Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400008974 Solanum tuberosum HOM05D000486 ORTHO05D013772 8.3e-41 169.9 81 100.0
Solyc09g010080.3 Solanum lycopersicum HOM05D000486 ORTHO05D000375 4.4e-26 120.9 66 84.8
Peaxi162Scf00069g00810 Petunia axillaris HOM05D000486 ORTHO05D000375 1.1e-24 116.3 67 77.6
CAN.G397.78 Capsicum annuum HOM05D000486 ORTHO05D000375 5.0e-22 107.5 66 72.7
Nitab4.5_0001875g0110 Nicotiana tabacum HOM05D000486 ORTHO05D000375 5.2e-19 97.4 67 70.1
Nitab4.5_0003404g0040 Nicotiana tabacum HOM05D000486 ORTHO05D000375 7.5e-18 93.6 64 67.2
Nitab4.5_0011403g0010 Nicotiana tabacum HOM05D000486 ORTHO05D000375 1.1e-16 89.7 64 59.4
Nitab4.5_0001875g0120 Nicotiana tabacum HOM05D000486 ORTHO05D000375 5.4e-16 87.4 71 62.0
Nitab4.5_0001933g0060 Nicotiana tabacum HOM05D000486 ORTHO05D000375 9.2e-16 86.7 64 64.1
Nitab4.5_0024779g0010 Nicotiana tabacum HOM05D000486 ORTHO05D013772 3.5e-15 84.7 63 60.3
CAN.G397.79 Capsicum annuum HOM05D000486 ORTHO05D000375 7.8e-15 83.6 67 59.7
Nitab4.5_0003404g0020 Nicotiana tabacum HOM05D000486 ORTHO05D000375 3.9e-14 81.3 64 59.4
Peaxi162Scf00096g00715 Petunia axillaris HOM05D000486 ORTHO05D000375 3.9e-14 81.3 66 59.1
Sopen09g004830 Solanum pennellii HOM05D000486 ORTHO05D000375 5.0e-14 80.9 66 54.5
Peaxi162Scf00096g00825 Petunia axillaris HOM05D000486 ORTHO05D000375 3.3e-13 78.2 69 52.2
Solyc10g083300.2 Solanum lycopersicum HOM05D000486 ORTHO05D000375 3.6e-12 74.7 61 60.7
PGSC0003DMG402028252 Solanum tuberosum HOM05D000486 ORTHO05D000375 8.1e-12 73.6 69 58.0
Solyc10g083290.4 Solanum lycopersicum HOM05D000486 ORTHO05D000375 1.8e-11 72.4 69 56.5
Sopen10g032770 Solanum pennellii HOM05D000486 ORTHO05D000375 1.8e-11 72.4 69 56.5
Duzib093G0376 Durio zibethinus HOM05D000486 ORTHO05D000375 3.1e-11 71.6 62 48.4
Hma1.2p1_0820F.1_g223980 Hydrangea macrophylla HOM05D000486 ORTHO05D000375 5.2e-11 70.9 67 50.7
FAN14G1314 Fragaria x ananassa HOM05D000486 ORTHO05D000375 8.9e-11 70.1 64 56.2
FAN02G1370 Fragaria x ananassa HOM05D000486 ORTHO05D000375 1.2e-10 69.7 67 55.2
Peaxi162Scf00146g00812 Petunia axillaris HOM05D000486 ORTHO05D000375 1.2e-10 69.7 63 49.2
Cc06_g06090 Coffea canephora HOM05D000486 ORTHO05D000375 1.5e-10 69.3 66 56.1
RcHm_v2.0_Chr3g0474371 Rosa chinensis HOM05D000486 ORTHO05D000375 2.0e-10 68.9 61 54.1
Migut.J01013 Erythranthe guttata HOM05D000486 ORTHO05D000375 2.6e-10 68.6 71 52.1
Peaxi162Scf00096g00716 Petunia axillaris HOM05D000486 ORTHO05D000375 2.6e-10 68.6 55 61.8
Peaxi162Scf00146g00813 Petunia axillaris HOM05D000486 ORTHO05D000375 2.6e-10 68.6 63 47.6
Ciclev10013701m.g Citrus clementina HOM05D000486 ORTHO05D000375 7.5e-10 67.0 56 51.8
MD12G1028200 Malus domestica HOM05D000486 ORTHO05D000375 7.5e-10 67.0 57 50.9
Oeu047848.1 Olea europaea HOM05D000486 ORTHO05D013772 1.3e-09 66.2 65 50.8
Prupe.7G103200 Prunus persica HOM05D000486 ORTHO05D000375 1.3e-09 66.2 52 53.8
Dinv21184 Davidia involucrata HOM05D000486 ORTHO05D000375 2.2e-09 65.5 60 53.3
FvH4_6g19270 Fragaria vesca HOM05D000486 ORTHO05D000375 2.2e-09 65.5 59 57.6
unitig_32.g11216 Utricularia gibba HOM05D000486 ORTHO05D000375 2.2e-09 65.5 70 44.3
TAR633G1502 Trochodendron aralioides HOM05D000486 ORTHO05D000375 2.9e-09 65.1 62 51.6
unitig_744.g24701 Utricularia gibba HOM05D000486 ORTHO05D000375 4.9e-09 64.3 69 47.8
CiPaw.10G011500 Carya illinoinensis HOM05D000486 ORTHO05D000375 6.4e-09 63.9 50 58.0
Thecc.05G092400 Theobroma cacao HOM05D000486 ORTHO05D000375 1.1e-08 63.2 58 51.7
DCAR_020738 Daucus carota HOM05D000486 ORTHO05D000375 1.4e-08 62.8 52 57.7
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 1.4e-08 62.8 68 44.1
A04p27680 Brassica napus HOM05D000486 ORTHO05D000375 2.4e-08 62.0 70 44.3
BraA04t18263Z Brassica rapa HOM05D000486 ORTHO05D000375 2.4e-08 62.0 70 44.3
RcHm_v2.0_Chr3g0474381 Rosa chinensis HOM05D000486 ORTHO05D000375 2.4e-08 62.0 62 50.0
PGSC0003DMG400011037 Solanum tuberosum HOM05D000486 ORTHO05D000375 2.4e-08 62.0 53 54.7
TAR369G0260 Trochodendron aralioides HOM05D000486 ORTHO05D000375 2.4e-08 62.0 49 59.2
BolC4t28000H Brassica oleracea HOM05D000486 ORTHO05D000375 3.2e-08 61.6 70 44.3
CAN.G1018.14 Capsicum annuum HOM05D000486 ORTHO05D000375 4.1e-08 61.2 48 60.4
Potri.006G210600 Populus trichocarpa HOM05D000486 ORTHO05D000375 4.1e-08 61.2 50 60.0
A03p19960 Brassica napus HOM05D000486 ORTHO05D000375 5.4e-08 60.8 50 52.0
C03p23400 Brassica napus HOM05D000486 ORTHO05D000375 5.4e-08 60.8 50 52.0
BolC3t14738H Brassica oleracea HOM05D000486 ORTHO05D000375 5.4e-08 60.8 50 52.0
BraA03t11248Z Brassica rapa HOM05D000486 ORTHO05D000375 5.4e-08 60.8 50 52.0
Solyc10g085360.3 Solanum lycopersicum HOM05D000486 ORTHO05D000375 5.4e-08 60.8 52 51.9
CSS0031558 Camellia sinensis var. sinensis HOM05D000486 ORTHO05D000375 7.1e-08 60.5 61 49.2
vmacro07425 Vaccinium macrocarpon HOM05D000486 ORTHO05D000375 7.1e-08 60.5 63 46.0
CSS0041016 Camellia sinensis var. sinensis HOM05D000486 ORTHO05D000375 9.2e-08 60.1 61 49.2
Oeu002494.1 Olea europaea HOM05D000486 ORTHO05D000375 9.2e-08 60.1 49 59.2
arahy.Tifrunner.gnm1.ann1.XHN8S9 Arachis hypogaea HOM05D000486 ORTHO05D000375 1.2e-07 59.7 61 50.8
Sabra06G0162100 Salix brachista HOM05D000486 ORTHO05D000375 1.2e-07 59.7 51 56.9
MSTRG.18892 Avicennia marina HOM05D000486 ORTHO05D000375 1.6e-07 59.3 40 60.0
MSTRG.26628 Avicennia marina HOM05D000486 ORTHO05D013772 1.6e-07 59.3 40 60.0
BcaB01g03854 Brassica carinata HOM05D000486 ORTHO05D000375 1.6e-07 59.3 60 45.0
Cc00_g15520 Coffea canephora HOM05D000486 ORTHO05D000375 1.6e-07 59.3 63 47.6
Gorai.006G153800 Gossypium raimondii HOM05D000486 ORTHO05D000375 1.6e-07 59.3 45 51.1
Medtr7g105050 Medicago truncatula HOM05D000486 ORTHO05D000375 2.1e-07 58.9 39 66.7
QL07p038464 Quercus lobata HOM05D000486 ORTHO05D000375 2.1e-07 58.9 57 47.4
BcaC02g09237 Brassica carinata HOM05D000486 ORTHO05D000375 2.7e-07 58.5 70 42.9
BcaC02g09239 Brassica carinata HOM05D000486 ORTHO05D000375 2.7e-07 58.5 70 42.9
A04p06820 Brassica napus HOM05D000486 ORTHO05D000375 2.7e-07 58.5 70 42.9
C04p40380 Brassica napus HOM05D000486 ORTHO05D000375 2.7e-07 58.5 70 42.9
BolC4t25618H Brassica oleracea HOM05D000486 ORTHO05D000375 2.7e-07 58.5 70 42.9
CARHR130430 Cardamine hirsuta HOM05D000486 ORTHO05D000375 2.7e-07 58.5 41 58.5
arahy.Tifrunner.gnm1.ann1.UCJA0M Arachis hypogaea HOM05D000486 ORTHO05D000375 3.5e-07 58.2 55 50.9
BraA04t16382Z Brassica rapa HOM05D000486 ORTHO05D000375 3.5e-07 58.2 70 41.4
CSS0039950 Camellia sinensis var. sinensis HOM05D000486 ORTHO05D000375 3.5e-07 58.2 54 46.3
Potri.016G077400 Populus trichocarpa HOM05D000486 ORTHO05D000375 3.5e-07 58.2 50 52.0
Potri.016G077500 Populus trichocarpa HOM05D000486 ORTHO05D000375 3.5e-07 58.2 50 54.0
Rhsim03G0073700 Rhododendron simsii HOM05D000486 ORTHO05D000375 3.5e-07 58.2 58 48.3
Actinidia05413 Actinidia chinensis HOM05D000486 ORTHO05D000375 4.6e-07 57.8 40 60.0
BcaB02g08560 Brassica carinata HOM05D000486 ORTHO05D000375 4.6e-07 57.8 70 42.9
Lsat_1_v5_gn_5_164540 Lactuca sativa HOM05D000486 ORTHO05D000375 4.6e-07 57.8 66 47.0
Cpa.g.sc104.108 Carica papaya HOM05D000486 ORTHO05D000375 6.0e-07 57.4 54 50.0
Glyma.03G197400 Glycine max HOM05D000486 ORTHO05D000375 6.0e-07 57.4 54 51.9
MD14G1028500 Malus domestica HOM05D000486 ORTHO05D000375 6.0e-07 57.4 66 43.9
MSTRG.19273 Avicennia marina HOM05D000486 ORTHO05D000375 7.8e-07 57.0 54 50.0
Migut.L01797 Erythranthe guttata HOM05D000486 ORTHO05D000375 7.8e-07 57.0 54 50.0
Glyma.19G195400 Glycine max HOM05D000486 ORTHO05D000375 7.8e-07 57.0 54 51.9
Lj1g0023103 Lotus japonicus HOM05D000486 ORTHO05D000375 7.8e-07 57.0 60 48.3
PGR004G2475 Punica granatum HOM05D000486 ORTHO05D000375 7.8e-07 57.0 50 48.0
TPR.G3214 Trifolium pratense HOM05D000486 ORTHO05D013772 7.8e-07 57.0 60 43.3
AT2G36190 Arabidopsis thaliana HOM05D000486 ORTHO05D000375 1.0e-06 56.6 41 56.1
arahy.Tifrunner.gnm1.ann1.61U43X Arachis hypogaea HOM05D000486 ORTHO05D000375 1.0e-06 56.6 51 52.9
Thhalv10010231m.g Eutrema salsugineum HOM05D000486 ORTHO05D000375 1.0e-06 56.6 70 42.9
AL4G32290 Arabidopsis lyrata HOM05D000486 ORTHO05D000375 1.3e-06 56.2 59 44.1
Gohir.D01G194550 Gossypium hirsutum HOM05D000486 ORTHO05D013772 1.3e-06 56.2 57 49.1
Prupe.7G103300 Prunus persica HOM05D000486 ORTHO05D000375 1.3e-06 56.2 54 51.9
Psat6g084360 Pisum sativum HOM05D000486 ORTHO05D000375 1.7e-06 55.8 48 58.3
Sabra16G0079500 Salix brachista HOM05D000486 ORTHO05D000375 1.7e-06 55.8 39 56.4
Sabra16G0082100 Salix brachista HOM05D000486 ORTHO05D000375 1.7e-06 55.8 39 56.4
Sabra16G0082300 Salix brachista HOM05D000486 ORTHO05D000375 1.7e-06 55.8 39 56.4
Gohir.A09G140400 Gossypium hirsutum HOM05D000486 ORTHO05D000375 2.3e-06 55.5 54 48.1
Gohir.D09G134100 Gossypium hirsutum HOM05D000486 ORTHO05D000375 2.3e-06 55.5 54 48.1
Gorai.006G153700 Gossypium raimondii HOM05D000486 ORTHO05D000375 2.3e-06 55.5 54 48.1
HanXRQChr16g0498631 Helianthus annuus HOM05D000486 ORTHO05D000375 2.3e-06 55.5 59 47.5
Psat3g031240 Pisum sativum HOM05D000486 ORTHO05D000375 2.3e-06 55.5 53 56.6
PGR119G0646 Punica granatum HOM05D000486 ORTHO05D000375 2.3e-06 55.5 68 45.6
Thhalv10016415m.g Eutrema salsugineum HOM05D000486 ORTHO05D000375 3.0e-06 55.1 56 50.0
Nn2g14209 Nelumbo nucifera HOM05D000486 ORTHO05D000375 3.0e-06 55.1 51 51.0
Solyc10g085650.2 Solanum lycopersicum HOM05D000486 ORTHO05D000375 3.0e-06 55.1 68 47.1
Eucgr.A02647 Eucalyptus grandis HOM05D000486 ORTHO05D000375 3.9e-06 54.7 37 62.2
Lalb_Chr20g0111631 Lupinus albus HOM05D000486 ORTHO05D000375 3.9e-06 54.7 52 50.0
Aqoxy4G02734 Aquilegia oxysepala HOM05D000486 ORTHO05D000375 5.1e-06 54.3 66 43.9
Gohir.D04G079968 Gossypium hirsutum HOM05D000486 ORTHO05D013772 6.6e-06 53.9 57 45.6
HanXRQChr01g0010141 Helianthus annuus HOM05D000486 ORTHO05D000375 6.6e-06 53.9 57 47.4
GSVIVG01033873001 Vitis vinifera HOM05D000486 ORTHO05D000375 6.6e-06 53.9 60 43.3
Prupe.7G103400 Prunus persica HOM05D000486 ORTHO05D000375 8.6e-06 53.5 52 46.2


User provided reference genes

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