Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 0.0e+00 2134.0 1088 100.0
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 0.0e+00 1764.2 1085 86.3
Solyc03g025150.4 Solanum lycopersicum HOM05D006627 ORTHO05D007753 0.0e+00 1763.0 1093 85.5
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 0.0e+00 1484.2 1090 73.6
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 0.0e+00 1200.7 1096 63.1
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 5.4e-212 742.3 1118 45.1
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 5.4e-135 486.5 1112 35.3
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 1.3e-120 438.7 1192 33.2
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.3e-104 385.6 1134 33.5
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 5.1e-101 373.6 1117 32.5
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 2.4e-98 364.8 1117 32.3
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 3.0e-85 321.2 1197 29.7
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 3.8e-80 304.3 1197 30.8
MSTRG.8718 Avicennia marina HOM05D006627 ORTHO05D007753 8.7e-77 293.1 1109 30.5
Migut.F00307 Erythranthe guttata HOM05D006627 ORTHO05D007753 3.8e-72 277.7 1128 30.7
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 3.3e-68 264.6 1152 28.2
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 9.0e-66 256.5 1083 29.7
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 9.0e-66 256.5 1083 29.7
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 5.5e-63 247.3 1123 28.9
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 1.0e-61 243.0 1118 28.4
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.5e-60 239.2 1119 29.1
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 1.3e-59 236.1 1113 29.1
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 2.2e-59 235.3 1125 28.3
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 6.1e-54 217.2 1083 27.4
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 9.7e-52 209.9 1105 28.1
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 6.9e-50 203.8 1351 24.9
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 1.2e-49 203.0 1130 26.4
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 3.6e-46 191.4 1172 26.5
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.8e-45 189.1 1355 24.4
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 8.8e-45 186.8 1320 26.0
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 2.0e-44 185.7 1175 24.9
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 9.7e-44 183.3 1159 26.0
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 6.3e-43 180.6 1123 24.8
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 1.2e-41 176.4 1217 24.2
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 1.3e-40 172.9 1139 26.5
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.2e-38 166.4 1204 25.8
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.6e-38 164.9 1110 26.3
DCAR_009389 Daucus carota HOM05D006627 ORTHO05D007753 4.7e-38 164.5 1152 25.6
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 2.6e-36 158.7 1241 25.3
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 3.3e-36 158.3 1298 24.7
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.3e-35 156.4 1299 23.8
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 2.2e-35 155.6 481 31.2
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 4.8e-35 154.5 1184 24.7
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.2e-35 153.7 1172 25.9
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 1.8e-34 152.5 1166 26.1
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 7.0e-34 150.6 1156 24.6
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 7.0e-34 150.6 317 37.5
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.6e-33 149.4 1172 26.3
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 3.5e-33 148.3 1172 24.9
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.9e-33 147.5 1165 26.7
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 1.0e-32 146.7 1173 25.4
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 1.0e-32 146.7 1173 25.4
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.3e-32 146.4 1166 26.1
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 1.1e-31 143.3 1101 25.4
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 2.5e-31 142.1 1097 25.0
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.5e-31 142.1 1174 25.9
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 3.2e-31 141.7 1101 25.3
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.2e-31 141.4 1158 25.9
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 5.5e-31 141.0 1152 25.4
unitig_46.g18802 Utricularia gibba HOM05D006627 ORTHO05D007753 2.7e-30 138.7 1113 24.3
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.8e-29 136.0 1151 25.4
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 2.2e-27 129.0 1097 25.6
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 6.3e-27 127.5 1280 23.4
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 1.4e-26 126.3 1107 23.8
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 1.6e-25 122.9 1221 23.9
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 7.7e-25 120.6 1231 24.2
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 1.1e-23 116.7 1388 23.5
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 4.2e-23 114.8 1253 23.5
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 1.8e-21 109.4 1273 23.3
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 3.0e-21 108.6 1121 24.8
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 5.2e-21 107.8 1109 23.7
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 1.2e-20 106.7 1190 24.6
Dinv35243 Davidia involucrata HOM05D006627 ORTHO05D007753 8.3e-19 100.5 552 25.7
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 4.1e-18 98.2 1184 23.6
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 5.4e-18 97.8 121 47.9
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 1.3e-16 93.2 1272 23.0
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 1.7e-16 92.8 1116 23.3
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.7e-16 92.8 1134 23.6
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.7e-16 92.8 1149 22.8
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 2.3e-16 92.4 1136 22.5
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 2.9e-16 92.0 1213 22.8
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 2.5e-15 89.0 1131 23.0
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 9.5e-15 87.0 1082 23.4
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 4.0e-13 81.6 715 22.7
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 6.8e-13 80.9 1195 22.5
unitig_747.g21861 Utricularia gibba HOM05D006627 ORTHO05D007753 5.7e-12 77.8 862 24.5
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 1.3e-11 76.6 1073 24.0
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 2.2e-11 75.9 1151 22.9
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 3.7e-11 75.1 846 22.6
Ah.07g206700 Amaranthus hybridus HOM05D006627 ORTHO05D007753 3.2e-10 72.0 206 31.6
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 5.4e-10 71.2 1279 22.6
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 5.4e-10 71.2 387 27.1
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 2.0e-09 69.3 1298 22.3
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 3.5e-09 68.6 460 25.4
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 6.6e-08 64.3 452 26.5
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 6.6e-08 64.3 1223 22.7
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 6.6e-08 64.3 1146 23.6
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 4.7e-06 58.2 355 26.2


User provided reference genes

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