Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 9.3e-53 209.9 104 100.0
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 6.6e-51 203.8 104 97.1
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 7.3e-50 200.3 104 94.2
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 3.6e-49 198.0 104 94.2
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 7.9e-44 180.3 89 97.8
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 2.5e-42 175.3 104 81.7
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 5.3e-32 141.0 103 66.0
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 2.6e-31 138.7 99 68.7
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 5.8e-31 137.5 97 68.0
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 7.6e-31 137.1 88 76.1
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.0e-30 136.7 101 67.3
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.0e-30 136.7 100 65.0
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 3.8e-30 134.8 103 60.2
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 3.8e-30 134.8 96 67.7
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 4.9e-30 134.4 101 67.3
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 4.9e-30 134.4 102 62.7
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 6.5e-30 134.0 104 64.4
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 8.4e-30 133.7 101 66.3
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 8.4e-30 133.7 101 66.3
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 8.4e-30 133.7 101 66.3
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 8.4e-30 133.7 103 63.1
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.1e-29 133.3 101 64.4
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.1e-29 133.3 100 65.0
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.4e-29 132.9 92 72.8
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 1.4e-29 132.9 100 64.0
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 1.4e-29 132.9 104 62.5
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 1.4e-29 132.9 103 64.1
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 1.9e-29 132.5 97 68.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.5e-29 132.1 104 63.5
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 2.5e-29 132.1 103 60.2
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 2.5e-29 132.1 103 67.0
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 2.5e-29 132.1 102 61.8
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 7.1e-29 130.6 100 67.0
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 7.1e-29 130.6 104 62.5
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 7.1e-29 130.6 63 98.4
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 9.3e-29 130.2 103 59.2
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 9.3e-29 130.2 95 68.4
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.6e-28 129.4 104 60.6
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 1.6e-28 129.4 87 74.7
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 1.6e-28 129.4 104 62.5
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 2.1e-28 129.0 87 69.0
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 2.7e-28 128.6 102 61.8
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 2.7e-28 128.6 98 65.3
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 3.5e-28 128.3 104 61.5
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 4.6e-28 127.9 102 62.7
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 4.6e-28 127.9 100 66.0
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 4.6e-28 127.9 93 65.6
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 4.6e-28 127.9 100 62.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 6.0e-28 127.5 104 60.6
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 7.9e-28 127.1 84 69.0
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.0e-27 126.7 101 62.4
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.3e-27 126.3 87 67.8
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 1.8e-27 125.9 83 68.7
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 2.3e-27 125.6 82 72.0
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 3.9e-27 124.8 95 64.2
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 3.9e-27 124.8 103 61.2
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 6.7e-27 124.0 90 67.8
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 6.7e-27 124.0 100 60.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 6.7e-27 124.0 100 60.0
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 6.7e-27 124.0 82 72.0
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 8.7e-27 123.6 83 72.3
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 8.7e-27 123.6 86 67.4
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 8.7e-27 123.6 90 65.6
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 1.1e-26 123.2 83 68.7
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 1.5e-26 122.9 100 63.0
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 1.5e-26 122.9 86 67.4
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 2.5e-26 122.1 88 64.8
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 3.3e-26 121.7 84 66.7
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 4.3e-26 121.3 89 66.3
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 5.7e-26 120.9 87 67.8
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 5.7e-26 120.9 82 68.3
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 5.7e-26 120.9 82 68.3
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 5.7e-26 120.9 82 70.7
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 2.8e-25 118.6 104 56.7
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 3.7e-25 118.2 86 65.1
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 8.2e-25 117.1 89 62.9
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 8.2e-25 117.1 103 53.4
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 1.1e-24 116.7 77 74.0
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 1.8e-24 115.9 80 67.5
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 3.1e-24 115.2 86 64.0
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 4.1e-24 114.8 97 56.7
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 4.1e-24 114.8 105 57.1
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 4.1e-24 114.8 80 66.2
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 5.3e-24 114.4 98 56.1
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.0e-22 110.2 96 56.2
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.7e-22 109.4 100 53.0
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 1.7e-22 109.4 100 53.0
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.7e-22 109.4 100 53.0
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.7e-22 109.4 100 53.0
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 1.7e-22 109.4 100 53.0
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 2.2e-22 109.0 87 57.5
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 6.5e-22 107.5 100 53.0
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 6.5e-22 107.5 87 56.3
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 6.5e-22 107.5 91 60.4
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 8.4e-22 107.1 83 60.2
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 8.4e-22 107.1 96 53.1
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 8.4e-22 107.1 97 51.5
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 1.1e-21 106.7 86 55.8
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 1.4e-21 106.3 81 64.2
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 7.2e-21 104.0 82 56.1
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 9.3e-21 103.6 96 51.0
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 9.3e-21 103.6 83 56.6
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 9.3e-21 103.6 107 45.8
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 3.0e-19 98.6 88 47.7
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 6.7e-19 97.4 88 46.6
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 4.3e-18 94.7 103 48.5
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 3.7e-17 91.7 81 46.9
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 4.1e-16 88.2 106 41.5
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 8.5e-14 80.5 87 43.7
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 1.4e-11 73.2 84 40.5
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.1e-10 70.1 73 43.8
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 9.7e-10 67.0 82 35.4
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 1.1e-08 63.5 84 40.5
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 3.1e-08 62.0 80 36.2


User provided reference genes

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