Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 1.3e-208 729.6 381 100.0
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 1.1e-196 689.9 381 94.5
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 9.8e-193 676.8 370 95.1
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 4.3e-180 634.8 383 87.7
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 8.6e-165 583.9 386 83.2
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 1.5e-156 556.6 386 78.8
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 2.2e-136 489.6 368 74.5
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 8.5e-104 381.3 464 50.4
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.6e-102 377.1 462 50.2
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 1.9e-95 353.6 423 50.8
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 1.2e-94 350.9 451 49.4
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 3.0e-93 346.3 400 51.5
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 2.0e-92 343.6 485 46.6
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 2.6e-92 343.2 444 45.7
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 3.7e-91 339.3 393 51.7
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 8.3e-91 338.2 439 49.4
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 2.4e-90 336.7 393 51.4
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 3.1e-90 336.3 432 48.1
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 3.1e-90 336.3 451 47.9
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 1.3e-88 330.9 427 48.5
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 1.1e-87 327.8 418 48.8
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 4.2e-87 325.9 355 53.5
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 9.4e-87 324.7 454 44.7
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 1.0e-85 321.2 417 45.1
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 1.4e-85 320.9 435 46.2
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.4e-85 320.9 447 46.3
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 1.8e-85 320.5 402 49.0
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 3.0e-85 319.7 452 45.4
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 5.2e-85 318.9 432 46.5
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 6.8e-85 318.5 440 47.0
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 4.4e-84 315.8 408 45.6
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 7.5e-84 315.1 412 46.1
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 3.7e-83 312.8 352 54.0
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 8.3e-83 311.6 429 47.6
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 1.4e-82 310.8 335 53.7
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.8e-82 310.5 410 47.8
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 5.4e-82 308.9 414 48.8
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 5.4e-82 308.9 393 47.8
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 7.0e-82 308.5 416 48.1
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 7.0e-82 308.5 274 60.6
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 7.0e-82 308.5 464 43.8
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 2.7e-81 306.6 438 48.2
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 3.5e-81 306.2 440 45.2
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 5.9e-81 305.4 444 46.8
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 5.9e-81 305.4 444 43.7
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 1.3e-80 304.3 455 44.6
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 2.9e-80 303.1 326 51.5
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 2.9e-80 303.1 357 49.9
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 3.8e-80 302.8 439 46.9
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 1.1e-79 301.2 416 45.0
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 1.5e-79 300.8 389 47.0
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 4.2e-79 299.3 429 44.8
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 9.5e-79 298.1 396 46.0
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 1.2e-78 297.7 330 50.9
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.2e-78 297.7 434 44.5
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 6.1e-78 295.4 399 46.1
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 8.0e-78 295.0 428 47.2
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 1.4e-77 294.3 413 46.5
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 1.8e-77 293.9 335 49.3
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 6.8e-77 292.0 376 50.3
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 6.8e-77 292.0 319 53.0
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 8.9e-77 291.6 335 50.4
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 8.9e-77 291.6 335 50.4
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 1.5e-76 290.8 407 45.2
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 2.6e-76 290.0 225 63.1
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 3.4e-76 289.7 327 50.8
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 5.7e-76 288.9 332 49.4
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.7e-76 288.9 435 43.9
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 9.8e-76 288.1 331 49.8
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.3e-75 287.7 334 48.8
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 1.3e-75 287.7 374 48.1
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 2.2e-75 287.0 331 49.2
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 6.3e-75 285.4 445 44.5
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 6.3e-75 285.4 347 47.8
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 8.3e-75 285.0 362 49.2
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 7.0e-74 282.0 218 66.1
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 9.2e-74 281.6 257 58.8
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 9.2e-74 281.6 326 48.5
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 2.0e-73 280.4 243 59.7
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 2.0e-73 280.4 416 45.2
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 8.6e-72 275.0 379 47.2
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 8.6e-72 275.0 324 49.1
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 3.3e-71 273.1 251 59.4
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 2.8e-70 270.0 312 50.6
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 6.8e-69 265.4 340 45.9
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 8.9e-69 265.0 353 48.7
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 4.9e-67 259.2 349 45.3
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 6.4e-67 258.8 436 41.7
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 3.6e-62 243.0 229 56.3
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 8.0e-62 241.9 416 39.7
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.6e-60 236.9 405 41.5
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 5.8e-60 235.7 399 40.1
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 4.9e-59 232.6 275 48.7
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 2.4e-58 230.3 329 44.4
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 5.1e-56 222.6 144 73.6
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 3.2e-50 203.4 159 63.5
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 5.4e-50 202.6 249 43.4
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 7.1e-50 202.2 331 43.2
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 7.8e-49 198.7 345 36.8
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.0e-48 198.4 373 37.5
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 2.3e-48 197.2 280 43.9
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 2.3e-48 197.2 368 38.3
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 1.2e-46 191.4 213 46.9
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 6.2e-46 189.1 224 47.8
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 5.2e-45 186.0 344 36.6
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.2e-44 184.9 121 70.2
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.4e-42 176.0 127 67.7
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 1.1e-31 141.7 212 42.9
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.4e-29 134.8 185 49.7
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.4e-26 122.9 125 53.6
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 2.1e-25 120.9 167 37.1
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 5.1e-24 116.3 304 34.5
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 2.9e-19 100.5 72 66.7
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 4.9e-19 99.8 270 30.0
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 1.1e-18 98.6 105 41.0
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 5.5e-18 96.3 79 62.0
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 3.7e-14 83.6 161 34.8
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 5.8e-12 76.3 251 32.3
BcaC05g27591 Brassica carinata HOM05D006487 ORTHO05D007982 2.1e-09 67.8 111 45.0
BcaC05g27879 Brassica carinata HOM05D024450 ORTHO05D007982 7.4e-07 59.3 75 52.0


User provided reference genes

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