Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009890 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.5e-28 127.9 56 100.0
CAN.G311.85 Capsicum annuum HOM05D000151 ORTHO05D000074 3.3e-20 100.9 49 87.8
Nitab4.5_0003280g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 7.3e-20 99.8 49 85.7
PGSC0003DMG400009960 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.0e-19 96.3 49 83.7
Sopen04g035710 Solanum pennellii HOM05D000151 ORTHO05D000074 1.0e-18 95.9 49 83.7
Solyc04g082060.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.5e-17 92.0 47 83.0
Peaxi162Scf00174g01118 Petunia axillaris HOM05D000151 ORTHO05D000074 5.8e-17 90.1 48 77.1
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 4.1e-15 84.0 49 73.5
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.1e-12 75.9 48 68.8
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.9e-12 75.1 50 64.0
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 2.5e-12 74.7 49 63.3
Duzib116G0495 Durio zibethinus HOM05D000151 ORTHO05D000074 2.1e-11 71.6 50 62.0
Potri.002G014500 Populus trichocarpa HOM05D000151 ORTHO05D000074 2.8e-11 71.2 47 61.7
Sabra02G0011500 Salix brachista HOM05D000151 ORTHO05D000074 6.2e-11 70.1 49 61.2
COL.COLO4_26063 Corchorus olitorius HOM05D000151 ORTHO05D000074 8.0e-11 69.7 50 60.0
HanXRQChr05g0145731 Helianthus annuus HOM05D000151 ORTHO05D000074 1.4e-10 68.9 44 65.9
Thecc.08G054100 Theobroma cacao HOM05D000151 ORTHO05D000074 1.8e-10 68.6 50 60.0
Gohir.A06G000900 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.1e-10 67.8 50 56.0
Atru.chr13.193 Acer truncatum HOM05D000151 ORTHO05D000074 5.2e-10 67.0 49 59.2
Gorai.010G001100 Gossypium raimondii HOM05D000151 ORTHO05D000074 8.9e-10 66.2 50 56.0
HanXRQChr02g0042691 Helianthus annuus HOM05D000151 ORTHO05D000074 1.5e-09 65.5 44 61.4
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 1.5e-09 65.5 44 61.4
ECA232G2391 Erigeron canadensis HOM05D000151 ORTHO05D000074 2.0e-09 65.1 44 61.4
Lsat_1_v5_gn_2_5520 Lactuca sativa HOM05D000151 ORTHO05D000074 3.4e-09 64.3 44 59.1
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 4.4e-09 63.9 48 60.4
QL02p013380 Quercus lobata HOM05D000151 ORTHO05D000074 9.8e-09 62.8 49 57.1
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.7e-08 62.0 48 60.4
Lalb_Chr23g0265911 Lupinus albus HOM05D000151 ORTHO05D000074 2.9e-08 61.2 48 56.2
arahy.Tifrunner.gnm1.ann1.PYC0TU Arachis hypogaea HOM05D000151 ORTHO05D000074 3.7e-08 60.8 47 57.4
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 8.3e-08 59.7 50 56.0
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.9e-07 58.5 49 61.2
Lsat_1_v5_gn_9_46700 Lactuca sativa HOM05D000151 ORTHO05D000074 5.4e-07 57.0 44 56.8
Psat0s4081g0040 Pisum sativum HOM05D000151 ORTHO05D000074 1.6e-06 55.5 51 51.0
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.7e-06 54.7 47 48.9


User provided reference genes

Program Settings