Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 7.6e-65 250.4 128 100.0
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 4.8e-59 231.1 128 92.2
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 4.8e-59 231.1 128 92.2
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 5.3e-42 174.5 132 73.5
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 9.1e-18 94.0 129 48.8
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 2.9e-16 89.0 126 50.8
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 6.5e-16 87.8 127 46.5
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 1.9e-15 86.3 123 49.6
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 1.9e-15 86.3 123 49.6
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 5.5e-15 84.7 137 45.3
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 5.5e-15 84.7 113 46.9
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 6.1e-14 81.3 129 45.7
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.0e-13 80.5 62 67.7
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 4.0e-13 78.6 117 47.0
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 8.8e-13 77.4 126 41.3
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 8.8e-13 77.4 85 54.1
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 1.5e-12 76.6 144 41.0
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 1.5e-12 76.6 64 64.1
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 2.0e-12 76.3 120 42.5
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 2.6e-12 75.9 135 42.2
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 3.4e-12 75.5 120 44.2
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 4.4e-12 75.1 105 44.8
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 9.8e-12 73.9 131 41.2
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 6.3e-11 71.2 108 41.7
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 6.3e-11 71.2 66 59.1
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 6.3e-11 71.2 108 45.4
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 8.3e-11 70.9 134 41.0
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 1.1e-10 70.5 110 42.7
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 1.4e-10 70.1 111 41.4
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 1.4e-10 70.1 104 42.3
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 1.4e-10 70.1 79 54.4
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 1.4e-10 70.1 70 54.3
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.1e-10 68.9 106 44.3
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 4.1e-10 68.6 136 37.5
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 4.1e-10 68.6 106 44.3
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 4.1e-10 68.6 106 44.3
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 1.6e-09 66.6 64 59.4
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 2.0e-09 66.2 108 40.7
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 3.5e-09 65.5 134 37.3
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 4.5e-09 65.1 120 37.5
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 1.0e-08 63.9 126 34.1
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 1.0e-08 63.9 97 47.4
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 1.3e-08 63.5 77 50.6
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 2.2e-08 62.8 127 37.8
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 2.9e-08 62.4 136 38.2
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 3.8e-08 62.0 95 38.9
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 3.8e-08 62.0 96 38.5
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 3.8e-08 62.0 96 39.6
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.8e-08 62.0 95 42.1
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 3.8e-08 62.0 98 44.9
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 5.0e-08 61.6 119 38.7
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 5.0e-08 61.6 130 36.2
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 6.5e-08 61.2 133 36.8
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 6.5e-08 61.2 115 40.9
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 8.5e-08 60.8 96 38.5
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 8.5e-08 60.8 73 45.2
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 8.5e-08 60.8 124 37.1
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 8.5e-08 60.8 129 39.5
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 1.1e-07 60.5 96 37.5
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 1.1e-07 60.5 71 45.1
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 1.1e-07 60.5 82 41.5
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 1.1e-07 60.5 117 35.9
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 1.5e-07 60.1 93 43.0
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.9e-07 59.7 111 36.9
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.9e-07 59.7 95 41.1
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 1.9e-07 59.7 128 35.2
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 1.9e-07 59.7 130 40.0
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 2.5e-07 59.3 93 39.8
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 2.5e-07 59.3 95 37.9
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 2.5e-07 59.3 95 37.9
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 2.5e-07 59.3 95 37.9
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 2.5e-07 59.3 91 42.9
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 2.5e-07 59.3 122 34.4
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 3.2e-07 58.9 98 35.7
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 3.2e-07 58.9 70 47.1
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 3.2e-07 58.9 57 50.9
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 4.2e-07 58.5 93 38.7
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 4.2e-07 58.5 125 38.4
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 4.2e-07 58.5 95 37.9
Dinv10120 Davidia involucrata HOM05D006547 ORTHO05D008112 5.5e-07 58.2 117 34.2
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 5.5e-07 58.2 80 40.0
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 7.2e-07 57.8 96 36.5
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.2e-06 57.0 93 37.6
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.2e-06 57.0 93 37.6
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 1.2e-06 57.0 135 36.3
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 1.2e-06 57.0 103 41.7
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.6e-06 56.6 114 36.8
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 1.6e-06 56.6 61 47.5
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 1.6e-06 56.6 110 38.2
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 2.1e-06 56.2 104 35.6
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 3.6e-06 55.5 102 39.2
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 3.6e-06 55.5 136 36.8
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 3.6e-06 55.5 78 42.3
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 4.7e-06 55.1 79 40.5
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 4.7e-06 55.1 121 33.1
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 6.1e-06 54.7 74 41.9
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 8.0e-06 54.3 96 34.4
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 8.0e-06 54.3 96 35.4
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 8.0e-06 54.3 96 35.4
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 8.0e-06 54.3 122 36.1


User provided reference genes

Program Settings