Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 0.0e+00 1203.7 612 100.0
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 1.6e-293 1012.3 566 91.9
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 1.3e-290 1002.7 566 91.2
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 3.0e-207 725.7 533 70.7
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 2.0e-187 659.8 546 68.1
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 8.4e-186 654.4 533 69.6
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 8.2e-149 531.6 532 60.0
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 5.7e-110 402.5 588 42.0
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 1.7e-90 337.8 579 40.4
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 3.0e-90 337.0 550 40.4
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 9.5e-89 332.0 564 39.5
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 4.7e-88 329.7 523 39.8
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 1.4e-87 328.2 561 38.7
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 1.4e-87 328.2 521 39.9
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 5.2e-87 326.2 553 39.4
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 6.8e-87 325.9 545 39.8
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.9e-84 317.8 567 38.4
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 2.4e-84 317.4 521 42.8
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 2.4e-84 317.4 571 38.9
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 2.0e-83 314.3 562 41.6
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 1.0e-82 312.0 559 39.7
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 1.3e-82 311.6 635 33.5
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 8.6e-82 308.9 521 37.4
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.1e-81 308.5 521 37.4
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 7.3e-81 305.8 537 40.0
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 7.3e-81 305.8 531 38.2
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 1.6e-80 304.7 581 38.2
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.4e-79 301.6 519 38.0
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 4.0e-79 300.1 542 40.2
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 6.8e-79 299.3 536 39.4
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 2.6e-78 297.4 546 40.1
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 4.9e-77 293.1 557 38.2
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 1.9e-76 291.2 590 33.6
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 2.4e-76 290.8 576 37.5
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 3.2e-76 290.4 517 36.2
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 3.2e-76 290.4 583 35.2
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 3.2e-76 290.4 579 37.3
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 5.4e-76 289.7 633 34.1
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 5.4e-76 289.7 633 34.1
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 5.4e-76 289.7 614 35.5
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 2.7e-75 287.3 543 38.5
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 4.6e-75 286.6 603 35.8
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 6.0e-75 286.2 535 37.0
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 6.0e-75 286.2 629 36.4
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 6.0e-75 286.2 603 35.2
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 6.0e-75 286.2 582 37.6
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 1.3e-74 285.0 533 35.3
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 1.7e-74 284.6 603 36.0
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 3.0e-74 283.9 572 35.1
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.0e-74 283.9 671 35.9
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 5.1e-74 283.1 594 35.7
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 1.1e-73 282.0 535 35.1
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 3.3e-73 280.4 567 33.7
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 4.3e-73 280.0 558 33.9
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 3.6e-72 276.9 535 35.1
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 4.7e-72 276.6 547 36.6
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 1.1e-71 275.4 524 35.7
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 1.4e-71 275.0 536 33.8
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 1.4e-71 275.0 536 36.6
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 1.8e-71 274.6 695 31.2
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 3.1e-71 273.9 521 35.5
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 4.0e-71 273.5 530 34.7
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 4.0e-71 273.5 536 36.2
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 4.0e-71 273.5 643 33.6
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 5.2e-71 273.1 533 35.5
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 8.9e-71 272.3 627 34.6
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 8.9e-71 272.3 539 36.2
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 8.9e-71 272.3 594 33.8
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 1.2e-70 271.9 644 31.1
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 2.0e-70 271.2 616 32.8
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 2.6e-70 270.8 540 36.3
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 5.8e-70 269.6 524 33.4
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 7.6e-70 269.2 584 33.0
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.3e-69 268.5 703 32.9
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 1.3e-69 268.5 668 31.9
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 1.7e-69 268.1 533 34.9
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 1.7e-69 268.1 533 34.9
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 2.9e-69 267.3 584 35.4
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 4.9e-69 266.5 519 35.1
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 2.4e-68 264.2 588 33.2
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 4.1e-68 263.5 536 34.5
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 1.6e-67 261.5 540 35.9
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 6.0e-67 259.6 680 32.6
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 7.8e-67 259.2 525 35.4
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 3.9e-66 256.9 705 30.6
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 8.7e-66 255.8 683 29.9
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 3.3e-65 253.8 520 35.8
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 1.2e-64 251.9 522 33.3
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 2.1e-64 251.1 695 31.7
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 3.6e-64 250.4 692 30.6
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 4.7e-64 250.0 743 28.7
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 1.8e-63 248.1 715 29.9
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 9.0e-63 245.7 821 27.6
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.7e-61 241.5 694 32.0
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 4.2e-60 236.9 572 33.9
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 4.6e-59 233.4 711 27.3
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 6.6e-58 229.6 709 30.0
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.5e-57 227.6 673 32.7
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 3.4e-54 217.2 526 33.7
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 2.1e-51 208.0 708 26.7
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 1.8e-47 194.9 215 47.0
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 9.9e-46 189.1 228 46.9
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 3.8e-45 187.2 525 26.9
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 6.4e-45 186.4 270 44.1
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 8.4e-45 186.0 414 31.2
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.0e-42 179.1 280 41.1
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.3e-42 178.7 411 34.8
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 5.8e-38 163.3 814 22.9
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 1.6e-35 155.2 181 42.0
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 1.6e-32 145.2 212 35.4
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 1.6e-32 145.2 147 51.0
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 8.2e-32 142.9 208 40.9
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 1.8e-31 141.7 623 24.4
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 3.1e-31 141.0 421 25.4
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 1.2e-30 139.0 94 68.1
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 7.2e-28 129.8 365 30.4
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 2.1e-27 128.3 185 41.1
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 6.1e-27 126.7 397 30.2
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.4e-26 125.6 101 57.4
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 1.3e-21 109.0 198 37.9
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 1.4e-20 105.5 139 46.0
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 1.3e-16 92.4 463 22.0
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.4e-15 88.2 542 25.3
arahy.Tifrunner.gnm1.ann1.AE8L4W Arachis hypogaea HOM05D004666 ORTHO05D005822 2.6e-14 84.7 168 35.1
Haze_16424 Corylus avellana HOM05D004666 ORTHO05D005822 5.9e-14 83.6 180 33.9
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 1.0e-13 82.8 178 31.5
Os07g0454400 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 5.5e-12 77.0 96 46.9
QL04p079053 Quercus lobata HOM05D004666 ORTHO05D005822 4.4e-09 67.4 62 56.5
RcHm_v2.0_Chr7g0223981 Rosa chinensis HOM05D004666 ORTHO05D005822 1.7e-08 65.5 45 64.4
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 4.8e-08 63.9 97 40.2


User provided reference genes

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