Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 0.0e+00 1162.1 581 100.0
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 0.0e+00 1122.5 581 96.4
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 0.0e+00 1115.9 581 95.5
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 2.1e-287 991.9 589 87.9
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.0e-273 946.4 599 84.3
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 3.0e-257 891.7 550 84.9
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 6.7e-217 757.7 592 71.6
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 6.2e-215 751.1 614 68.6
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 3.9e-209 731.9 588 68.5
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 3.9e-209 731.9 518 74.1
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 5.1e-209 731.5 598 67.9
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.1e-208 730.3 610 66.4
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 9.6e-208 727.2 618 64.6
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 2.8e-207 725.7 609 65.0
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 2.4e-206 722.6 512 74.4
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 3.1e-206 722.2 603 66.5
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 4.0e-206 721.8 557 70.0
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 2.6e-205 719.2 514 74.3
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.4e-205 718.8 617 65.0
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 2.9e-204 715.7 599 67.1
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 1.9e-203 713.0 566 68.9
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 1.2e-202 710.3 514 72.6
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 4.6e-202 708.4 602 65.8
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 7.9e-202 707.6 562 67.6
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.0e-201 707.2 598 64.9
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 6.7e-201 704.5 601 65.6
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 6.7e-201 704.5 599 66.4
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.5e-200 703.4 512 71.7
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 4.3e-200 701.8 502 74.1
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 1.6e-199 699.9 592 66.4
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 2.8e-199 699.1 610 64.4
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 3.7e-199 698.7 608 65.1
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 4.8e-199 698.4 598 64.2
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 6.3e-199 698.0 591 65.0
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 8.2e-199 697.6 621 64.3
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 1.1e-198 697.2 591 64.6
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.4e-198 696.8 560 67.1
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.4e-198 696.0 605 64.8
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 2.4e-198 696.0 613 64.8
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 3.1e-198 695.7 601 64.9
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 6.9e-198 694.5 586 66.4
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 9.0e-198 694.1 590 64.7
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 9.0e-198 694.1 588 64.6
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 1.2e-197 693.7 587 64.1
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 1.5e-197 693.3 519 70.7
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 4.5e-197 691.8 412 82.8
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 4.5e-197 691.8 605 64.8
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.2e-196 689.5 605 64.5
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 2.2e-196 689.5 592 63.9
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 2.2e-196 689.5 602 64.3
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 2.9e-196 689.1 444 77.7
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 2.9e-196 689.1 600 64.2
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 3.8e-196 688.7 602 64.0
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 6.5e-196 688.0 498 72.3
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.1e-195 687.2 444 77.5
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 1.1e-195 687.2 619 63.0
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 3.2e-195 685.6 535 67.9
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 3.2e-195 685.6 595 64.5
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 5.5e-195 684.9 550 67.5
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 7.2e-195 684.5 618 62.1
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 1.6e-194 683.3 511 70.6
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.6e-194 683.3 596 63.6
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.1e-194 682.9 597 63.5
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 4.6e-194 681.8 443 77.9
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 7.9e-194 681.0 593 64.2
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 2.3e-193 679.5 603 63.8
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 3.9e-193 678.7 584 64.4
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 1.5e-192 676.8 588 63.6
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 1.9e-192 676.4 590 64.4
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 3.3e-192 675.6 432 77.3
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 3.3e-192 675.6 601 63.1
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.7e-191 673.3 600 62.7
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 3.7e-191 672.2 509 69.5
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.4e-190 670.2 539 65.9
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 6.9e-190 667.9 600 62.5
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.5e-189 666.8 610 62.3
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 2.0e-189 666.4 589 63.3
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 7.7e-189 664.5 510 69.8
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.3e-188 663.7 408 80.1
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 2.9e-188 662.5 496 70.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.9e-188 662.5 565 64.4
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 2.9e-188 662.5 440 76.1
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 6.5e-188 661.4 589 63.3
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 6.5e-188 661.4 406 80.5
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 6.5e-188 661.4 615 61.6
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.4e-187 660.2 588 63.1
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.9e-187 659.8 607 60.3
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 4.2e-187 658.7 593 61.7
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.6e-186 656.8 406 79.8
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 1.6e-186 656.8 597 61.0
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.1e-186 656.4 600 60.8
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 2.7e-186 656.0 438 75.6
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 4.7e-186 655.2 599 61.4
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 7.9e-186 654.4 428 76.6
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.0e-185 654.1 534 66.9
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 2.3e-185 652.9 575 64.3
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 5.1e-185 651.7 600 61.0
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.5e-184 650.2 510 66.3
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 3.3e-184 649.0 592 62.7
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 3.3e-184 649.0 408 78.7
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 4.8e-183 645.2 586 61.8
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.1e-182 642.5 508 65.9
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 3.1e-182 642.5 414 78.0
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 6.9e-182 641.3 555 62.0
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 9.1e-182 641.0 481 69.6
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.0e-181 639.8 498 67.7
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 7.7e-181 637.9 590 61.5
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 1.0e-180 637.5 586 61.1
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 8.5e-180 634.4 603 59.5
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 8.5e-180 634.4 493 66.9
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 4.7e-178 628.6 611 58.1
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 4.7e-178 628.6 588 59.7
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 6.1e-178 628.2 596 60.2
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 6.1e-178 628.2 473 68.3
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 8.0e-178 627.9 413 78.0
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.0e-177 627.5 600 59.5
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 3.0e-177 625.9 574 60.3
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 5.2e-177 625.2 589 59.9
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 5.2e-177 625.2 621 58.1
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 1.1e-176 624.0 594 59.4
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 2.6e-176 622.9 594 59.3
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 3.3e-176 622.5 578 59.9
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 7.4e-176 621.3 594 59.4
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 2.2e-175 619.8 594 59.3
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 1.1e-174 617.5 543 63.5
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 3.1e-174 615.9 448 70.3
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 3.1e-174 615.9 474 68.1
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 5.3e-174 615.1 576 60.1
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 1.6e-173 613.6 543 62.6
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 1.7e-172 610.1 468 68.4
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 1.7e-172 610.1 468 68.4
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 3.6e-170 602.4 500 64.8
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 3.6e-170 602.4 500 64.8
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 3.6e-170 602.4 500 64.8
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 7.0e-166 588.2 413 70.9
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.9e-164 582.8 361 80.6
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.8e-145 520.4 350 71.4
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 9.8e-144 514.6 499 56.7
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 2.9e-143 513.1 479 58.0
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.0e-140 503.1 460 58.5
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 2.9e-135 486.5 374 67.6
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 1.3e-132 477.6 365 65.2
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 4.7e-130 469.2 313 71.6
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 3.7e-98 363.2 209 80.4
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 3.1e-97 360.1 384 50.0
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 3.0e-92 343.6 197 80.7
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 5.1e-92 342.8 391 56.3
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 6.3e-82 309.3 180 79.4
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 5.1e-76 289.7 193 72.0
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.4e-73 280.8 159 82.4
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.1e-73 280.4 156 84.0
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.1e-73 280.4 156 84.0
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 7.2e-70 269.2 419 41.3
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 2.2e-63 247.7 362 39.0
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.4e-57 228.4 192 66.7
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 8.5e-55 219.2 302 39.4
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.8e-49 201.4 158 69.6
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.7e-47 194.9 263 39.5
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 9.1e-41 172.6 109 75.2
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 1.7e-39 168.3 187 51.9
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.4e-35 154.1 110 65.5
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 7.8e-32 142.9 147 54.4
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.1e-30 139.0 88 73.9
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.9e-30 138.3 209 35.9
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 1.2e-29 135.6 83 73.5
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 1.4e-28 132.1 128 54.7
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 1.8e-28 131.7 83 71.1
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 2.9e-26 124.4 225 40.9
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 4.9e-26 123.6 101 66.3
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.9e-22 111.7 117 51.3
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 6.4e-18 96.7 100 55.0
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 6.6e-15 86.7 111 45.9
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.1e-14 85.9 189 34.4
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.5e-14 85.5 94 53.2
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.8e-12 78.6 41 90.2
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 2.1e-08 65.1 127 38.6
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 3.0e-07 61.2 67 56.7
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.9e-06 58.5 31 80.6


User provided reference genes

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