Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009098 Solanum tuberosum HOM05D004891 ORTHO05D005997 3.7e-149 531.6 276 100.0
Sopen03g003460 Solanum pennellii HOM05D004891 ORTHO05D005997 6.1e-144 514.2 276 96.4
Sopen03g003400 Solanum pennellii HOM05D004891 ORTHO05D005997 1.8e-143 512.7 276 96.4
Nitab4.5_0000473g0100 Nicotiana tabacum HOM05D004891 ORTHO05D005997 2.6e-126 455.7 284 85.9
Nitab4.5_0000472g0010 Nicotiana tabacum HOM05D004891 ORTHO05D005997 1.8e-124 449.5 284 84.5
CAN.G108.22 Capsicum annuum HOM05D004891 ORTHO05D005997 1.2e-123 446.8 277 87.0
Dinv28341 Davidia involucrata HOM05D004891 ORTHO05D005997 2.4e-92 342.8 283 67.5
Hma1.2p1_0327F.1_g126710 Hydrangea macrophylla HOM05D004891 ORTHO05D005997 8.6e-90 334.3 288 66.7
Solyc03g007500.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 3.6e-88 328.9 276 68.5
Solyc03g007440.4 Solanum lycopersicum HOM05D004891 ORTHO05D005997 6.2e-88 328.2 276 68.5
Actinidia08623 Actinidia chinensis HOM05D004891 ORTHO05D005997 2.0e-86 323.2 281 64.4
MSTRG.8493 Avicennia marina HOM05D004891 ORTHO05D005997 2.4e-84 316.2 282 64.2
Cc02_g01930 Coffea canephora HOM05D004891 ORTHO05D005997 3.5e-83 312.4 297 61.3
Actinidia34190 Actinidia chinensis HOM05D004891 ORTHO05D005997 6.0e-83 311.6 276 62.3
TAR375G0232 Trochodendron aralioides HOM05D004891 ORTHO05D005997 7.8e-83 311.2 283 61.5
GSVIVG01028731001 Vitis vinifera HOM05D004891 ORTHO05D005997 5.1e-82 308.5 281 61.6
QL09p011070 Quercus lobata HOM05D004891 ORTHO05D005997 2.5e-81 306.2 280 62.5
MD01G1214600 Malus domestica HOM05D004891 ORTHO05D005997 5.6e-81 305.1 277 64.3
CSS0046287 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 7.3e-81 304.7 294 61.9
Manes.14G018900 Manihot esculenta HOM05D004891 ORTHO05D005997 7.3e-81 304.7 280 61.8
Thecc.03G192100 Theobroma cacao HOM05D004891 ORTHO05D005997 2.8e-80 302.8 279 62.0
HanXRQChr14g0462811 Helianthus annuus HOM05D004891 ORTHO05D005997 4.7e-80 302.0 279 60.9
PSO170G4664 Papaver somniferum HOM05D004891 ORTHO05D005997 6.2e-80 301.6 283 60.4
Duzib084G0775 Durio zibethinus HOM05D004891 ORTHO05D005997 1.4e-79 300.4 282 62.1
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 2.4e-79 299.7 286 61.2
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 5.2e-79 298.5 277 63.2
CiPaw.05G258300 Carya illinoinensis HOM05D004891 ORTHO05D005997 9.0e-79 297.7 284 62.0
Oeu037109.1 Olea europaea HOM05D004891 ORTHO05D005997 1.2e-78 297.4 284 59.5
Cfa016358 Carpinus fangiana HOM05D004891 ORTHO05D005997 2.0e-78 296.6 287 61.3
COL.COLO4_35665 Corchorus olitorius HOM05D004891 ORTHO05D005997 2.0e-78 296.6 280 60.4
Rhsim03G0198300 Rhododendron simsii HOM05D004891 ORTHO05D005997 2.2e-77 293.1 291 59.1
SGA_v2.0_scaffold10G05259 Striga asiatica HOM05D004891 ORTHO05D005997 3.8e-77 292.4 276 59.4
Oeu024464.1 Olea europaea HOM05D004891 ORTHO05D005997 2.4e-76 289.7 286 60.8
MBI06_g22405_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D005997 4.2e-76 288.9 280 57.9
Gohir.A12G252100 Gossypium hirsutum HOM05D004891 ORTHO05D005997 5.4e-76 288.5 282 58.2
FAN10G2020 Fragaria x ananassa HOM05D004891 ORTHO05D005997 7.1e-76 288.1 290 59.7
FAN10G2063 Fragaria x ananassa HOM05D004891 ORTHO05D005997 7.1e-76 288.1 290 59.7
Gorai.008G271100 Gossypium raimondii HOM05D004891 ORTHO05D005997 9.3e-76 287.7 281 58.0
Gohir.D12G253400 Gossypium hirsutum HOM05D004891 ORTHO05D005997 1.2e-75 287.3 281 58.0
Lalb_Chr01g0014881 Lupinus albus HOM05D004891 ORTHO05D005997 1.2e-75 287.3 284 58.5
Prupe.2G306500 Prunus persica HOM05D004891 ORTHO05D005997 1.2e-75 287.3 280 61.4
FvH4_7g30940 Fragaria vesca HOM05D004891 ORTHO05D005997 2.1e-75 286.6 294 58.5
FAN01G2480 Fragaria x ananassa HOM05D004891 ORTHO05D005997 2.1e-75 286.6 296 58.4
Migut.F01055 Erythranthe guttata HOM05D004891 ORTHO05D005997 3.5e-75 285.8 284 60.9
Potri.012G032200 Populus trichocarpa HOM05D004891 ORTHO05D005997 3.5e-75 285.8 287 58.2
Potri.015G022900 Populus trichocarpa HOM05D004891 ORTHO05D005997 3.5e-75 285.8 282 61.3
SalBow2G0402 Salvia bowleyana HOM05D004891 ORTHO05D005997 4.6e-75 285.4 281 60.1
FAN06G4508 Fragaria x ananassa HOM05D004891 ORTHO05D005997 6.0e-75 285.0 294 58.2
PSO063G3645 Papaver somniferum HOM05D004891 ORTHO05D005997 6.0e-75 285.0 284 57.7
Cpa.g.sc3.45 Carica papaya HOM05D004891 ORTHO05D005997 7.8e-75 284.6 280 60.4
Ciclev10005604m.g Citrus clementina HOM05D004891 ORTHO05D005997 1.7e-74 283.5 283 58.3
ClCG05G008660 Citrullus lanatus HOM05D004891 ORTHO05D005997 2.3e-74 283.1 282 58.5
FAN03G3090 Fragaria x ananassa HOM05D004891 ORTHO05D005997 3.0e-74 282.7 312 56.4
arahy.Tifrunner.gnm1.ann1.6V5JG4 Arachis hypogaea HOM05D004891 ORTHO05D005997 5.1e-74 282.0 283 58.3
arahy.Tifrunner.gnm1.ann1.PB2THD Arachis hypogaea HOM05D004891 ORTHO05D005997 6.6e-74 281.6 283 57.6
CANSAT21G1757 Cannabis sativa HOM05D004891 ORTHO05D005997 8.7e-74 281.2 280 59.6
Glyma.13G040300 Glycine max HOM05D004891 ORTHO05D005997 8.7e-74 281.2 288 58.3
RcHm_v2.0_Chr1g0380031 Rosa chinensis HOM05D004891 ORTHO05D005997 1.5e-73 280.4 285 59.6
Nn7g37380 Nelumbo nucifera HOM05D004891 ORTHO05D005997 7.3e-73 278.1 281 55.5
Lj3A911G21 Lonicera japonica HOM05D004891 ORTHO05D005997 1.6e-72 276.9 322 52.2
CiPaw.06G007100 Carya illinoinensis HOM05D004891 ORTHO05D005997 3.6e-72 275.8 280 58.2
MELO3C006974.2 Cucumis melo HOM05D004891 ORTHO05D005997 4.8e-72 275.4 282 58.9
Lsat_1_v5_gn_2_134260 Lactuca sativa HOM05D004891 ORTHO05D005997 4.8e-72 275.4 281 57.3
TPR.G33305 Trifolium pratense HOM05D004891 ORTHO05D005997 4.8e-72 275.4 284 59.5
Phvul.008G159100 Phaseolus vulgaris HOM05D004891 ORTHO05D005997 8.1e-72 274.6 281 58.7
CsaV3_3G021850 Cucumis sativus L. HOM05D004891 ORTHO05D005997 1.1e-71 274.2 280 58.2
Manes.06G156500 Manihot esculenta HOM05D004891 ORTHO05D005997 1.1e-71 274.2 279 57.7
Medtr1g028580 Medicago truncatula HOM05D004891 ORTHO05D005997 2.4e-71 273.1 280 57.9
THA.LOC104825132 Tarenaya hassleriana HOM05D004891 ORTHO05D005997 4.0e-71 272.3 279 54.5
TWI23G0467 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 9.0e-71 271.2 279 56.3
FAN06G0473 Fragaria x ananassa HOM05D004891 ORTHO05D005997 1.2e-70 270.8 321 53.6
Glyma.14G123700 Glycine max HOM05D004891 ORTHO05D005997 1.2e-70 270.8 284 56.7
VMungo0647G1360 Vigna mungo HOM05D004891 ORTHO05D005997 5.8e-70 268.5 275 57.8
ECA238G3691 Erigeron canadensis HOM05D004891 ORTHO05D005997 9.9e-70 267.7 283 54.8
TWI14G0964 Tripterygium wilfordii HOM05D004891 ORTHO05D005997 1.3e-69 267.3 279 57.3
Lj1g0012174 Lotus japonicus HOM05D004891 ORTHO05D005997 4.9e-69 265.4 287 56.4
Sp6g15430 Schrenkiella parvula HOM05D004891 ORTHO05D005997 6.4e-69 265.0 279 53.0
PGR142G0227 Punica granatum HOM05D004891 ORTHO05D005997 3.2e-68 262.7 281 56.9
Peaxi162Scf00904g00326 Petunia axillaris HOM05D004891 ORTHO05D005997 5.4e-68 261.9 273 58.2
Psat6g039240 Pisum sativum HOM05D004891 ORTHO05D005997 2.1e-67 260.0 235 62.1
Carub.0008s1346 Capsella rubella HOM05D004891 ORTHO05D005997 3.5e-67 259.2 280 52.9
Aa31LG3G9250 Aethionema arabicum HOM05D004891 ORTHO05D005997 7.9e-67 258.1 276 52.9
CARHR266320 Cardamine hirsuta HOM05D004891 ORTHO05D005997 7.9e-67 258.1 280 51.8
Thhalv10014380m.g Eutrema salsugineum HOM05D004891 ORTHO05D005997 3.9e-66 255.8 279 51.6
EL10Ac3g05352 Beta vulgaris HOM05D004891 ORTHO05D005997 5.1e-66 255.4 289 54.7
AUR62031485 Chenopodium quinoa HOM05D004891 ORTHO05D005997 1.5e-65 253.8 298 52.0
Actinidia34193 Actinidia chinensis HOM05D004891 ORTHO05D005997 3.3e-65 252.7 276 55.8
Aqoxy5G04112 Aquilegia oxysepala HOM05D004891 ORTHO05D005997 3.3e-65 252.7 290 51.4
Sabra12G0021600 Salix brachista HOM05D004891 ORTHO05D005997 5.6e-65 251.9 355 47.0
Eucgr.K00322 Eucalyptus grandis HOM05D004891 ORTHO05D005997 7.4e-65 251.5 289 56.4
Sed0021890 Sechium edule HOM05D004891 ORTHO05D005997 9.6e-65 251.1 280 52.9
BcaB08g35688 Brassica carinata HOM05D004891 ORTHO05D005997 1.4e-63 247.3 279 49.5
AL8G27930 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 2.4e-63 246.5 279 50.5
AT5G53280 Arabidopsis thaliana HOM05D004891 ORTHO05D005997 5.3e-63 245.4 279 50.2
Sed0007260 Sechium edule HOM05D004891 ORTHO05D005997 9.0e-63 244.6 279 52.0
Actinidia03156 Actinidia chinensis HOM05D004891 ORTHO05D005997 1.2e-62 244.2 280 53.6
A03p15250 Brassica napus HOM05D004891 ORTHO05D005997 1.2e-62 244.2 276 48.2
Sabra15G0017200 Salix brachista HOM05D004891 ORTHO05D005997 1.2e-62 244.2 350 47.7
Ah.07g206050 Amaranthus hybridus HOM05D004891 ORTHO05D005997 4.5e-62 242.3 288 52.1
C03p17830 Brassica napus HOM05D004891 ORTHO05D005997 7.6e-62 241.5 279 48.7
BolC3t14190H Brassica oleracea HOM05D004891 ORTHO05D005997 7.6e-62 241.5 279 48.7
Hund11687 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.2e-61 240.0 276 53.3
BraA03t10818Z Brassica rapa HOM05D004891 ORTHO05D005997 4.9e-61 238.8 276 47.5
Hund11688 Selenicereus undatus HOM05D004891 ORTHO05D005997 2.4e-60 236.5 276 52.5
Sc19g0001110 Simmondsia chinensis HOM05D004891 ORTHO05D005997 3.2e-60 236.1 280 52.9
unitig_90.g27528 Utricularia gibba HOM05D004891 ORTHO05D005997 3.2e-60 236.1 276 51.4
Hund04825 Selenicereus undatus HOM05D004891 ORTHO05D005997 4.6e-59 232.3 276 52.5
CDE10G0607 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 7.9e-59 231.5 282 50.7
BcaC04g20477 Brassica carinata HOM05D004891 ORTHO05D005997 1.0e-58 231.1 279 48.7
C09p43070 Brassica napus HOM05D004891 ORTHO05D005997 1.0e-58 231.1 279 48.7
BolC9t57178H Brassica oleracea HOM05D004891 ORTHO05D005997 1.0e-58 231.1 279 48.7
BcaB01g04239 Brassica carinata HOM05D004891 ORTHO05D005997 1.8e-58 230.3 280 47.5
BcaC01g06235 Brassica carinata HOM05D004891 ORTHO05D005997 2.5e-57 226.5 242 50.4
HPP92_024018 Vanilla planifolia HOM05D004891 ORTHO05D005997 7.4e-57 224.9 276 46.4
Dinv35303 Davidia involucrata HOM05D004891 ORTHO05D005997 2.8e-56 223.0 187 66.3
vmacro06579 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 1.1e-55 221.1 473 36.2
CDE10G1089 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 2.4e-55 219.9 287 48.8
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 3.1e-55 219.5 279 47.7
BraA10t43162Z Brassica rapa HOM05D004891 ORTHO05D005997 3.1e-55 219.5 280 48.2
Lj1C1012T12 Lonicera japonica HOM05D004891 ORTHO05D005997 1.3e-53 214.2 277 51.6
vmacro23247 Vaccinium macrocarpon HOM05D004891 ORTHO05D005997 4.2e-52 209.1 504 33.9
ATR1093G054 Amborella trichopoda HOM05D004891 ORTHO05D005997 2.3e-50 203.4 296 44.9
TAR374G1584 Trochodendron aralioides HOM05D004891 ORTHO05D005997 2.5e-49 199.9 176 60.2
MSTRG.23354 Avicennia marina HOM05D004891 ORTHO05D005997 3.4e-46 189.5 175 60.6
CSS0025805 Camellia sinensis var. sinensis HOM05D004891 ORTHO05D005997 3.8e-45 186.0 175 61.1
unitig_736.g22889 Utricularia gibba HOM05D004891 ORTHO05D005997 1.9e-44 183.7 286 47.2
Ah.13g069830 Amaranthus hybridus HOM05D004891 ORTHO05D005997 3.9e-42 176.0 241 46.5
Zm00001eb237900 Zea mays HOM05D004891 ORTHO05D005997 6.9e-39 165.2 222 47.3
DCAR_014529 Daucus carota HOM05D004891 ORTHO05D005997 3.4e-38 162.9 175 50.9
AUR62021048 Chenopodium quinoa HOM05D004891 ORTHO05D005997 2.9e-37 159.8 178 53.4
Atru.chr1.279 Acer truncatum HOM05D004891 ORTHO05D005997 1.8e-34 150.6 120 66.7
Os01g0224200 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 3.7e-32 142.9 242 42.6
Oeu036883.1 Olea europaea HOM05D004891 ORTHO05D005997 4.8e-32 142.5 175 51.4
Os06g0506000 Oryza sativa ssp. japonica HOM05D004891 ORTHO05D005997 2.0e-30 137.1 234 41.9
MSTRG.62 Avicennia marina HOM05D004891 ORTHO05D005997 2.5e-28 130.2 107 70.1
Zm00001eb203870 Zea mays HOM05D004891 ORTHO05D005997 3.6e-27 126.3 278 36.7
Thecc.01G303500 Theobroma cacao HOM05D004891 ORTHO05D005997 3.0e-26 123.2 97 64.9
Zm00001eb338960 Zea mays HOM05D004891 ORTHO05D005997 1.3e-24 117.9 152 50.0
CDE02G0860 Ceratophyllum demersum HOM05D004891 ORTHO05D005997 3.7e-24 116.3 279 32.6
Oeu036884.1 Olea europaea HOM05D004891 ORTHO05D005997 1.4e-23 114.4 102 60.8
TAR629G2914 Trochodendron aralioides HOM05D004891 ORTHO05D005997 5.5e-20 102.4 267 34.1
AL8G27980 Arabidopsis lyrata HOM05D004891 ORTHO05D005997 6.1e-19 99.0 150 40.7
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 5.3e-15 85.9 231 32.5
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 5.3e-15 85.9 154 36.4
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.2e-12 76.6 183 33.3
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 9.4e-12 75.1 164 34.1
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 9.4e-12 75.1 152 35.5
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 2.7e-11 73.6 152 32.9
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 3.6e-11 73.2 163 35.0
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 6.1e-11 72.4 157 33.8
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.0e-10 70.1 152 34.2
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.0e-10 70.1 152 32.2
CBR_g41289 Chara braunii HOM05D004891 ORTHO05D006368 2.2e-08 63.9 171 31.0
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 2.2e-08 63.9 71 46.5
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 3.7e-08 63.2 167 29.3
Sabra10G0105200 Salix brachista HOM05D004891 ORTHO05D005997 3.7e-08 63.2 84 46.4
Sabra15G0071500 Salix brachista HOM05D004891 ORTHO05D005997 3.7e-08 63.2 84 46.4
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 1.1e-07 61.6 149 30.2
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 2.4e-07 60.5 168 31.0
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 2.4e-07 60.5 157 30.6
SEGI_25677 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 2.4e-07 60.5 71 42.3
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 4.1e-07 59.7 281 24.2
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 7.0e-07 58.9 80 42.5
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 9.1e-07 58.5 134 35.8
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 9.1e-07 58.5 167 26.9
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 1.2e-06 58.2 193 28.5
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 1.2e-06 58.2 206 24.8
Zm00001eb192840 Zea mays HOM05D004891 ORTHO05D005997 1.2e-06 58.2 95 41.1
Sabra12G0063200 Salix brachista HOM05D004891 ORTHO05D005997 2.0e-06 57.4 84 45.2
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 2.7e-06 57.0 79 40.5
SEGI_09179 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 4.5e-06 56.2 161 28.0
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 5.9e-06 55.8 178 29.2
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 7.7e-06 55.5 104 34.6


User provided reference genes

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