Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 1.5e-218 762.7 417 100.0
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 6.3e-185 651.0 417 87.8
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 2.6e-178 629.0 417 85.6
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 5.0e-150 535.0 436 72.0
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 6.8e-139 498.0 392 75.8
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 9.9e-130 467.6 444 65.3
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 1.2e-122 444.1 444 63.3
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 4.8e-68 262.7 433 44.3
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 7.2e-56 222.2 436 40.4
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 9.4e-56 221.9 469 39.7
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 2.7e-55 220.3 440 40.5
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 5.7e-53 212.6 483 37.7
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 2.2e-52 210.7 429 39.6
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.8e-52 210.3 479 37.2
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 3.7e-52 209.9 487 37.8
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 9.1e-51 205.3 435 36.6
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 1.2e-50 204.9 436 38.1
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 2.0e-50 204.1 450 36.7
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 6.5e-49 199.1 452 37.8
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 8.6e-49 198.7 484 33.9
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 3.2e-48 196.8 482 36.5
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.1e-47 194.1 456 39.3
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 4.7e-47 193.0 448 36.6
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 6.1e-47 192.6 313 45.0
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 1.0e-46 191.8 433 37.9
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 1.4e-46 191.4 457 37.0
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 2.3e-46 190.7 458 35.2
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 2.3e-46 190.7 447 37.1
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 4.0e-46 189.9 436 37.2
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 6.8e-46 189.1 452 35.6
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 6.8e-46 189.1 431 38.5
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 1.5e-45 188.0 480 34.8
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 5.7e-45 186.0 433 37.9
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 9.8e-45 185.3 450 36.4
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 1.7e-44 184.5 442 37.3
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 8.3e-44 182.2 452 36.1
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 1.8e-43 181.0 470 34.9
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.8e-43 181.0 430 36.3
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 2.4e-43 180.6 440 35.5
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 7.0e-43 179.1 469 35.4
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 9.2e-43 178.7 457 34.8
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.6e-42 177.9 454 35.0
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 2.7e-42 177.2 438 36.5
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 4.5e-42 176.4 439 34.4
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 1.0e-41 175.3 441 37.2
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 1.3e-41 174.9 438 37.4
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 1.7e-41 174.5 435 35.6
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 2.9e-41 173.7 429 33.8
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 6.6e-41 172.6 450 33.8
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 8.6e-41 172.2 455 33.4
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 1.1e-40 171.8 445 34.8
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 7.3e-40 169.1 200 51.5
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.2e-39 168.3 454 33.0
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.8e-39 167.2 442 37.1
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 6.1e-39 166.0 447 33.6
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 6.1e-39 166.0 458 34.5
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 8.0e-39 165.6 452 34.7
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 1.0e-38 165.2 442 37.1
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.0e-38 165.2 437 37.8
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 1.0e-38 165.2 501 32.1
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 4.0e-38 163.3 444 34.7
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.8e-38 162.5 437 36.6
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 2.0e-37 161.0 455 33.0
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 6.4e-36 156.0 449 34.1
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 6.4e-36 156.0 439 35.5
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 1.4e-35 154.8 425 36.0
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 2.4e-35 154.1 429 34.0
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.4e-35 154.1 429 34.0
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 2.4e-35 154.1 475 31.8
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 5.4e-35 152.9 430 34.2
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 4.6e-34 149.8 443 33.0
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.0e-33 148.7 460 32.0
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.7e-33 147.9 432 33.1
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 3.0e-33 147.1 432 31.2
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 6.6e-33 146.0 423 34.5
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.9e-32 144.4 423 33.8
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 1.9e-32 144.4 289 40.5
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 7.3e-32 142.5 423 33.6
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.6e-31 141.4 438 30.8
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 2.8e-31 140.6 436 31.4
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.0e-30 136.7 447 32.0
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.0e-30 136.7 447 32.0
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 5.2e-30 136.3 424 32.1
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 5.2e-30 136.3 424 32.1
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 6.8e-30 136.0 453 31.8
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.4e-29 133.3 443 31.2
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 5.8e-29 132.9 486 31.3
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 6.4e-28 129.4 496 28.6
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 5.4e-27 126.3 434 30.4
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 9.2e-27 125.6 435 31.0
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.2e-26 125.2 280 38.2
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 2.0e-26 124.4 304 35.9
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 3.9e-25 120.2 450 30.2
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.1e-24 118.6 212 41.0
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 5.6e-24 116.3 474 28.1
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 9.5e-24 115.5 457 30.4
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 2.1e-23 114.4 162 48.1
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.7e-20 104.8 194 37.6
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 4.3e-16 90.1 180 39.4
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.1e-15 87.8 132 49.2
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.8e-15 87.4 122 51.6
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 2.6e-13 80.9 256 30.1
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 4.4e-13 80.1 339 28.6
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 4.4e-13 80.1 413 28.1
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.6e-10 71.6 182 35.2
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.6e-10 71.6 256 29.3
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 2.7e-10 70.9 140 41.4
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 1.1e-08 65.5 137 38.0
unitig_46.g18247 Utricularia gibba HOM05D006668 ORTHO05D008252 2.5e-08 64.3 446 25.3
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 9.6e-08 62.4 104 43.3
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 9.6e-08 62.4 450 24.9
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.1e-07 61.2 322 25.5
Actinidia11116 Actinidia chinensis HOM05D006668 ORTHO05D008252 3.1e-06 57.4 223 30.9
Ah.01g015540 Amaranthus hybridus HOM05D006668 ORTHO05D008252 5.2e-06 56.6 148 31.1


User provided reference genes

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