Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010147 Solanum tuberosum HOM05D013910 ORTHO05D014685 7.6e-129 463.8 222 100.0
PGSC0003DMG400010137 Solanum tuberosum HOM05D013910 ORTHO05D014685 2.7e-62 242.7 228 56.6
PGSC0003DMG400010139 Solanum tuberosum HOM05D013910 ORTHO05D014685 1.4e-61 240.4 225 57.8
PGSC0003DMG400010143 Solanum tuberosum HOM05D013910 ORTHO05D014685 3.0e-61 239.2 225 57.8
PGSC0003DMG400010146 Solanum tuberosum HOM05D013910 ORTHO05D014685 1.5e-60 236.9 223 55.6
Solyc03g098700.1 Solanum lycopersicum HOM05D013910 ORTHO05D014685 6.1e-54 214.9 217 53.0
Sopen03g029410 Solanum pennellii HOM05D013910 ORTHO05D014685 8.0e-54 214.5 221 52.9
PGSC0003DMG400010134 Solanum tuberosum HOM05D013910 ORTHO05D014685 2.3e-48 196.4 188 52.1
PGSC0003DMG400010141 Solanum tuberosum HOM05D000535 ORTHO05D014685 2.5e-31 139.8 236 42.8
Nitab4.5_0016396g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 8.1e-30 134.8 248 44.0
PGSC0003DMG400010136 Solanum tuberosum HOM05D000535 ORTHO05D014685 2.3e-29 133.3 240 40.0
Sopen03g029420 Solanum pennellii HOM05D000535 ORTHO05D014685 2.7e-25 119.8 236 37.3
PGSC0003DMG400010144 Solanum tuberosum HOM05D000535 ORTHO05D014685 7.8e-25 118.2 234 39.3
Solyc03g098710.1 Solanum lycopersicum HOM05D000535 ORTHO05D014685 1.0e-24 117.9 238 35.7
PGSC0003DMG400010145 Solanum tuberosum HOM05D013910 ORTHO05D014685 3.4e-20 102.8 137 43.1
Dinv12307 Davidia involucrata HOM05D000535 ORTHO05D000006 1.1e-15 87.8 183 36.1
MSTRG.11520 Avicennia marina HOM05D000535 ORTHO05D000427 7.3e-15 85.1 186 32.3
Hma1.2p1_0807F.1_g221420 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.3e-14 84.3 193 37.3
Hma1.2p1_0807F.1_g221390 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.1e-13 81.3 193 36.8
PGSC0003DMG400010186 Solanum tuberosum HOM05D013910 ORTHO05D397379 2.6e-12 76.6 62 61.3
Nitab4.5_0000339g0150 Nicotiana tabacum HOM05D000535 ORTHO05D000427 7.6e-12 75.1 186 32.3
Dinv10702 Davidia involucrata HOM05D000535 ORTHO05D000427 1.3e-11 74.3 221 32.6
Nitab4.5_0000477g0210 Nicotiana tabacum HOM05D000535 ORTHO05D000427 1.3e-11 74.3 186 32.8
Potri.004G067800 Populus trichocarpa HOM05D000535 ORTHO05D000427 1.7e-11 73.9 187 33.2
Cfa019506 Carpinus fangiana HOM05D000535 ORTHO05D000427 2.2e-11 73.6 185 31.9
Dinv10708 Davidia involucrata HOM05D000535 ORTHO05D000427 2.2e-11 73.6 219 32.4
Duzib268G0986 Durio zibethinus HOM05D000535 ORTHO05D000427 6.4e-11 72.0 187 32.6
Sed0025983 Sechium edule HOM05D000535 ORTHO05D000427 8.4e-11 71.6 185 30.8
MSTRG.11561 Avicennia marina HOM05D000535 ORTHO05D000427 1.4e-10 70.9 184 34.2
Haze_08461 Corylus avellana HOM05D000535 ORTHO05D000427 1.9e-10 70.5 210 30.0
Duzib268G0452 Durio zibethinus HOM05D000535 ORTHO05D000427 1.9e-10 70.5 186 31.7
MSTRG.10952 Avicennia marina HOM05D000535 ORTHO05D000427 2.4e-10 70.1 147 34.0
Gohir.D10G223500 Gossypium hirsutum HOM05D000535 ORTHO05D000427 2.4e-10 70.1 185 33.0
Thecc.03G051600 Theobroma cacao HOM05D000535 ORTHO05D000427 2.4e-10 70.1 190 32.1
Duzib205G1520 Durio zibethinus HOM05D000535 ORTHO05D000427 4.2e-10 69.3 188 34.0
Potri.019G006900 Populus trichocarpa HOM05D000535 ORTHO05D000427 4.2e-10 69.3 187 29.9
Thecc.03G051900 Theobroma cacao HOM05D000535 ORTHO05D000427 4.2e-10 69.3 193 31.6
Gohir.D10G224000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 5.4e-10 68.9 187 31.0
Sabra04G0045700 Salix brachista HOM05D000535 ORTHO05D000427 5.4e-10 68.9 215 29.3
SalBow5G3406 Salvia bowleyana HOM05D000535 ORTHO05D000427 5.4e-10 68.9 185 30.3
MBI06_g27485_MAGBIO Magnolia biondii HOM05D000535 ORTHO05D000427 7.1e-10 68.6 186 33.3
Cc10_g11720 Coffea canephora HOM05D000535 ORTHO05D000427 9.3e-10 68.2 192 30.2
Peaxi162Scf00171g00131 Petunia axillaris HOM05D000535 ORTHO05D000427 1.2e-09 67.8 200 33.5
MSTRG.11531 Avicennia marina HOM05D000535 ORTHO05D000427 1.6e-09 67.4 204 29.9
ClCG02G015990 Citrullus lanatus HOM05D000535 ORTHO05D000427 1.6e-09 67.4 187 29.9
Duzib268G0791 Durio zibethinus HOM05D000535 ORTHO05D000427 2.1e-09 67.0 184 29.9
Duzib268G0985 Durio zibethinus HOM05D000535 ORTHO05D000427 2.1e-09 67.0 186 31.7
Potri.004G000400 Populus trichocarpa HOM05D000535 ORTHO05D000427 2.7e-09 66.6 209 28.7
PGSC0003DMG400010128 Solanum tuberosum HOM05D010028 ORTHO05D012080 2.7e-09 66.6 231 29.9
Duzib268G1310 Durio zibethinus HOM05D000535 ORTHO05D000427 3.5e-09 66.2 186 31.7
Potri.004G067900 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.5e-09 66.2 178 30.9
PGSC0003DMG400046234 Solanum tuberosum HOM05D000535 ORTHO05D011982 6.0e-09 65.5 197 29.9
Medtr3g106620 Medicago truncatula HOM05D000535 ORTHO05D013302 1.0e-08 64.7 182 26.9
arahy.Tifrunner.gnm1.ann1.1T55P5 Arachis hypogaea HOM05D000535 ORTHO05D000427 1.3e-08 64.3 207 28.0
BcaB03g15040 Brassica carinata HOM05D000535 ORTHO05D000427 1.3e-08 64.3 202 30.2
CAN.G128.72 Capsicum annuum HOM05D000535 ORTHO05D000427 1.8e-08 63.9 236 27.1
CsaV3_2G005020 Cucumis sativus L. HOM05D000535 ORTHO05D000427 1.8e-08 63.9 180 28.9
Ca_03923_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 3.9e-08 62.8 185 30.3
Lalb_Chr03g0031361 Lupinus albus HOM05D000535 ORTHO05D000427 6.7e-08 62.0 183 29.0
Potri.007G111500 Populus trichocarpa HOM05D000535 ORTHO05D000427 6.7e-08 62.0 186 27.4
Lalb_Chr19g0133691 Lupinus albus HOM05D000535 ORTHO05D000427 8.7e-08 61.6 193 26.4
Psat1g007640 Pisum sativum HOM05D000535 ORTHO05D000427 8.7e-08 61.6 186 28.0
Potri.007G111800 Populus trichocarpa HOM05D000535 ORTHO05D000427 8.7e-08 61.6 208 26.9
Sabra07G0091600 Salix brachista HOM05D000535 ORTHO05D000427 8.7e-08 61.6 211 27.5
CAN.G765.29 Capsicum annuum HOM05D000535 ORTHO05D011982 1.1e-07 61.2 192 29.7
PGSC0003DMG400009512 Solanum tuberosum HOM05D010028 ORTHO05D012080 1.5e-07 60.8 189 31.7
arahy.Tifrunner.gnm1.ann1.1J64TJ Arachis hypogaea HOM05D000535 ORTHO05D000427 1.9e-07 60.5 207 27.1
MSTRG.11530 Avicennia marina HOM05D000535 ORTHO05D000427 1.9e-07 60.5 185 33.0
Cc02_g29530 Coffea canephora HOM05D000535 ORTHO05D000427 1.9e-07 60.5 160 32.5
Medtr3g106585 Medicago truncatula HOM05D000535 ORTHO05D013302 4.3e-07 59.3 180 26.1
PGSC0003DMG400029534 Solanum tuberosum HOM05D000535 ORTHO05D000427 4.3e-07 59.3 236 27.5
ClCG02G016000 Citrullus lanatus HOM05D000535 ORTHO05D000427 5.6e-07 58.9 180 28.9
Cc00_g19300 Coffea canephora HOM05D000535 ORTHO05D000427 5.6e-07 58.9 164 29.3
Sed0013324 Sechium edule HOM05D000535 ORTHO05D000427 7.4e-07 58.5 188 28.7
BcaC08g46745 Brassica carinata HOM05D000535 ORTHO05D000427 9.6e-07 58.2 202 30.2
BolC6t39780H Brassica oleracea HOM05D000535 ORTHO05D000427 9.6e-07 58.2 204 30.9
COL.COLO4_16151 Corchorus olitorius HOM05D000535 ORTHO05D000427 9.6e-07 58.2 186 28.0
Cc00_g28720 Coffea canephora HOM05D000535 ORTHO05D000427 1.6e-06 57.4 164 28.7
Cc04_g08360 Coffea canephora HOM05D000535 ORTHO05D000427 1.6e-06 57.4 164 28.0
COL.COLO4_29947 Corchorus olitorius HOM05D000535 ORTHO05D000427 2.1e-06 57.0 189 27.5
Medtr7g108815 Medicago truncatula HOM05D000535 ORTHO05D000427 2.1e-06 57.0 186 25.8
C02p30960 Brassica napus HOM05D000535 ORTHO05D000427 3.6e-06 56.2 182 30.2
PGSC0003DMG400010133 Solanum tuberosum HOM05D013910 ORTHO05D396229 3.6e-06 56.2 46 52.2
Thecc.03G051300 Theobroma cacao HOM05D000535 ORTHO05D000427 4.8e-06 55.8 188 29.8
A07p39220 Brassica napus HOM05D000535 ORTHO05D000427 6.2e-06 55.5 179 29.1
BolC2t09143H Brassica oleracea HOM05D000535 ORTHO05D000427 6.2e-06 55.5 182 30.2
BraA07t31472Z Brassica rapa HOM05D000535 ORTHO05D000427 6.2e-06 55.5 179 29.1


User provided reference genes

Program Settings