Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010146 Solanum tuberosum HOM05D013910 ORTHO05D014685 9.5e-124 446.8 220 100.0
PGSC0003DMG400010143 Solanum tuberosum HOM05D013910 ORTHO05D014685 4.1e-111 404.8 223 91.5
PGSC0003DMG400010139 Solanum tuberosum HOM05D013910 ORTHO05D014685 1.7e-109 399.4 223 90.6
PGSC0003DMG400010137 Solanum tuberosum HOM05D013910 ORTHO05D014685 1.2e-94 350.1 223 80.3
PGSC0003DMG400010134 Solanum tuberosum HOM05D013910 ORTHO05D014685 1.2e-86 323.6 186 83.3
Sopen03g029410 Solanum pennellii HOM05D013910 ORTHO05D014685 3.8e-80 302.0 220 68.6
Solyc03g098700.1 Solanum lycopersicum HOM05D013910 ORTHO05D014685 2.5e-79 299.3 216 68.5
PGSC0003DMG400010147 Solanum tuberosum HOM05D013910 ORTHO05D014685 7.4e-60 234.6 223 55.6
PGSC0003DMG400010145 Solanum tuberosum HOM05D013910 ORTHO05D014685 2.5e-55 219.5 136 80.9
Nitab4.5_0016396g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 9.5e-31 137.9 232 44.0
PGSC0003DMG400010141 Solanum tuberosum HOM05D000535 ORTHO05D014685 3.8e-24 115.9 240 38.3
PGSC0003DMG400010136 Solanum tuberosum HOM05D000535 ORTHO05D014685 3.6e-22 109.4 243 36.6
Solyc03g098710.1 Solanum lycopersicum HOM05D000535 ORTHO05D014685 5.7e-20 102.1 236 35.2
Sopen03g029420 Solanum pennellii HOM05D000535 ORTHO05D014685 6.4e-19 98.6 244 34.8
PGSC0003DMG400010144 Solanum tuberosum HOM05D000535 ORTHO05D014685 6.6e-16 88.6 188 35.1
Nitab4.5_0000425g0210 Nicotiana tabacum HOM05D000535 ORTHO05D011982 2.5e-15 86.7 226 33.2
Peaxi162Scf00171g00131 Petunia axillaris HOM05D000535 ORTHO05D000427 2.5e-15 86.7 226 35.0
CAN.G1611.12 Capsicum annuum HOM05D010028 ORTHO05D012080 8.0e-14 81.6 225 34.7
Duzib268G0791 Durio zibethinus HOM05D000535 ORTHO05D000427 1.4e-13 80.9 226 31.0
PGSC0003DMG400015267 Solanum tuberosum HOM05D010028 ORTHO05D012080 1.4e-13 80.9 219 34.2
CAN.G1611.13 Capsicum annuum HOM05D010028 ORTHO05D012080 3.1e-13 79.7 225 35.6
Duzib268G1756 Durio zibethinus HOM05D000535 ORTHO05D000427 4.0e-13 79.3 226 30.5
Solyc03g098780.2 Solanum lycopersicum HOM05D010028 ORTHO05D012080 6.8e-13 78.6 224 32.1
Duzib205G1520 Durio zibethinus HOM05D000535 ORTHO05D000427 1.2e-12 77.8 192 33.9
Duzib268G0985 Durio zibethinus HOM05D000535 ORTHO05D000427 1.2e-12 77.8 237 29.5
Duzib268G1738 Durio zibethinus HOM05D000535 ORTHO05D000427 1.5e-12 77.4 237 29.5
PGSC0003DMG400008536 Solanum tuberosum HOM05D000535 ORTHO05D011982 1.5e-12 77.4 198 30.8
Duzib268G0452 Durio zibethinus HOM05D000535 ORTHO05D000427 2.0e-12 77.0 237 29.1
Duzib268G0986 Durio zibethinus HOM05D000535 ORTHO05D000427 2.0e-12 77.0 237 29.5
Nitab4.5_0001486g0010 Nicotiana tabacum HOM05D000535 ORTHO05D011982 2.0e-12 77.0 196 33.2
PGSC0003DMG400009513 Solanum tuberosum HOM05D010028 ORTHO05D012080 2.6e-12 76.6 215 31.2
PGSC0003DMG400010128 Solanum tuberosum HOM05D010028 ORTHO05D012080 4.4e-12 75.9 222 31.5
Sopen03g029520 Solanum pennellii HOM05D010028 ORTHO05D012080 1.3e-11 74.3 213 31.9
COL.COLO4_29947 Corchorus olitorius HOM05D000535 ORTHO05D000427 2.2e-11 73.6 192 31.2
Duzib268G1310 Durio zibethinus HOM05D000535 ORTHO05D000427 3.7e-11 72.8 237 29.1
PGSC0003DMG400009512 Solanum tuberosum HOM05D010028 ORTHO05D012080 6.4e-11 72.0 186 33.9
PGSC0003DMG400046234 Solanum tuberosum HOM05D000535 ORTHO05D011982 4.1e-10 69.3 186 30.6
PGSC0003DMG400008546 Solanum tuberosum HOM05D000535 ORTHO05D011982 5.4e-10 68.9 220 29.5
CAN.G929.3 Capsicum annuum HOM05D010028 ORTHO05D012080 1.6e-09 67.4 191 31.9
Solyc03g098790.3 Solanum lycopersicum HOM05D010028 ORTHO05D012080 1.6e-09 67.4 187 34.2
PGSC0003DMG400009511 Solanum tuberosum HOM05D010028 ORTHO05D012080 1.6e-09 67.4 223 30.9
MSTRG.10952 Avicennia marina HOM05D000535 ORTHO05D000427 7.8e-09 65.1 159 32.7
Thecc.03G051900 Theobroma cacao HOM05D000535 ORTHO05D000427 2.3e-08 63.5 238 28.6
Thecc.03G051600 Theobroma cacao HOM05D000535 ORTHO05D000427 3.0e-08 63.2 238 28.6
DCAR_011686 Daucus carota HOM05D000535 ORTHO05D000427 3.9e-08 62.8 234 29.9
PGSC0003DMG400010186 Solanum tuberosum HOM05D013910 ORTHO05D397379 6.6e-08 62.0 71 46.5
Nitab4.5_0000023g0480 Nicotiana tabacum HOM05D000535 ORTHO05D000427 1.1e-07 61.2 169 32.5
Duzib205G0258 Durio zibethinus HOM05D000535 ORTHO05D000427 1.6e-06 57.4 194 29.9
PGSC0003DMG400010133 Solanum tuberosum HOM05D013910 ORTHO05D396229 1.6e-06 57.4 62 45.2
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 2.1e-06 57.0 159 30.2
Dinv10702 Davidia involucrata HOM05D000535 ORTHO05D000427 2.1e-06 57.0 205 26.8
Gohir.A10G215000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 6.2e-06 55.5 154 33.1


User provided reference genes

Program Settings