Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 5.5e-145 517.7 275 100.0
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 2.2e-141 505.8 274 97.4
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 2.2e-141 505.8 274 97.4
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 1.5e-131 473.0 285 87.0
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 3.9e-127 458.4 338 76.3
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 3.7e-125 451.8 324 77.8
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 4.5e-123 444.9 274 83.2
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 7.7e-123 444.1 273 84.6
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 5.0e-122 441.4 271 84.9
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 1.9e-121 439.5 274 81.8
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 4.2e-121 438.3 274 82.1
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 1.6e-120 436.4 271 83.0
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 2.7e-120 435.6 274 82.5
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 1.0e-119 433.7 268 83.6
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 6.8e-119 431.0 275 80.7
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 1.2e-118 430.3 269 82.5
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 7.5e-118 427.6 278 80.9
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 2.2e-117 426.0 274 79.6
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 6.3e-117 424.5 274 80.3
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 1.8e-116 422.9 269 80.3
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.1e-116 422.2 269 80.3
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 7.0e-116 421.0 269 79.6
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 7.0e-116 421.0 269 79.6
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 9.1e-116 420.6 272 80.5
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 9.1e-116 420.6 269 81.8
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 1.6e-115 419.9 271 77.9
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 4.5e-115 418.3 271 77.1
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 4.5e-115 418.3 269 79.2
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 4.5e-115 418.3 272 77.6
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 7.7e-115 417.5 269 81.0
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 7.7e-115 417.5 271 77.1
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 1.0e-114 417.2 272 81.6
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 1.7e-114 416.4 291 75.9
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 2.2e-114 416.0 273 78.8
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 3.8e-114 415.2 269 81.8
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.8e-114 415.2 269 78.4
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 3.8e-114 415.2 272 80.9
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 6.5e-114 414.5 269 78.4
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 8.5e-114 414.1 271 80.1
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 1.1e-113 413.7 269 77.7
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 1.5e-113 413.3 269 81.4
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 1.5e-113 413.3 269 79.2
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 1.5e-113 413.3 275 78.5
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 3.2e-113 412.1 272 77.6
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 4.2e-113 411.8 269 78.1
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 7.2e-113 411.0 270 78.1
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 1.2e-112 410.2 269 79.2
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 2.1e-112 409.5 268 78.0
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 3.6e-112 408.7 270 78.5
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.6e-112 408.7 279 76.3
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 3.6e-112 408.7 272 79.8
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 4.7e-112 408.3 272 77.9
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 6.1e-112 407.9 269 76.2
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 6.1e-112 407.9 273 76.6
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 1.0e-111 407.1 270 79.3
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 1.4e-111 406.8 272 77.2
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 2.3e-111 406.0 272 76.1
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 3.0e-111 405.6 271 76.0
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 3.0e-111 405.6 274 78.1
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 3.0e-111 405.6 274 75.5
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 5.2e-111 404.8 270 77.0
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 6.8e-111 404.4 269 76.2
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 1.2e-110 403.7 272 76.8
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 2.0e-110 402.9 270 76.7
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 3.4e-110 402.1 274 77.0
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 4.4e-110 401.7 273 75.5
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 4.4e-110 401.7 274 78.1
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 7.5e-110 401.0 272 76.1
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 9.8e-110 400.6 273 75.5
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 1.3e-109 400.2 272 75.4
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 1.7e-109 399.8 270 75.9
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 2.2e-109 399.4 274 76.6
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 2.2e-109 399.4 272 75.0
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 3.7e-109 398.7 273 75.8
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 4.9e-109 398.3 273 74.7
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 8.3e-109 397.5 274 75.2
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 8.3e-109 397.5 269 75.8
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 1.4e-108 396.7 274 75.2
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 4.1e-108 395.2 269 75.1
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 9.1e-108 394.0 272 75.4
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 9.1e-108 394.0 273 74.7
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 5.9e-107 391.3 274 75.2
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 3.8e-106 388.7 272 74.6
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 5.0e-106 388.3 269 76.6
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 6.6e-106 387.9 272 74.3
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 1.5e-105 386.7 272 73.9
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 1.9e-105 386.3 364 61.5
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 2.5e-105 386.0 272 74.3
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 4.2e-105 385.2 270 74.1
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 4.2e-105 385.2 270 74.1
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 4.2e-105 385.2 272 73.5
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 9.5e-105 384.0 270 74.1
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 1.6e-104 383.3 270 73.7
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 1.6e-104 383.3 270 73.7
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 4.7e-104 381.7 304 67.4
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 8.0e-104 380.9 270 73.7
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 1.4e-103 380.2 283 71.4
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 2.3e-103 379.4 269 73.6
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.6e-102 375.9 265 73.6
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 4.4e-102 375.2 265 73.2
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 1.3e-101 373.6 269 72.5
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 1.3e-101 373.6 253 76.7
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 2.2e-101 372.9 269 72.1
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 2.2e-101 372.9 269 72.1
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 2.2e-101 372.9 269 72.1
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 8.3e-101 370.9 266 72.9
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 9.2e-100 367.5 314 63.7
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 1.2e-99 367.1 273 71.4
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 1.2e-99 367.1 268 70.9
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 2.7e-99 365.9 266 69.2
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 3.5e-99 365.5 268 70.1
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 1.1e-97 360.5 265 73.2
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 1.5e-94 350.1 264 68.9
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 3.2e-92 342.4 262 66.0
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 4.6e-91 338.6 273 63.0
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 6.0e-91 338.2 483 46.6
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.7e-90 336.7 483 46.4
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 6.2e-88 328.2 270 62.2
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 3.2e-84 315.8 211 77.7
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 1.2e-83 313.9 282 60.6
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 1.9e-81 306.6 262 59.5
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 3.3e-81 305.8 274 57.7
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 3.3e-81 305.8 265 60.8
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 7.3e-81 304.7 262 60.7
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 3.7e-77 292.4 250 62.8
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 3.5e-75 285.8 262 54.6
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 2.3e-74 283.1 251 62.2
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 5.1e-74 282.0 254 62.6
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 1.5e-73 280.4 274 53.6
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 3.3e-73 279.3 255 62.4
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 9.6e-73 277.7 277 56.7
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 1.2e-72 277.3 278 56.1
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 6.8e-71 271.6 277 56.3
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 1.5e-70 270.4 278 56.1
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 3.4e-70 269.2 268 52.6
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 5.8e-70 268.5 278 56.1
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 9.3e-68 261.2 161 82.0
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 5.1e-66 255.4 292 55.1
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 6.6e-66 255.0 255 59.2
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 8.1e-64 248.1 222 62.2
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 8.4e-61 238.0 252 55.6
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 8.4e-61 238.0 276 52.9
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 5.4e-60 235.3 269 52.4
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 2.5e-57 226.5 263 47.9
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 5.6e-57 225.3 144 76.4
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 7.1e-52 208.4 247 49.0
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 1.8e-50 203.8 267 47.9
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 3.3e-49 199.5 131 76.3
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 7.6e-46 188.3 133 75.2
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 6.5e-45 185.3 131 71.8
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.6e-43 180.6 148 64.9
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 1.3e-42 177.6 136 66.2
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 2.5e-41 173.3 410 34.1
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 3.3e-41 172.9 227 48.0
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.7e-40 169.5 161 60.2
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 1.2e-38 164.5 97 86.6
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 8.4e-37 158.3 129 65.1
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.7e-35 153.3 119 69.7
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 3.7e-32 142.9 117 65.0
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 8.5e-29 131.7 261 33.3
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 2.1e-27 127.1 263 33.5
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 1.5e-25 120.9 142 51.4
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 6.3e-24 115.5 283 29.7
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 2.0e-22 110.5 70 84.3
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.9e-21 106.7 150 45.3
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 3.3e-17 93.2 52 90.4
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 3.3e-17 93.2 72 70.8
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 4.4e-17 92.8 52 88.5
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 4.4e-17 92.8 52 88.5
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 9.7e-17 91.7 52 88.5
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 2.2e-16 90.5 52 88.5
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 3.7e-16 89.7 69 60.9
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 6.3e-16 89.0 59 76.3
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 8.2e-16 88.6 58 69.0
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 2.4e-15 87.0 50 86.0
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 7.0e-15 85.5 63 65.1
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 7.0e-15 85.5 70 61.4
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 9.1e-15 85.1 86 54.7
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-14 84.7 55 78.2
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 4.5e-14 82.8 53 69.8
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 5.0e-13 79.3 64 59.4
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 5.0e-13 79.3 64 59.4
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 5.5e-12 75.9 64 56.2
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 9.4e-12 75.1 61 60.7
SalBow6G3161 Salvia bowleyana HOM05D021775 ORTHO05D004209 1.8e-07 60.8 40 75.0
PGSC0003DMG400015750 Solanum tuberosum HOM05D008774 ORTHO05D010951 2.0e-06 57.4 34 85.3


User provided reference genes

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