Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009654 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-197 690.6 342 100.0
PGSC0003DMG400037995 Solanum tuberosum HOM05D008541 ORTHO05D010458 5.0e-71 272.3 177 82.5
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-53 214.5 190 55.3
Solyc12g035300.1 Solanum lycopersicum HOM05D008541 ORTHO05D010458 2.9e-47 193.4 149 67.1
Sopen02g008250 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-46 189.9 139 67.6
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 2.3e-44 183.7 243 42.8
Peaxi162Scf00107g00021 Petunia axillaris HOM05D008541 ORTHO05D010458 2.6e-43 180.3 277 42.2
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 8.3e-42 175.3 178 49.4
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-39 167.5 169 53.3
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.6e-39 165.2 323 38.4
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-37 159.8 327 35.8
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.5e-35 152.1 178 42.7
Sopen08g014600 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-33 148.3 99 72.7
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-32 144.1 152 47.4
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-30 137.5 191 38.7
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 7.3e-30 135.6 159 49.7
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 9.5e-30 135.2 180 44.4
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 1.6e-29 134.4 193 37.8
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-29 134.0 211 36.0
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-29 133.7 217 37.3
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.6e-29 133.3 188 41.0
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 4.7e-29 132.9 251 32.7
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.1e-28 131.7 127 55.1
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-28 131.3 173 39.9
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 3.1e-28 130.2 174 42.5
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 4.0e-28 129.8 250 32.8
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 5.2e-28 129.4 189 38.6
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 2.6e-27 127.1 243 32.9
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 3.4e-27 126.7 157 44.6
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 7.5e-27 125.6 224 32.6
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.2e-26 124.0 79 74.7
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-26 123.6 199 35.7
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 1.1e-25 121.7 86 67.4
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 1.4e-25 121.3 171 38.0
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 3.2e-25 120.2 199 34.7
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 7.1e-25 119.0 189 37.6
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-24 117.5 232 32.3
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 3.5e-24 116.7 137 44.5
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.5e-24 116.7 137 48.9
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-24 116.3 77 70.1
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 7.8e-24 115.5 241 32.0
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.8e-24 115.5 163 38.7
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.8e-24 115.5 137 48.9
Peaxi162Scf00962g00310 Petunia axillaris HOM05D008541 ORTHO05D010458 1.7e-23 114.4 229 36.7
Peaxi162Scf00272g00044 Petunia axillaris HOM05D003888 ORTHO05D007163 3.9e-23 113.2 195 41.5
EL10Ac6g14504 Beta vulgaris HOM05D000107 ORTHO05D007163 5.1e-23 112.8 221 35.3
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-22 111.7 333 33.0
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 1.9e-22 110.9 241 30.7
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-22 110.9 169 37.9
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-22 110.5 176 36.4
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 5.6e-22 109.4 169 37.9
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 9.5e-22 108.6 169 38.5
Sopen09g013320 Solanum pennellii HOM05D003888 ORTHO05D007163 9.5e-22 108.6 101 54.5
Sopen07g007210 Solanum pennellii HOM05D003888 ORTHO05D007163 1.2e-21 108.2 57 84.2
Solyc01g014050.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.6e-21 107.8 74 68.9
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 2.1e-21 107.5 178 34.3
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.8e-21 107.1 112 50.0
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 3.6e-21 106.7 77 59.7
Sopen04g019130 Solanum pennellii HOM05D003888 ORTHO05D007163 3.6e-21 106.7 74 71.6
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.6e-21 106.7 77 61.0
Peaxi162Scf00529g00022 Petunia axillaris HOM05D003888 ORTHO05D007163 6.2e-21 105.9 68 73.5
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.1e-20 105.1 210 31.4
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.8e-20 104.4 141 36.9
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.8e-20 104.4 135 45.9
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.4e-20 104.0 77 66.2
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 3.1e-20 103.6 155 36.8
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.0e-20 103.2 178 32.6
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.8e-20 102.4 235 33.2
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 2.6e-19 100.5 77 53.2
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.4e-19 100.1 65 72.3
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.7e-18 97.8 170 35.3
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 1.7e-18 97.8 110 46.4
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-18 97.4 167 35.3
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-18 97.4 106 45.3
Solyc07g026865.1 Solanum lycopersicum HOM05D008541 ORTHO05D010458 1.1e-17 95.1 65 76.9
PGSC0003DMG400016021 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-17 94.4 150 38.7
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-17 94.4 77 53.2
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.4e-17 94.0 272 27.9
Nitab4.5_0001375g0180 Nicotiana tabacum HOM05D003888 ORTHO05D007163 5.4e-17 92.8 130 43.8
PGSC0003DMG400040445 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-17 92.4 71 59.2
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 9.2e-17 92.0 77 54.5
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 1.2e-16 91.7 175 33.7
PGSC0003DMG400034991 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-16 90.9 78 52.6
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 6.0e-16 89.4 76 55.3
AUR62037452 Chenopodium quinoa HOM05D000039 ORTHO05D007163 1.7e-15 87.8 162 33.3
Nitab4.5_0009666g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.7e-15 87.8 98 49.0
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.7e-15 87.8 65 66.2
PGSC0003DMG400020859 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.7e-15 85.5 78 51.3
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 1.1e-14 85.1 77 45.5
Nitab4.5_0003260g0040 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.1e-14 85.1 96 47.9
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-14 85.1 43 90.7
Nitab4.5_0005404g0040 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.5e-14 84.7 101 46.5
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-14 84.3 63 61.9
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 2.5e-14 84.0 210 28.6
Nitab4.5_0000757g0110 Nicotiana tabacum HOM05D008541 ORTHO05D010458 5.6e-14 82.8 98 45.9
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.6e-14 82.8 138 32.6
Nitab4.5_0005324g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 9.6e-14 82.0 101 45.5
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.6e-14 82.0 65 56.9
PGSC0003DMG400030290 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.6e-14 82.0 72 51.4
Nitab4.5_0000970g0140 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.2e-13 81.6 101 45.5
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 1.6e-13 81.3 241 25.7
Nitab4.5_0001258g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 4.7e-13 79.7 98 44.9
Nitab4.5_0012868g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 4.7e-13 79.7 98 45.9
Nitab4.5_0000285g0050 Nicotiana tabacum HOM05D008541 ORTHO05D010458 6.2e-13 79.3 98 43.9
Nitab4.5_0000037g0270 Nicotiana tabacum HOM05D008541 ORTHO05D010458 8.1e-13 79.0 98 45.9
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-12 78.6 119 40.3
Nitab4.5_0000409g0140 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.1e-12 78.6 147 38.8
Sopen07g014650 Solanum pennellii HOM05D008541 ORTHO05D010458 1.1e-12 78.6 72 59.7
Nitab4.5_0001251g0020 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.8e-12 77.8 104 43.3
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 3.1e-12 77.0 158 30.4
Peaxi162Scf00735g00052 Petunia axillaris HOM05D008541 ORTHO05D010458 3.1e-12 77.0 85 52.9
PGSC0003DMG400005532 Solanum tuberosum HOM05D000021 ORTHO05D007163 3.1e-12 77.0 58 56.9
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-12 77.0 45 77.8
Nitab4.5_0003833g0060 Nicotiana tabacum HOM05D011142 ORTHO05D010458 6.9e-12 75.9 162 37.7
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-11 74.3 77 44.2
PGSC0003DMG400015985 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.6e-11 73.9 66 56.1
Peaxi162Scf00010g00197 Petunia axillaris HOM05D003888 ORTHO05D007163 4.4e-11 73.2 45 71.1
Nitab4.5_0002703g0040 Nicotiana tabacum HOM05D008541 ORTHO05D010458 9.9e-11 72.0 81 45.7
Nitab4.5_0000056g0130 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.3e-10 71.6 94 43.6
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-10 71.2 54 53.7
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-10 70.9 43 74.4
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-10 70.5 47 63.8
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.9e-10 70.5 43 74.4
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.8e-10 70.1 143 32.2
Peaxi162Scf00033g00005 Petunia axillaris HOM05D003888 ORTHO05D007163 4.9e-10 69.7 63 57.1
Nitab4.5_0002140g0030 Nicotiana tabacum HOM05D008541 ORTHO05D010458 6.4e-10 69.3 81 49.4
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.4e-10 68.9 305 28.9
Nitab4.5_0001208g0180 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.1e-09 68.6 94 43.6
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.1e-09 68.6 76 40.8
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-09 67.8 123 35.0
Solyc09g057900.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-09 67.4 59 49.2
EL10Ac2g03390 Beta vulgaris HOM05D003888 ORTHO05D007163 3.2e-09 67.0 100 36.0
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.2e-09 66.6 46 63.0
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 5.4e-09 66.2 117 38.5
Nitab4.5_0002338g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 9.3e-09 65.5 88 42.0
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-08 65.1 167 26.9
EL10Ac2g03866 Beta vulgaris HOM05D000107 ORTHO05D007163 1.6e-08 64.7 198 26.8
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 2.7e-08 63.9 44 59.1
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.7e-08 63.9 98 35.7
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 6.0e-08 62.8 50 48.0
Nitab4.5_0003420g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.3e-07 61.6 81 40.7
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.3e-07 61.6 44 56.8
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-07 60.5 112 31.2
Peaxi162Scf00602g00110 Petunia axillaris HOM05D003888 ORTHO05D007163 3.0e-07 60.5 69 49.3
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 3.0e-07 60.5 176 26.1
Nitab4.5_0001012g0030 Nicotiana tabacum HOM05D008541 ORTHO05D010458 5.1e-07 59.7 70 45.7
Nitab4.5_0000178g0010 Nicotiana tabacum HOM05D011142 ORTHO05D010458 6.6e-07 59.3 78 42.3
Nitab4.5_0001528g0020 Nicotiana tabacum HOM05D011142 ORTHO05D010458 6.6e-07 59.3 176 32.4
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 6.6e-07 59.3 38 71.1
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.6e-07 59.3 62 41.9
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 6.6e-07 59.3 44 56.8
TWI59G0531 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 6.6e-07 59.3 169 32.0
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 8.7e-07 58.9 213 26.3
AUR62024081 Chenopodium quinoa HOM05D003888 ORTHO05D003213 8.7e-07 58.9 80 38.8
Solyc10g052810.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.7e-07 58.9 53 49.1
Nitab4.5_0006746g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 1.1e-06 58.5 152 34.9
PGSC0003DMG400009784 Solanum tuberosum HOM05D003888 ORTHO05D051315 1.5e-06 58.2 39 59.0
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.5e-06 58.2 169 30.8
MD15G1435100 Malus domestica HOM05D008595 ORTHO05D000669 1.9e-06 57.8 169 26.0
SalBow5G4417 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.9e-06 57.8 54 51.9
Nitab4.5_0001167g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 2.5e-06 57.4 109 37.6
Nitab4.5_0003996g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 2.5e-06 57.4 99 36.4
Nitab4.5_0004096g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 2.5e-06 57.4 188 30.9
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.5e-06 57.4 44 54.5
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.5e-06 57.4 56 44.6
Nitab4.5_0004804g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 3.3e-06 57.0 99 36.4
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.3e-06 57.0 44 54.5
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 4.3e-06 56.6 188 28.7
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 4.3e-06 56.6 188 28.7
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 4.3e-06 56.6 39 56.4
EL10As3g23351 Beta vulgaris HOM05D008455 ORTHO05D009597 5.6e-06 56.2 198 23.7
AUR62040068 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.6e-06 56.2 75 38.7
Nitab4.5_0006097g0020 Nicotiana tabacum HOM05D008541 ORTHO05D010458 5.6e-06 56.2 114 33.3
AUR62032094 Chenopodium quinoa HOM05D000107 ORTHO05D011649 7.3e-06 55.8 81 42.0
Nitab4.5_0002661g0090 Nicotiana tabacum HOM05D011142 ORTHO05D010458 7.3e-06 55.8 90 40.0
Nitab4.5_0004671g0010 Nicotiana tabacum HOM05D008541 ORTHO05D010458 9.6e-06 55.5 101 39.6


User provided reference genes

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