Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010139 Solanum tuberosum HOM05D013910 ORTHO05D014685 3.0e-125 451.8 223 100.0
PGSC0003DMG400010143 Solanum tuberosum HOM05D013910 ORTHO05D014685 3.3e-124 448.4 223 99.1
PGSC0003DMG400010146 Solanum tuberosum HOM05D013910 ORTHO05D014685 3.0e-109 398.7 223 90.6
PGSC0003DMG400010137 Solanum tuberosum HOM05D013910 ORTHO05D014685 3.8e-96 355.1 223 80.3
PGSC0003DMG400010134 Solanum tuberosum HOM05D013910 ORTHO05D014685 1.2e-86 323.6 188 83.0
Sopen03g029410 Solanum pennellii HOM05D013910 ORTHO05D014685 1.3e-75 287.0 223 66.8
Solyc03g098700.1 Solanum lycopersicum HOM05D013910 ORTHO05D014685 2.9e-72 275.8 219 65.3
PGSC0003DMG400010147 Solanum tuberosum HOM05D013910 ORTHO05D014685 1.2e-60 237.3 225 57.8
PGSC0003DMG400010145 Solanum tuberosum HOM05D013910 ORTHO05D014685 3.4e-60 235.7 136 84.6
Nitab4.5_0016396g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 1.5e-31 140.6 234 43.6
PGSC0003DMG400010141 Solanum tuberosum HOM05D000535 ORTHO05D014685 1.0e-24 117.9 243 38.3
PGSC0003DMG400010136 Solanum tuberosum HOM05D000535 ORTHO05D014685 2.8e-22 109.8 244 37.3
Solyc03g098710.1 Solanum lycopersicum HOM05D000535 ORTHO05D014685 1.4e-18 97.4 234 35.9
Sopen03g029420 Solanum pennellii HOM05D000535 ORTHO05D014685 6.0e-17 92.0 241 35.3
PGSC0003DMG400010144 Solanum tuberosum HOM05D000535 ORTHO05D014685 8.7e-16 88.2 190 34.2
Duzib268G0986 Durio zibethinus HOM05D000535 ORTHO05D000427 5.6e-15 85.5 193 35.8
Duzib268G0452 Durio zibethinus HOM05D000535 ORTHO05D000427 9.6e-15 84.7 193 35.2
Peaxi162Scf00171g00131 Petunia axillaris HOM05D000535 ORTHO05D000427 3.7e-14 82.8 229 34.1
CAN.G1611.12 Capsicum annuum HOM05D010028 ORTHO05D012080 4.8e-14 82.4 228 36.4
Duzib268G0985 Durio zibethinus HOM05D000535 ORTHO05D000427 4.8e-14 82.4 193 34.7
Duzib268G1738 Durio zibethinus HOM05D000535 ORTHO05D000427 8.1e-14 81.6 193 34.7
Duzib268G0791 Durio zibethinus HOM05D000535 ORTHO05D000427 1.4e-13 80.9 229 31.9
PGSC0003DMG400015267 Solanum tuberosum HOM05D010028 ORTHO05D012080 5.3e-13 79.0 222 33.8
Duzib205G1520 Durio zibethinus HOM05D000535 ORTHO05D000427 6.9e-13 78.6 193 34.7
Duzib268G1756 Durio zibethinus HOM05D000535 ORTHO05D000427 6.9e-13 78.6 229 30.6
PGSC0003DMG400010128 Solanum tuberosum HOM05D010028 ORTHO05D012080 6.9e-13 78.6 225 32.9
CAN.G1611.13 Capsicum annuum HOM05D010028 ORTHO05D012080 1.2e-12 77.8 228 36.0
Duzib268G1310 Durio zibethinus HOM05D000535 ORTHO05D000427 1.5e-12 77.4 193 34.2
PGSC0003DMG400009513 Solanum tuberosum HOM05D010028 ORTHO05D012080 2.0e-12 77.0 225 33.8
COL.COLO4_29947 Corchorus olitorius HOM05D000535 ORTHO05D000427 1.3e-11 74.3 193 32.1
Solyc03g098780.2 Solanum lycopersicum HOM05D010028 ORTHO05D012080 1.3e-11 74.3 234 32.5
PGSC0003DMG400009512 Solanum tuberosum HOM05D010028 ORTHO05D012080 2.9e-11 73.2 189 34.4
Sopen03g029520 Solanum pennellii HOM05D010028 ORTHO05D012080 1.9e-10 70.5 216 31.9
MSTRG.10952 Avicennia marina HOM05D000535 ORTHO05D000427 3.2e-10 69.7 159 34.6
PGSC0003DMG400009511 Solanum tuberosum HOM05D010028 ORTHO05D012080 4.2e-10 69.3 226 32.3
Solyc03g098790.3 Solanum lycopersicum HOM05D010028 ORTHO05D012080 9.3e-10 68.2 225 30.2
Thecc.03G051900 Theobroma cacao HOM05D000535 ORTHO05D000427 1.6e-09 67.4 191 32.5
DCAR_011686 Daucus carota HOM05D000535 ORTHO05D000427 2.1e-09 67.0 174 33.3
Thecc.03G051600 Theobroma cacao HOM05D000535 ORTHO05D000427 2.1e-09 67.0 191 32.5
Duzib205G0258 Durio zibethinus HOM05D000535 ORTHO05D000427 2.7e-09 66.6 190 31.1
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 1.8e-08 63.9 176 34.1
CAN.G929.3 Capsicum annuum HOM05D010028 ORTHO05D012080 5.1e-08 62.4 186 30.6
MSTRG.11530 Avicennia marina HOM05D000535 ORTHO05D000427 3.3e-07 59.7 180 28.9
Dinv10702 Davidia involucrata HOM05D000535 ORTHO05D000427 3.3e-07 59.7 207 28.5
PGSC0003DMG400010186 Solanum tuberosum HOM05D013910 ORTHO05D397379 4.3e-07 59.3 60 48.3
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 5.7e-07 58.9 159 31.4
Nitab4.5_0000023g0480 Nicotiana tabacum HOM05D000535 ORTHO05D000427 1.6e-06 57.4 144 32.6
PGSC0003DMG400010133 Solanum tuberosum HOM05D013910 ORTHO05D396229 4.8e-06 55.8 62 45.2


User provided reference genes

Program Settings