Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009945 Solanum tuberosum HOM05D008706 ORTHO05D010440 4.1e-184 647.9 321 100.0
PGSC0003DMG400009944 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.3e-118 430.3 324 68.8
PGSC0003DMG400009874 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.4e-99 367.1 324 62.7
Nitab4.5_0001201g0040 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.3e-73 280.8 353 46.7
Sopen01g043690 Solanum pennellii HOM05D008706 ORTHO05D010440 2.1e-71 273.5 329 46.8
Sopen01g043720 Solanum pennellii HOM05D008706 ORTHO05D010440 2.1e-71 273.5 329 46.8
PGSC0003DMG400024780 Solanum tuberosum HOM05D008706 ORTHO05D010440 6.1e-71 271.9 326 46.9
Nitab4.5_0008157g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.5e-69 267.3 318 48.7
Nitab4.5_0002715g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.0e-69 266.9 348 47.1
Peaxi162Scf00347g00087 Petunia axillaris HOM05D008706 ORTHO05D010440 3.1e-67 259.6 314 49.0
Nitab4.5_0002715g0100 Nicotiana tabacum HOM05D008706 ORTHO05D010440 1.0e-65 254.6 310 49.4
Nitab4.5_0001201g0090 Nicotiana tabacum HOM05D008706 ORTHO05D010440 5.4e-59 232.3 347 42.7
PGSC0003DMG400037185 Solanum tuberosum HOM05D008706 ORTHO05D010440 2.6e-53 213.4 346 41.0
PGSC0003DMG400008068 Solanum tuberosum HOM05D008706 ORTHO05D010440 9.8e-53 211.5 299 43.1
Nitab4.5_0000368g0410 Nicotiana tabacum HOM05D008706 ORTHO05D010440 2.9e-52 209.9 299 43.1
Peaxi162Scf01164g00027 Petunia axillaris HOM05D008706 ORTHO05D010440 1.4e-51 207.6 299 44.8
PGSC0003DMG400037851 Solanum tuberosum HOM05D008706 ORTHO05D010440 9.2e-51 204.9 342 39.2
Peaxi162Scf00136g00622 Petunia axillaris HOM05D008706 ORTHO05D010440 1.2e-50 204.5 284 44.0
Sopen12g023140 Solanum pennellii HOM05D008706 ORTHO05D010440 2.3e-49 200.3 309 42.1
Solyc12g044775.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 5.0e-49 199.1 309 42.1
Sopen12g023120 Solanum pennellii HOM05D008706 ORTHO05D010440 8.6e-49 198.4 309 42.1
Peaxi162Scf01164g10021 Petunia axillaris HOM05D008706 ORTHO05D010440 2.5e-48 196.8 303 41.9
Sopen12g023130 Solanum pennellii HOM05D008706 ORTHO05D010440 3.3e-48 196.4 344 39.5
Solyc12g044780.2 Solanum lycopersicum HOM05D008706 ORTHO05D010440 3.4e-45 186.4 309 40.5
Solyc12g044790.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 1.7e-44 184.1 309 40.1
Peaxi162Scf00073g00111 Petunia axillaris HOM05D008706 ORTHO05D010440 6.4e-44 182.2 290 41.4
PGSC0003DMG400008116 Solanum tuberosum HOM05D008706 ORTHO05D010440 7.1e-43 178.7 292 40.8
CAN.G546.3 Capsicum annuum HOM05D008706 ORTHO05D010440 3.9e-41 172.9 292 39.7
PGSC0003DMG400022280 Solanum tuberosum HOM05D008706 ORTHO05D010440 1.4e-38 164.5 315 36.2
CAN.G1476.3 Capsicum annuum HOM05D008706 ORTHO05D010440 1.4e-35 154.5 306 37.3
CAN.G546.5 Capsicum annuum HOM05D008706 ORTHO05D010440 3.0e-33 146.7 254 40.9
Peaxi162Scf00105g00614 Petunia axillaris HOM05D008706 ORTHO05D010440 3.0e-33 146.7 223 39.5
Solyc11g069120.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 7.3e-32 142.1 252 41.7
Peaxi162Scf01026g00232 Petunia axillaris HOM05D008706 ORTHO05D010440 4.0e-30 136.3 276 37.0
CAN.G396.6 Capsicum annuum HOM05D008706 ORTHO05D010440 2.0e-29 134.0 175 45.7
Nitab4.5_0003349g0020 Nicotiana tabacum HOM05D008706 ORTHO05D010440 4.4e-29 132.9 130 58.5
PGSC0003DMG400039069 Solanum tuberosum HOM05D008706 ORTHO05D010440 5.8e-29 132.5 116 53.4
Nitab4.5_0006875g0050 Nicotiana tabacum HOM05D008706 ORTHO05D010440 6.9e-22 109.0 150 48.0
Duzib177G0763 Durio zibethinus HOM05D007779 ORTHO05D009863 3.9e-17 93.2 301 27.2
Thecc.05G277100 Theobroma cacao HOM05D007779 ORTHO05D009863 9.6e-16 88.6 296 26.7
Sopen11g027850 Solanum pennellii HOM05D008706 ORTHO05D010440 8.1e-15 85.5 126 41.3
COL.COLO4_15414 Corchorus olitorius HOM05D007779 ORTHO05D009863 1.2e-13 81.6 283 28.6
Actinidia26989 Actinidia chinensis HOM05D007779 ORTHO05D010440 2.0e-13 80.9 282 26.2
TWI56G0837 Tripterygium wilfordii HOM05D007779 ORTHO05D009863 4.5e-13 79.7 292 26.7
Sopen12g023150 Solanum pennellii HOM05D008706 ORTHO05D010440 7.6e-13 79.0 207 30.4
CARHR209310 Cardamine hirsuta HOM05D007779 ORTHO05D009863 8.4e-12 75.5 186 31.2
Sed0013342 Sechium edule HOM05D021455 ORTHO05D010440 1.1e-11 75.1 270 25.2
Ciclev10019572m.g Citrus clementina HOM05D007779 ORTHO05D009863 3.2e-11 73.6 297 24.6
QL03p029097 Quercus lobata HOM05D007779 ORTHO05D009863 3.2e-11 73.6 287 26.8
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 7.1e-11 72.4 283 25.4
BcaB05g21790 Brassica carinata HOM05D007779 ORTHO05D009863 9.3e-11 72.0 195 32.8
Atru.chr2.884 Acer truncatum HOM05D007779 ORTHO05D009863 1.2e-10 71.6 302 24.2
AT5G03970 Arabidopsis thaliana HOM05D007779 ORTHO05D009863 4.6e-10 69.7 275 25.1
THA.LOC104805831 Tarenaya hassleriana HOM05D007779 ORTHO05D009863 7.9e-10 68.9 187 32.6
Carub.0006s0291 Capsella rubella HOM05D007779 ORTHO05D009863 2.3e-09 67.4 186 30.1
Cpa.g.sc162.10 Carica papaya HOM05D007779 ORTHO05D009863 3.0e-09 67.0 230 29.1
CiPaw.07G070500 Carya illinoinensis HOM05D007779 ORTHO05D009863 3.0e-09 67.0 314 24.5
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 3.9e-09 66.6 294 23.8
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.9e-08 64.3 285 24.6
Aa31LG1G21350 Aethionema arabicum HOM05D007779 ORTHO05D009863 4.3e-08 63.2 212 27.8
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 1.6e-07 61.2 283 24.7
Lsat_1_v5_gn_5_30901 Lactuca sativa HOM05D001729 ORTHO05D001155 1.6e-07 61.2 297 25.6
COL.COLO4_34020 Corchorus olitorius HOM05D001729 ORTHO05D001155 2.1e-07 60.8 296 26.4
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 2.1e-07 60.8 317 21.8
Haze_04390 Corylus avellana HOM05D007779 ORTHO05D009863 3.7e-07 60.1 288 23.3
HanXRQChr04g0121411 Helianthus annuus HOM05D001729 ORTHO05D001155 3.7e-07 60.1 270 25.6
Aqoxy1G00049 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 4.8e-07 59.7 280 23.2
Duzib106G0954 Durio zibethinus HOM05D007779 ORTHO05D009863 1.1e-06 58.5 192 30.7
Medtr8g102000 Medicago truncatula HOM05D012242 ORTHO05D001155 1.1e-06 58.5 200 25.0
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 1.1e-06 58.5 270 21.9
PSO161G0051 Papaver somniferum HOM05D008326 ORTHO05D001155 1.1e-06 58.5 195 28.7
PSO541G4811 Papaver somniferum HOM05D008326 ORTHO05D001155 1.4e-06 58.2 222 24.3
A09p54400 Brassica napus HOM05D007779 ORTHO05D009863 4.0e-06 56.6 205 25.9
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 4.0e-06 56.6 283 24.0
BraA09t40853Z Brassica rapa HOM05D007779 ORTHO05D009863 9.0e-06 55.5 205 26.3
PSO210G5868 Papaver somniferum HOM05D008326 ORTHO05D001155 9.0e-06 55.5 139 26.6


User provided reference genes

Program Settings