Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 2.2e-82 308.9 156 100.0
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-24 115.5 111 50.5
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-23 112.1 135 43.7
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.9e-23 112.1 99 53.5
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-23 111.7 99 53.5
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.8e-23 110.9 135 43.7
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-22 109.8 135 43.7
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-22 109.4 135 43.7
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-22 109.4 99 51.5
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.4e-22 107.8 99 51.5
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-21 107.1 98 50.0
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.8e-20 103.2 99 48.5
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-20 102.8 135 43.0
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-20 102.1 122 40.2
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 4.1e-20 102.1 122 40.2
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 4.1e-20 102.1 122 40.2
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 4.1e-20 102.1 122 40.2
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 5.3e-20 101.7 122 40.2
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-19 100.1 131 42.7
Sopen12g026640 Solanum pennellii HOM05D007248 ORTHO05D002765 1.5e-19 100.1 137 37.2
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-19 99.8 137 37.2
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-19 99.4 122 38.5
Sopen06g004330 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-19 99.0 137 37.2
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-18 97.1 122 38.5
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-18 95.5 152 37.5
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 5.0e-18 95.1 139 37.4
Nitab4.5_0002373g0160 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-17 94.0 99 50.5
Sopen09g007640 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-17 92.8 123 38.2
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-17 92.4 139 36.7
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 5.5e-17 91.7 139 38.1
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.4e-17 90.9 99 47.5
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-16 90.5 85 51.8
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-16 90.5 139 36.7
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-16 90.5 139 36.7
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.7e-16 88.6 99 47.5
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 1.0e-15 87.4 139 35.3
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.2e-15 85.1 99 45.5
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-14 84.0 85 47.1
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-14 82.4 95 41.1
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-14 82.0 143 29.4
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-14 82.0 95 41.1
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-13 80.5 95 38.9
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 1.7e-13 80.1 98 33.7
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-13 79.3 95 40.0
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-13 79.3 111 33.3
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-13 79.3 119 33.6
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.7e-13 79.0 128 37.5
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.8e-13 78.6 95 38.9
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 4.8e-13 78.6 97 36.1
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 6.3e-13 78.2 98 33.7
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 8.2e-13 77.8 98 33.7
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-12 77.0 95 36.8
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-12 77.0 95 37.9
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-12 77.0 99 43.4
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-12 76.6 98 31.6
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-12 75.1 103 31.1
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-12 75.1 95 37.9
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 5.3e-12 75.1 100 33.0
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 7.0e-12 74.7 98 30.6
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-11 73.9 105 35.2
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-11 73.2 95 35.8
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.5e-11 72.4 134 27.6
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 3.5e-11 72.4 108 32.4
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-11 72.0 95 38.9
Nitab4.5_0002612g0070 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.7e-11 71.2 60 56.7
Sopen01g014170 Solanum pennellii HOM05D000017 ORTHO05D000013 7.7e-11 71.2 78 34.6
Nitab4.5_0001140g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-10 68.9 85 43.5
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.8e-10 68.9 71 46.5
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 5.0e-10 68.6 141 27.7
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-10 68.2 95 34.7
Sopen10g008530 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-09 66.2 82 39.0
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 4.2e-09 65.5 103 27.2
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 5.5e-09 65.1 97 28.9
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-09 64.7 94 35.1
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-09 64.7 95 32.6
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.2e-09 64.7 95 35.8
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-08 63.9 93 23.7
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-08 63.9 88 33.0
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-08 63.5 97 28.9
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 1.6e-08 63.5 97 28.9
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 1.6e-08 63.5 102 29.4
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 2.1e-08 63.2 97 29.9
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 2.1e-08 63.2 97 27.8
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 2.7e-08 62.8 97 28.9
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 3.6e-08 62.4 103 24.3
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 3.6e-08 62.4 103 24.3
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 3.6e-08 62.4 103 24.3
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 3.6e-08 62.4 103 24.3
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-08 62.0 99 30.3
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 4.7e-08 62.0 97 28.9
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-08 61.6 82 35.4
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.1e-08 61.6 102 33.3
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 6.1e-08 61.6 89 30.3
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 8.0e-08 61.2 134 23.9
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.0e-08 61.2 115 30.4
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 1.0e-07 60.8 103 25.2
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-07 60.8 108 25.9
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-07 60.8 96 33.3
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-07 60.5 115 30.4
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 1.4e-07 60.5 97 26.8
Sopen02g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-07 60.5 122 32.0
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-07 60.5 104 34.6
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.8e-07 60.1 111 33.3
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-07 60.1 115 29.6
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-07 59.7 92 34.8
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 2.3e-07 59.7 105 28.6
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-07 58.9 96 29.2
Nitab4.5_0000036g0340 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.2e-07 58.5 76 39.5
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.2e-07 58.5 96 30.2
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-07 58.2 96 29.2
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.7e-07 58.2 123 28.5
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 6.7e-07 58.2 97 26.8
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.8e-07 57.8 86 30.2
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.8e-07 57.8 115 29.6
Nitab4.5_0004510g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.8e-07 57.8 71 42.3
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 8.8e-07 57.8 95 24.2
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 8.8e-07 57.8 95 24.2
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-06 57.4 115 30.4
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-06 57.0 127 27.6
CANSAT54G1301 Cannabis sativa HOM05D012404 ORTHO05D002765 1.5e-06 57.0 127 27.6
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-06 57.0 127 27.6
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-06 57.0 145 24.1
Peaxi162Scf01226g00018 Petunia axillaris HOM05D006864 ORTHO05D000013 1.5e-06 57.0 92 26.1
Nitab4.5_0000009g0470 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.0e-06 56.6 60 45.0
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-06 56.6 96 29.2
Oeu044344.1 Olea europaea HOM05D012404 ORTHO05D002765 2.0e-06 56.6 97 25.8
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-06 56.2 72 37.5
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.6e-06 56.2 115 28.7
Nitab4.5_0003479g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.3e-06 55.8 56 44.6
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.3e-06 55.8 123 27.6
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-06 55.8 82 30.5
Nitab4.5_0015150g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.3e-06 55.8 48 52.1
Peaxi162Scf00006g03314 Petunia axillaris HOM05D006864 ORTHO05D002765 3.3e-06 55.8 95 27.4
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 3.3e-06 55.8 95 24.2
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-06 55.5 112 28.6
Sopen09g026440 Solanum pennellii HOM05D000017 ORTHO05D000013 4.4e-06 55.5 69 34.8
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-06 55.1 72 37.5
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.5e-06 54.7 95 29.5
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 9.7e-06 54.3 100 24.0


User provided reference genes

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