Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.3e-112 409.8 216 100.0
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.1e-108 396.7 216 96.3
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 5.5e-108 394.4 216 95.8
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.6e-102 376.3 219 91.3
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 3.1e-95 352.1 218 88.5
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 7.0e-79 297.7 236 74.2
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 8.0e-75 284.3 236 72.5
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 5.6e-68 261.5 237 66.2
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.4e-66 256.9 247 64.0
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.2e-56 223.0 229 60.3
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 9.2e-55 217.6 221 58.8
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 1.3e-53 213.8 222 56.3
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 5.1e-53 211.8 236 55.1
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.1e-50 204.1 244 50.8
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 9.9e-49 197.6 279 48.4
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.3e-48 197.2 214 55.6
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.1e-47 194.1 245 49.4
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 4.1e-47 192.2 230 52.6
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 7.8e-46 188.0 254 48.8
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 1.0e-45 187.6 233 49.4
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 1.0e-45 187.6 229 52.0
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 1.7e-45 186.8 239 49.0
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 6.6e-45 184.9 229 53.3
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 8.6e-45 184.5 230 49.1
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 1.1e-44 184.1 226 51.3
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 1.2e-43 180.6 227 49.3
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 2.1e-43 179.9 212 50.9
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 2.1e-43 179.9 207 55.1
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 3.4e-41 172.6 204 54.4
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 2.2e-40 169.9 220 50.0
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.1e-39 167.5 232 47.4
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 1.9e-39 166.8 224 45.5
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.9e-39 166.8 191 51.3
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 1.2e-38 164.1 214 45.8
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 1.6e-38 163.7 223 48.9
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.7e-38 162.9 172 54.7
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 4.6e-38 162.2 223 48.9
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.3e-37 160.6 223 47.5
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.3e-37 160.6 232 46.6
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 8.7e-37 157.9 248 44.4
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 1.9e-36 156.8 220 47.3
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 5.6e-36 155.2 213 49.3
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.3e-35 154.1 234 43.6
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.6e-35 153.7 223 45.7
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.8e-35 152.9 150 54.7
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.8e-35 152.9 265 41.5
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 4.8e-35 152.1 242 44.2
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 4.8e-35 152.1 223 45.3
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 4.8e-35 152.1 223 45.3
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 8.1e-35 151.4 238 43.3
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 1.8e-34 150.2 216 47.7
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.4e-34 149.8 216 45.8
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.4e-34 149.8 226 43.8
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 2.4e-34 149.8 218 48.2
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 3.1e-34 149.4 217 44.7
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 5.3e-34 148.7 226 44.7
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 9.0e-34 147.9 227 44.5
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.2e-33 147.5 229 46.3
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.2e-33 147.5 231 44.2
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.0e-33 146.7 216 44.9
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.6e-33 146.4 230 46.5
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 3.4e-33 146.0 227 44.1
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 3.4e-33 146.0 226 44.2
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 5.8e-33 145.2 212 45.3
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.2e-32 143.3 209 45.0
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 3.8e-32 142.5 226 44.2
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 3.8e-32 142.5 242 40.5
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 4.9e-32 142.1 176 47.2
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 8.4e-32 141.4 215 42.8
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 2.4e-31 139.8 230 46.5
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.6e-30 137.1 231 42.4
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 2.1e-30 136.7 241 42.3
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 4.6e-30 135.6 231 39.8
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 7.9e-30 134.8 232 40.9
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 2.3e-29 133.3 219 44.3
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.3e-29 133.3 211 40.8
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 2.3e-29 133.3 220 41.8
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.0e-29 132.9 230 43.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 3.9e-29 132.5 215 41.9
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.5e-28 130.6 215 40.0
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 3.3e-28 129.4 202 42.1
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 4.3e-28 129.0 202 42.1
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 4.3e-28 129.0 204 43.1
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 7.4e-28 128.3 211 45.0
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 9.6e-28 127.9 202 41.6
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 9.6e-28 127.9 227 40.1
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.3e-27 127.5 164 53.7
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 2.1e-27 126.7 202 41.1
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 6.2e-27 125.2 208 41.8
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 8.1e-27 124.8 202 41.1
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 8.1e-27 124.8 204 42.6
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 1.4e-26 124.0 202 40.6
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 2.4e-26 123.2 148 45.9
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 3.1e-26 122.9 148 45.9
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 4.0e-26 122.5 216 41.7
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 5.3e-26 122.1 203 40.9
Sopen01g004270 Solanum pennellii HOM05D005900 ORTHO05D007306 3.4e-25 119.4 92 83.7
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.2e-24 116.7 216 37.5
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 3.8e-24 115.9 78 65.4
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 3.8e-24 115.9 212 40.6
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 3.2e-23 112.8 221 41.2
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 1.2e-22 110.9 161 43.5
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 1.6e-22 110.5 183 38.8
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 2.1e-22 110.2 221 42.1
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 4.6e-22 109.0 223 36.8
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.0e-21 107.8 215 37.7
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 8.7e-21 104.8 214 38.3
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.9e-20 103.6 183 42.1
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 2.5e-20 103.2 161 39.8
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 2.1e-19 100.1 231 37.7
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 4.8e-19 99.0 214 39.7
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 6.2e-19 98.6 231 33.3
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 8.1e-19 98.2 249 35.3
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.1e-18 97.8 91 50.5
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.8e-18 97.1 195 40.0
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 4.0e-18 95.9 213 39.4
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 1.7e-16 90.5 213 37.1
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 2.2e-16 90.1 175 36.0
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 8.4e-16 88.2 172 37.2
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 7.9e-14 81.6 155 40.6
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.3e-13 80.9 155 40.6
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 5.1e-13 79.0 68 52.9
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.8e-10 70.5 140 40.0
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 1.8e-10 70.5 236 30.1
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 4.5e-09 65.9 192 32.8
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 1.9e-07 60.5 43 62.8
BcaC01g02700 Brassica carinata HOM05D005900 ORTHO05D007306 4.6e-06 55.8 223 31.4


User provided reference genes

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