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 1.8e-12 76.3 98 51.0
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 3.1e-12 75.5 96 52.1
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 5.3e-12 74.7 77 55.8
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 5.3e-12 74.7 101 48.5
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 1.5e-11 73.2 108 44.4
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 2.6e-11 72.4 97 48.5
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 3.4e-11 72.0 97 51.5
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 5.9e-11 71.2 72 58.3
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 5.9e-11 71.2 85 50.6
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 1.7e-10 69.7 89 51.7
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 1.7e-10 69.7 108 43.5
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 2.2e-10 69.3 70 60.0
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 2.9e-10 68.9 69 59.4
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 2.9e-10 68.9 78 52.6
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 2.9e-10 68.9 80 52.5
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 3.8e-10 68.6 73 53.4
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 3.8e-10 68.6 89 49.4
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 5.0e-10 68.2 73 52.1
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 5.0e-10 68.2 109 43.1
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 6.5e-10 67.8 100 48.0
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 6.5e-10 67.8 73 52.1
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 6.5e-10 67.8 69 60.9
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 1.1e-09 67.0 96 46.9
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 1.4e-09 66.6 86 50.0
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 1.9e-09 66.2 70 52.9
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 1.9e-09 66.2 92 44.6
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 2.5e-09 65.9 93 49.5
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 3.2e-09 65.5 108 45.4
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 4.2e-09 65.1 73 50.7
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 5.5e-09 64.7 96 51.0
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 5.5e-09 64.7 114 42.1
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 7.2e-09 64.3 79 51.9
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 7.2e-09 64.3 103 46.6
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 3.6e-08 62.0 101 48.5
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 3.6e-08 62.0 101 48.5
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 3.6e-08 62.0 71 52.1
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 4.7e-08 61.6 98 42.9
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 4.7e-08 61.6 76 52.6
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 6.1e-08 61.2 69 52.2
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 6.1e-08 61.2 47 66.0
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 7.9e-08 60.8 71 50.7
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 7.9e-08 60.8 90 47.8
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 1.4e-07 60.1 79 49.4
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 1.8e-07 59.7 78 46.2
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 5.1e-07 58.2 102 46.1
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 6.7e-07 57.8 96 43.8
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 6.7e-07 57.8 91 48.4
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 1.1e-06 57.0 95 48.4
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 1.1e-06 57.0 102 45.1
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 1.5e-06 56.6 102 45.1
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 1.5e-06 56.6 102 45.1
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 2.6e-06 55.8 95 45.3
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 7.4e-06 54.3 64 53.1


User provided reference genes

Program Settings