Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 6.2e-148 528.9 717 100.0
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 9.0e-139 498.4 717 97.6
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 1.1e-136 491.5 717 97.4
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 7.4e-109 399.1 719 91.9
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 1.2e-106 391.7 715 91.7
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.5e-56 225.3 628 75.0
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 2.3e-54 218.0 131 87.8
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 5.1e-49 200.3 712 64.7
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 6.8e-46 189.9 651 78.8
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.2e-45 189.1 661 82.9
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 1.2e-45 189.1 651 83.4
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 9.9e-45 186.0 704 79.4
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.3e-44 185.7 197 56.9
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.7e-44 185.3 680 75.6
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 2.4e-43 181.4 704 79.4
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 9.2e-43 179.5 717 78.2
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.6e-42 178.7 137 67.9
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 4.6e-42 177.2 706 75.1
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 7.8e-42 176.4 136 67.6
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 7.8e-42 176.4 659 82.5
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.0e-41 176.0 150 62.7
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.7e-41 175.3 681 76.4
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 3.0e-41 174.5 652 73.6
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 3.0e-41 174.5 667 81.6
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 3.0e-41 174.5 665 83.0
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 3.0e-41 174.5 649 83.4
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 5.1e-41 173.7 681 76.2
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 8.6e-41 172.9 197 53.3
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 1.5e-40 172.2 683 75.3
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 7.3e-40 169.9 677 80.1
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 1.2e-39 169.1 706 75.4
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.2e-39 169.1 145 62.1
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 1.6e-39 168.7 654 82.4
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 3.6e-39 167.5 711 77.5
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 4.7e-39 167.2 137 65.7
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 8.1e-39 166.4 684 68.4
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.8e-38 165.2 221 46.2
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 1.8e-38 165.2 704 72.3
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 5.2e-38 163.7 196 49.0
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 6.8e-38 163.3 671 80.8
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 8.9e-38 162.9 648 82.7
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.0e-37 161.8 655 81.1
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.0e-37 161.8 194 49.5
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 2.0e-37 161.8 651 82.3
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 3.4e-37 161.0 90 90.0
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 3.4e-37 161.0 662 71.5
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 4.4e-37 160.6 142 62.0
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 4.4e-37 160.6 142 58.5
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 1.7e-36 158.7 678 78.8
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 1.7e-36 158.7 678 78.8
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 4.9e-36 157.1 141 59.6
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.1e-35 156.0 198 46.0
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 1.9e-35 155.2 150 56.0
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 2.4e-35 154.8 706 72.9
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 2.4e-35 154.8 649 80.7
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 7.1e-35 153.3 653 81.5
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 4.6e-34 150.6 156 52.6
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 4.6e-34 150.6 703 71.8
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 6.0e-34 150.2 199 46.7
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 6.0e-34 150.2 144 56.9
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.8e-34 149.8 144 56.9
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.7e-33 148.7 123 61.0
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 2.3e-33 148.3 140 57.1
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 2.3e-33 148.3 678 78.9
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 5.1e-33 147.1 138 58.0
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 5.1e-33 147.1 111 67.6
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 6.6e-33 146.7 652 81.7
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 8.7e-33 146.4 136 58.1
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.1e-32 146.0 651 81.3
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 1.5e-32 145.6 143 55.2
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 1.5e-32 145.6 152 53.3
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 1.5e-32 145.6 143 55.2
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 1.5e-32 145.6 143 55.2
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 1.5e-32 145.6 152 53.3
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.5e-32 145.6 152 55.9
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 2.5e-32 144.8 652 81.7
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 7.3e-32 143.3 621 84.1
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 2.1e-31 141.7 144 54.2
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 6.2e-31 140.2 649 80.7
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 8.1e-31 139.8 661 80.0
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 4.0e-30 137.5 114 65.8
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 4.4e-29 134.0 127 57.5
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 5.8e-29 133.7 661 78.8
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 7.6e-29 133.3 123 56.1
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 9.9e-29 132.9 127 57.5
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.7e-28 132.1 90 71.1
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 3.8e-28 131.0 104 64.4
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 3.2e-27 127.9 706 63.7
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 5.4e-27 127.1 149 49.0
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 7.9e-26 123.2 94 69.1
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 1.0e-25 122.9 137 48.2
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 1.3e-25 122.5 173 39.9
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 1.5e-24 119.0 84 66.7
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 2.5e-24 118.2 677 60.9
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 7.3e-24 116.7 92 60.9
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.1e-22 112.8 113 54.0
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 1.4e-22 112.5 129 47.3
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.8e-22 112.1 95 61.1
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 1.8e-22 112.1 151 45.7
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 5.3e-22 110.5 151 45.0
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 6.9e-22 110.2 99 56.6
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 1.4e-19 102.4 136 43.4
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.7e-18 98.2 95 53.7
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 3.0e-17 94.7 68 66.2
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 2.5e-16 91.7 90 56.7
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 2.5e-16 91.7 90 56.7
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 1.6e-15 89.0 92 42.4
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.4e-13 81.3 57 68.4
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 7.6e-13 80.1 65 63.1
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.7e-12 79.0 50 78.0
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 2.2e-12 78.6 67 62.7
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.6e-10 72.4 145 33.8
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.6e-10 72.4 145 33.8
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 2.1e-07 62.0 108 35.2


User provided reference genes

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