Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009608 Solanum tuberosum HOM05D014842 ORTHO05D010514 1.7e-108 396.0 197 100.0
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 2.3e-108 395.6 196 100.0
Sopen05g012710 Solanum pennellii HOM05D008696 ORTHO05D010514 9.9e-72 273.9 134 98.5
Sed0012925 Sechium edule HOM05D002660 ORTHO05D003902 7.4e-43 177.9 182 50.0
Gorai.001G160300 Gossypium raimondii HOM05D014842 ORTHO05D010514 5.5e-30 135.2 149 46.3
Gohir.A06G098102 Gossypium hirsutum HOM05D008696 ORTHO05D010514 1.5e-27 127.1 146 44.5
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.3e-26 124.0 173 42.8
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 2.8e-26 122.9 172 41.3
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.7e-23 113.6 162 40.7
arahy.Tifrunner.gnm1.ann1.K1N0C3 Arachis hypogaea HOM05D014842 ORTHO05D010514 1.0e-20 104.4 157 39.5
arahy.Tifrunner.gnm1.ann1.RHJW1F Arachis hypogaea HOM05D014842 ORTHO05D010514 1.0e-20 104.4 157 39.5
SabraMtG0003800 Salix brachista HOM05D023423 ORTHO05D010514 2.6e-19 99.8 131 40.5
CAN.G802.5 Capsicum annuum HOM05D001109 ORTHO05D001051 1.1e-17 94.4 55 74.5
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 2.9e-15 86.3 189 32.3
Ca_17158_v3 Cicer arietinum L. HOM05D014842 ORTHO05D010514 5.0e-15 85.5 183 31.7
CDE02G1301 Ceratophyllum demersum HOM05D000806 ORTHO05D002320 3.2e-14 82.8 114 38.6
VMungo0952G0001 Vigna mungo HOM05D014842 ORTHO05D010514 1.6e-13 80.5 110 45.5
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 4.7e-13 79.0 121 34.7
MBI14_g44093_MAGBIO Magnolia biondii HOM05D053244 ORTHO05D010514 1.4e-12 77.4 130 32.3
Psat4g178240 Pisum sativum HOM05D014842 ORTHO05D010514 3.9e-12 75.9 87 51.7
arahy.Tifrunner.gnm1.ann1.M5G7Z1 Arachis hypogaea HOM05D008696 ORTHO05D010514 8.8e-12 74.7 136 37.5
arahy.Tifrunner.gnm1.ann1.9V24TL Arachis hypogaea HOM05D008696 ORTHO05D010514 2.0e-11 73.6 114 40.4
arahy.Tifrunner.gnm1.ann1.T3VZS7 Arachis hypogaea HOM05D008696 ORTHO05D010514 2.0e-11 73.6 114 40.4
arahy.Tifrunner.gnm1.ann1.D6L4V6 Arachis hypogaea HOM05D008696 ORTHO05D010514 2.6e-11 73.2 114 39.5
arahy.Tifrunner.gnm1.ann1.Z6EYTT Arachis hypogaea HOM05D008696 ORTHO05D010514 3.3e-11 72.8 130 37.7
Cfa021368 Carpinus fangiana HOM05D014842 ORTHO05D010514 5.7e-11 72.0 113 33.6
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.8e-10 69.7 34 82.4
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.8e-10 69.7 34 82.4
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.8e-10 69.7 34 82.4
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.8e-10 69.7 34 82.4
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 2.8e-10 69.7 34 82.4
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 2.8e-10 69.7 34 82.4
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 3.1e-09 66.2 155 32.9
Psat0s3560g0080 Pisum sativum HOM05D000533 ORTHO05D002807 5.9e-08 62.0 131 37.4
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 7.7e-08 61.6 72 41.7
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 7.7e-08 61.6 72 41.7
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 7.7e-08 61.6 72 41.7
Potri.007G061741 Populus trichocarpa HOM05D023423 ORTHO05D010514 1.0e-07 61.2 90 32.2
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.3e-07 60.8 44 68.2
Psat0s1002g0040 Pisum sativum HOM05D008696 ORTHO05D010514 2.2e-07 60.1 60 50.0
SGA_v2.0_scaffold575G52999 Striga asiatica HOM05D014842 ORTHO05D010514 3.8e-07 59.3 71 47.9
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 5.0e-07 58.9 70 41.4
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 5.0e-07 58.9 67 41.8
Ca_03778_v3 Cicer arietinum L. HOM05D008696 ORTHO05D002807 2.5e-06 56.6 92 37.0
Lalb_Chr00c29g0407851 Lupinus albus HOM05D043230 ORTHO05D038884 5.5e-06 55.5 57 38.6


User provided reference genes

Program Settings